Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119715143
Identifier: 119715143
GI number: 119715143
Start: 938044
End: 938970
Strand: Reverse
Name: 119715143
Synonym: Noca_0898
Alternate gene names: NA
Gene position: 938970-938044 (Counterclockwise)
Preceding gene: 119715149
Following gene: 119715140
Centisome position: 18.83
GC content: 71.09
Gene sequence:
>927_bases ATGAACGAAGTCCTCGAAGCACTCATCGCGGCACAAGCGGGAATGGTTGCCCGCCGACAGCTGAACAGGCTGGGCATCGA CTGGGACCGGGTGCGCGACCATGGCGCGGCCCGTCGGTGGGTGGAGCGGACGCCTCGCGTGATCAGCACCGTGACCGGCG AGCTGACCCGCGCACAGCTCGAGTGGCTGGCGGTGCTGCACGCGGGTGAGCGCAGCATGCTCGGCGGCCTGACCGCTGCG GAGCGCCACGGCCTCACCGGGTGGCAACGCGACGTCATGACCGTCTACGTCGACGACGAGCTGAGCTTCGAACCGGTGGA CGGTGTCCGGTTCTTCCGCAGTCGCCGCCCCTTCGACCTGCTCCGTCACCCCCGCCCGGGGATCCCGGTCTGTCGCCTCG AGCCGGCCGTCCTCCTGTTCGCCGCGTACCAGACCACCCCACGGCCGGCGCACGGCGTCATCGCCGCCAGCATCCAGCAG CGGCTCACCACCGTCGAGCGCATGGTGGAGTGGGTCGACACCCTGCGTCCGCTGCGCTGGTCCAAGCCGTTCAAGCGCAC CCTGGGCGACATCGCCGGCGGCGCCCATTCCGGGGCCGAGATCGACGTGCGCCGGATGTGTCGCCGGTTCGGGATCGGGA TGCCGGACGGCCAGGTGTCGCGGACAGATCGGGCTGGTTGCCGGCGCTGGACCGATTGCGAGTGGCGGCTGCCCGACGGT CGAGTCGTGGTGCTCGAGGTCGACGGCTCCTTCCACCTCGACGTGCTGGAGTCGATGGCGGACCACCGGCGGGCTCGCCG GCTCACGACCGCGACCCGCGTGGTGCTGCGGTGCTCGGCGTACGAGCTGCGCTACGAGTCCGAGCAGGTCGCCGCCGACC TGATCGCGCTCGGGTTGCCGGGTCGTGTGCCCCACAACGCGGCATAG
Upstream 100 bases:
>100_bases CGTGTGCCTGAGAACGCGCCATGGCGCGTTCTCAGGCACACGACCCGACGCCTGTGGAGAGCGACCCGGACCCGTGCCGG ATCGGGGAAGGAGAGCTGGC
Downstream 100 bases:
>100_bases CGCGTCCTCAGGCACACGACCCGACCTCAAGCCGGTCAGGACTCGAGGACCACCACCGCCGAGGCGATGCCGGCGTCGTG GGAGAGCGAGACGTGCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MNEVLEALIAAQAGMVARRQLNRLGIDWDRVRDHGAARRWVERTPRVISTVTGELTRAQLEWLAVLHAGERSMLGGLTAA ERHGLTGWQRDVMTVYVDDELSFEPVDGVRFFRSRRPFDLLRHPRPGIPVCRLEPAVLLFAAYQTTPRPAHGVIAASIQQ RLTTVERMVEWVDTLRPLRWSKPFKRTLGDIAGGAHSGAEIDVRRMCRRFGIGMPDGQVSRTDRAGCRRWTDCEWRLPDG RVVVLEVDGSFHLDVLESMADHRRARRLTTATRVVLRCSAYELRYESEQVAADLIALGLPGRVPHNAA
Sequences:
>Translated_308_residues MNEVLEALIAAQAGMVARRQLNRLGIDWDRVRDHGAARRWVERTPRVISTVTGELTRAQLEWLAVLHAGERSMLGGLTAA ERHGLTGWQRDVMTVYVDDELSFEPVDGVRFFRSRRPFDLLRHPRPGIPVCRLEPAVLLFAAYQTTPRPAHGVIAASIQQ RLTTVERMVEWVDTLRPLRWSKPFKRTLGDIAGGAHSGAEIDVRRMCRRFGIGMPDGQVSRTDRAGCRRWTDCEWRLPDG RVVVLEVDGSFHLDVLESMADHRRARRLTTATRVVLRCSAYELRYESEQVAADLIALGLPGRVPHNAA >Mature_308_residues MNEVLEALIAAQAGMVARRQLNRLGIDWDRVRDHGAARRWVERTPRVISTVTGELTRAQLEWLAVLHAGERSMLGGLTAA ERHGLTGWQRDVMTVYVDDELSFEPVDGVRFFRSRRPFDLLRHPRPGIPVCRLEPAVLLFAAYQTTPRPAHGVIAASIQQ RLTTVERMVEWVDTLRPLRWSKPFKRTLGDIAGGAHSGAEIDVRRMCRRFGIGMPDGQVSRTDRAGCRRWTDCEWRLPDG RVVVLEVDGSFHLDVLESMADHRRARRLTTATRVVLRCSAYELRYESEQVAADLIALGLPGRVPHNAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34810; Mature: 34810
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEVLEALIAAQAGMVARRQLNRLGIDWDRVRDHGAARRWVERTPRVISTVTGELTRAQL CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH EWLAVLHAGERSMLGGLTAAERHGLTGWQRDVMTVYVDDELSFEPVDGVRFFRSRRPFDL HHHHHHHCCCHHHHCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCHHH LRHPRPGIPVCRLEPAVLLFAAYQTTPRPAHGVIAASIQQRLTTVERMVEWVDTLRPLRW HCCCCCCCCEEEECHHHHEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SKPFKRTLGDIAGGAHSGAEIDVRRMCRRFGIGMPDGQVSRTDRAGCRRWTDCEWRLPDG CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCEECCCC RVVVLEVDGSFHLDVLESMADHRRARRLTTATRVVLRCSAYELRYESEQVAADLIALGLP CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC GRVPHNAA CCCCCCCC >Mature Secondary Structure MNEVLEALIAAQAGMVARRQLNRLGIDWDRVRDHGAARRWVERTPRVISTVTGELTRAQL CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH EWLAVLHAGERSMLGGLTAAERHGLTGWQRDVMTVYVDDELSFEPVDGVRFFRSRRPFDL HHHHHHHCCCHHHHCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCHHH LRHPRPGIPVCRLEPAVLLFAAYQTTPRPAHGVIAASIQQRLTTVERMVEWVDTLRPLRW HCCCCCCCCEEEECHHHHEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SKPFKRTLGDIAGGAHSGAEIDVRRMCRRFGIGMPDGQVSRTDRAGCRRWTDCEWRLPDG CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCEECCCC RVVVLEVDGSFHLDVLESMADHRRARRLTTATRVVLRCSAYELRYESEQVAADLIALGLP CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC GRVPHNAA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA