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The map label for this gene is p49 [H]

Identifier: 119715210

GI number: 119715210

Start: 1013579

End: 1015165

Strand: Direct

Name: p49 [H]

Synonym: Noca_0965

Alternate gene names: 119715210

Gene position: 1013579-1015165 (Clockwise)

Preceding gene: 119715207

Following gene: 119715213

Centisome position: 20.33

GC content: 77.06

Gene sequence:

>1587_bases
GTGAGCCAGGAGTACGACGCCGTGGTCGTCGGCGCCGGGCCCAACGGGCTGGTCGCCGCCAACCACCTGGTCGACCGCGG
GTGGTCGGTGCTCGTGCTGGAGGCCCAGCCGGACGTCGGCGGCGCCGTCGCCAGCGACCGTGAGGTGCACCCGGACTTCG
TCCACGACACGTTCAGCGCGTTCTACCCGCTCGCCGCGGTGTCGCGCGCCATCCAGGGGTTCGCGCTGGAGGAGCACGGG
CTGCGCTGGACGCACGCGCCCGCCGTCCTCGGCCACCAGCTTCCGGCCGGCGCCTGGGCCCTCCTGCACCGCGACCGCGA
GGTCACCGCCGGCCTGATGGACGCCCAGCACCCCGGCGACGGCGCGGCCTGGCTCGAGCTGTGCGGGGACTGGGACCGGA
TCGGCGGCGCGATCGTGGACGCGCTGCTGACCCCGTTCCCGCCGGTGCGGCCGGGGCTCTCGGTGCTGGCGCGGCTGCGC
TCGGTCGGCGGCCTGCGCTTCGTCCGGGAGCTGCTCACCCCGGCCGCCGACCTGGGTCGGCACCGGTTCGGGGGCGCGGC
GCCGCGGATCCTGCTGGCCGGCAACGCCGGGCACGCCGACATCCCGCTCACCTCGCCCGGCTCCGGCCTGATGGCGCTGC
TGCTGACCATGCTCGGCCAGACCGTGGGCTTCCCCGTCCCGGTCGGTGGCGCCGGGCACTTCGCGCAGGCGCTCGCCGCC
CGGCTGCGGGCGAAGGGCGCCGAGATCCACTGCGCCAGCGAGGTCACGGCGATCGAGGTGGCGGGCGGGCGTGCCGTCGC
GGTGCGGACGGCGGCCGGGGAGCGGTACGCCGCGGGCCACGCGGTGATCGCCGACGTGTCGGCGCCGAGCCTCTACGGCC
GCCTGCTACCGGCCGAGGCGCTCCCCGCCCGGACCCGCGCCGGGATGCGGTCCTTCGAGATGGACCCCCGGACGGTGAAG
GTGGACTGGGCCCTGTCCGGACCGGTCCCGTGGTGGGTGCCTCCGGCGTACGACCCGGGGACCGTGCACGTCGCCGACTC
GGTCGAGGAGATCGGTGCGGCCCTGCACCAGGTCGCGTCGCGGACGATCCCGGCGGCGCCGTTCCTGCTCGCCGGCCAGA
TGACCACGACCGACCCCACCCGCTCGCCGGCGGGGACCGAGTCGATGTGGGCCTACACGCACGTGCCGCAGCAGACGGCG
CACGACGCCGGGGACGGGACCATCCGCGGCGTGTGGGACGAGACGGACTGCGAGCGCTTCGCCGACCGGATGCAGGCCCG
CATCGAGGGTCTCGCGCCCGGGTTCGGCGACCGGGTGCTCGCCCGCCGGGTGCTCGGGCCGCACGAGCTGGAGGCCCGCG
ACGCCAACCTCGTGGGCGGTGGCCTCAACGGGGGTACGGCGCAGCTGCACCAGCAGCTGGTGTTCCGTCCGGTGCCCGGC
CTCGGGCGGGCCGAGACGCCCGTGCGCGGGCTCTACCTCGGCTCAGCGGCTGCGCACCCCGGCGGCGGCGTGCACGGCGC
GCCCGGCACGAATGCCGCCCGCGCCGCGCTCGCCCACCGCCGGGCGCGCTTCCTGGTCCGCCGCTGA

Upstream 100 bases:

>100_bases
GGTCACGCAGCCATTCTCCCAGGTGGCCGAAGGCGGCGACCGAAGCGGCCGCTGCGCCGCCGCGCTGCATGGGGCGGACG
TCGCCGGGTACCGTCGAGCG

Downstream 100 bases:

>100_bases
GGACCGGTCAGGGGGTGACCGACGGGTCCGCGACCGGAGTCGTCGGGGTGTCCGTCGGGGTGTCCGTCGGGGTGTCTGTC
GGGGTCTCGGTGGGCGACTG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MSQEYDAVVVGAGPNGLVAANHLVDRGWSVLVLEAQPDVGGAVASDREVHPDFVHDTFSAFYPLAAVSRAIQGFALEEHG
LRWTHAPAVLGHQLPAGAWALLHRDREVTAGLMDAQHPGDGAAWLELCGDWDRIGGAIVDALLTPFPPVRPGLSVLARLR
SVGGLRFVRELLTPAADLGRHRFGGAAPRILLAGNAGHADIPLTSPGSGLMALLLTMLGQTVGFPVPVGGAGHFAQALAA
RLRAKGAEIHCASEVTAIEVAGGRAVAVRTAAGERYAAGHAVIADVSAPSLYGRLLPAEALPARTRAGMRSFEMDPRTVK
VDWALSGPVPWWVPPAYDPGTVHVADSVEEIGAALHQVASRTIPAAPFLLAGQMTTTDPTRSPAGTESMWAYTHVPQQTA
HDAGDGTIRGVWDETDCERFADRMQARIEGLAPGFGDRVLARRVLGPHELEARDANLVGGGLNGGTAQLHQQLVFRPVPG
LGRAETPVRGLYLGSAAAHPGGGVHGAPGTNAARAALAHRRARFLVRR

Sequences:

>Translated_528_residues
MSQEYDAVVVGAGPNGLVAANHLVDRGWSVLVLEAQPDVGGAVASDREVHPDFVHDTFSAFYPLAAVSRAIQGFALEEHG
LRWTHAPAVLGHQLPAGAWALLHRDREVTAGLMDAQHPGDGAAWLELCGDWDRIGGAIVDALLTPFPPVRPGLSVLARLR
SVGGLRFVRELLTPAADLGRHRFGGAAPRILLAGNAGHADIPLTSPGSGLMALLLTMLGQTVGFPVPVGGAGHFAQALAA
RLRAKGAEIHCASEVTAIEVAGGRAVAVRTAAGERYAAGHAVIADVSAPSLYGRLLPAEALPARTRAGMRSFEMDPRTVK
VDWALSGPVPWWVPPAYDPGTVHVADSVEEIGAALHQVASRTIPAAPFLLAGQMTTTDPTRSPAGTESMWAYTHVPQQTA
HDAGDGTIRGVWDETDCERFADRMQARIEGLAPGFGDRVLARRVLGPHELEARDANLVGGGLNGGTAQLHQQLVFRPVPG
LGRAETPVRGLYLGSAAAHPGGGVHGAPGTNAARAALAHRRARFLVRR
>Mature_527_residues
SQEYDAVVVGAGPNGLVAANHLVDRGWSVLVLEAQPDVGGAVASDREVHPDFVHDTFSAFYPLAAVSRAIQGFALEEHGL
RWTHAPAVLGHQLPAGAWALLHRDREVTAGLMDAQHPGDGAAWLELCGDWDRIGGAIVDALLTPFPPVRPGLSVLARLRS
VGGLRFVRELLTPAADLGRHRFGGAAPRILLAGNAGHADIPLTSPGSGLMALLLTMLGQTVGFPVPVGGAGHFAQALAAR
LRAKGAEIHCASEVTAIEVAGGRAVAVRTAAGERYAAGHAVIADVSAPSLYGRLLPAEALPARTRAGMRSFEMDPRTVKV
DWALSGPVPWWVPPAYDPGTVHVADSVEEIGAALHQVASRTIPAAPFLLAGQMTTTDPTRSPAGTESMWAYTHVPQQTAH
DAGDGTIRGVWDETDCERFADRMQARIEGLAPGFGDRVLARRVLGPHELEARDANLVGGGLNGGTAQLHQQLVFRPVPGL
GRAETPVRGLYLGSAAAHPGGGVHGAPGTNAARAALAHRRARFLVRR

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=562, Percent_Identity=28.8256227758007, Blast_Score=122, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17540238, Length=551, Percent_Identity=25.2268602540835, Blast_Score=121, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55316; Mature: 55185

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQEYDAVVVGAGPNGLVAANHLVDRGWSVLVLEAQPDVGGAVASDREVHPDFVHDTFSA
CCCCCCEEEEECCCCCCEEHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
FYPLAAVSRAIQGFALEEHGLRWTHAPAVLGHQLPAGAWALLHRDREVTAGLMDAQHPGD
HHHHHHHHHHHHCCCHHHCCCEEECCHHHHHCCCCCCHHHHHHCCHHHHHHHHCCCCCCC
GAAWLELCGDWDRIGGAIVDALLTPFPPVRPGLSVLARLRSVGGLRFVRELLTPAADLGR
CHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHH
HRFGGAAPRILLAGNAGHADIPLTSPGSGLMALLLTMLGQTVGFPVPVGGAGHFAQALAA
HHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
RLRAKGAEIHCASEVTAIEVAGGRAVAVRTAAGERYAAGHAVIADVSAPSLYGRLLPAEA
HHHHCCCCEEECCCCEEEEECCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHCCCHH
LPARTRAGMRSFEMDPRTVKVDWALSGPVPWWVPPAYDPGTVHVADSVEEIGAALHQVAS
CCHHHHHCCHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHH
RTIPAAPFLLAGQMTTTDPTRSPAGTESMWAYTHVPQQTAHDAGDGTIRGVWDETDCERF
CCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCEEECCCCHHHHHH
ADRMQARIEGLAPGFGDRVLARRVLGPHELEARDANLVGGGLNGGTAQLHQQLVFRPVPG
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCC
LGRAETPVRGLYLGSAAAHPGGGVHGAPGTNAARAALAHRRARFLVRR
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQEYDAVVVGAGPNGLVAANHLVDRGWSVLVLEAQPDVGGAVASDREVHPDFVHDTFSA
CCCCCEEEEECCCCCCEEHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
FYPLAAVSRAIQGFALEEHGLRWTHAPAVLGHQLPAGAWALLHRDREVTAGLMDAQHPGD
HHHHHHHHHHHHCCCHHHCCCEEECCHHHHHCCCCCCHHHHHHCCHHHHHHHHCCCCCCC
GAAWLELCGDWDRIGGAIVDALLTPFPPVRPGLSVLARLRSVGGLRFVRELLTPAADLGR
CHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHH
HRFGGAAPRILLAGNAGHADIPLTSPGSGLMALLLTMLGQTVGFPVPVGGAGHFAQALAA
HHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
RLRAKGAEIHCASEVTAIEVAGGRAVAVRTAAGERYAAGHAVIADVSAPSLYGRLLPAEA
HHHHCCCCEEECCCCEEEEECCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHCCCHH
LPARTRAGMRSFEMDPRTVKVDWALSGPVPWWVPPAYDPGTVHVADSVEEIGAALHQVAS
CCHHHHHCCHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHH
RTIPAAPFLLAGQMTTTDPTRSPAGTESMWAYTHVPQQTAHDAGDGTIRGVWDETDCERF
CCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCEEECCCCHHHHHH
ADRMQARIEGLAPGFGDRVLARRVLGPHELEARDANLVGGGLNGGTAQLHQQLVFRPVPG
HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCC
LGRAETPVRGLYLGSAAAHPGGGVHGAPGTNAARAALAHRRARFLVRR
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]