| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is folD1
Identifier: 119714889
GI number: 119714889
Start: 678430
End: 679320
Strand: Reverse
Name: folD1
Synonym: Noca_0641
Alternate gene names: 119714889
Gene position: 679320-678430 (Counterclockwise)
Preceding gene: 119714892
Following gene: 119714888
Centisome position: 13.62
GC content: 61.84
Gene sequence:
>891_bases GTGGATCGCAAGGCAACCGTCATCGACGGGAAGCTGGCTGCGCAGCACGTCAAAGATTCCCTGCGCACGCGCGTCGCTGC ACTTGAAGCGATTGGTCAGCGTCCAGGCCTCGGAACGATCCTTGTCGGCGATGACGCTGGCTCGCAGTCGTACGTCGCCG GGAAGCATCGCGACTGTGCGGAAGTAGGGATCGACTCTTTCCGGATTGACATGTCCGCGGAGGCGTCTCAGGAGCGCGTC TTGGATGCCGTTGGACGTCTGAACGAAGACGAGCGTTGCTCCGGATTCATCGTGCAACTTCCATTGCCGGCACACATCGA CATGCACCTCGTTCTGAACGCCATTGATCCCGAAAAGGATGCCGATGGTCTGCACCCAGTGAACCTGGGTCGTCTCGTTC TGAACCAGGAAGGAACGCTGCCCTGTACCCCTCGCGGGATCCTTGAGTTGCTGCGCGGCAACGACGTTCCGATCACAGGG TCTCAGTTTTGCGTGATCGGGTGCGGCACCACGGTGGGTCGTCCGCTCGGGCTCATGCTCACGCGACCGAGCGAGCATGC GACGGTCACCATGGTGAACGAGGCGACCATCGATGTCGCTGCGCACACGCGCGTTGCCGACGTCGTGATTGCTGCCGCAG GAGTGGCCAACCTCGTCAAGCCGTACTGGATCAAGCCCGGCGCCACTGTTCTCTCGGTCGGGATCACTCGCACTGTTGAA GGAATTCTTGGAGACGTCGATCCGGGTGTCGAGAATGTCGCAGGGAAGTGGACACGCGCCGCGGGCGGGGTCGGCCCGAT GACTCGCGCCATGCTCCTCAAGAACGTCGTAGAACTCGCCGAACGCGCAGCGGGCATCACTTCAGAAGCCAGCACCAAGA TCGCGTCCTGA
Upstream 100 bases:
>100_bases CGTGCGCGTTCTATTCACTCCCGCGTCCAGCGAGTCGATAGCAATCATCGTGCGCGTGGGATCTGCCACAGCACACGCGG ATGACAGAAAGGGCGACCTG
Downstream 100 bases:
>100_bases CGAAGCACCCGAAAGCGAAACCAGCACGTGAACATTGTCGTCTGTGTGAAGTACGTCCCCGACGCCACTGCCGATCGGCA GTTCGAGTCGGACAACACCC
Product: methenyltetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MDRKATVIDGKLAAQHVKDSLRTRVAALEAIGQRPGLGTILVGDDAGSQSYVAGKHRDCAEVGIDSFRIDMSAEASQERV LDAVGRLNEDERCSGFIVQLPLPAHIDMHLVLNAIDPEKDADGLHPVNLGRLVLNQEGTLPCTPRGILELLRGNDVPITG SQFCVIGCGTTVGRPLGLMLTRPSEHATVTMVNEATIDVAAHTRVADVVIAAAGVANLVKPYWIKPGATVLSVGITRTVE GILGDVDPGVENVAGKWTRAAGGVGPMTRAMLLKNVVELAERAAGITSEASTKIAS
Sequences:
>Translated_296_residues MDRKATVIDGKLAAQHVKDSLRTRVAALEAIGQRPGLGTILVGDDAGSQSYVAGKHRDCAEVGIDSFRIDMSAEASQERV LDAVGRLNEDERCSGFIVQLPLPAHIDMHLVLNAIDPEKDADGLHPVNLGRLVLNQEGTLPCTPRGILELLRGNDVPITG SQFCVIGCGTTVGRPLGLMLTRPSEHATVTMVNEATIDVAAHTRVADVVIAAAGVANLVKPYWIKPGATVLSVGITRTVE GILGDVDPGVENVAGKWTRAAGGVGPMTRAMLLKNVVELAERAAGITSEASTKIAS >Mature_296_residues MDRKATVIDGKLAAQHVKDSLRTRVAALEAIGQRPGLGTILVGDDAGSQSYVAGKHRDCAEVGIDSFRIDMSAEASQERV LDAVGRLNEDERCSGFIVQLPLPAHIDMHLVLNAIDPEKDADGLHPVNLGRLVLNQEGTLPCTPRGILELLRGNDVPITG SQFCVIGCGTTVGRPLGLMLTRPSEHATVTMVNEATIDVAAHTRVADVVIAAAGVANLVKPYWIKPGATVLSVGITRTVE GILGDVDPGVENVAGKWTRAAGGVGPMTRAMLLKNVVELAERAAGITSEASTKIAS
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI94721354, Length=295, Percent_Identity=41.6949152542373, Blast_Score=195, Evalue=4e-50, Organism=Homo sapiens, GI222418558, Length=295, Percent_Identity=39.3220338983051, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI222136639, Length=294, Percent_Identity=35.7142857142857, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI36796743, Length=202, Percent_Identity=27.7227722772277, Blast_Score=79, Evalue=6e-15, Organism=Escherichia coli, GI1786741, Length=279, Percent_Identity=40.8602150537634, Blast_Score=181, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17568735, Length=258, Percent_Identity=36.4341085271318, Blast_Score=136, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6321643, Length=301, Percent_Identity=36.5448504983389, Blast_Score=159, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6319558, Length=288, Percent_Identity=34.0277777777778, Blast_Score=155, Evalue=8e-39, Organism=Drosophila melanogaster, GI17136818, Length=294, Percent_Identity=37.7551020408163, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI17136816, Length=294, Percent_Identity=37.7551020408163, Blast_Score=187, Evalue=6e-48, Organism=Drosophila melanogaster, GI24645718, Length=291, Percent_Identity=39.8625429553265, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI17137370, Length=291, Percent_Identity=39.8625429553265, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI62472483, Length=291, Percent_Identity=39.8625429553265, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI45551871, Length=291, Percent_Identity=39.8625429553265, Blast_Score=179, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD1_NOCSJ (A1SED2)
Other databases:
- EMBL: CP000509 - RefSeq: YP_921854.1 - ProteinModelPortal: A1SED2 - SMR: A1SED2 - STRING: A1SED2 - GeneID: 4596058 - GenomeReviews: CP000509_GR - KEGG: nca:Noca_0641 - eggNOG: COG0190 - HOGENOM: HBG328751 - OMA: HTKIADI - BioCyc: NSP35761:NOCA_0641-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 31055; Mature: 31055
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRKATVIDGKLAAQHVKDSLRTRVAALEAIGQRPGLGTILVGDDAGSQSYVAGKHRDCA CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCCCCHH EVGIDSFRIDMSAEASQERVLDAVGRLNEDERCSGFIVQLPLPAHIDMHLVLNAIDPEKD HHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCC ADGLHPVNLGRLVLNQEGTLPCTPRGILELLRGNDVPITGSQFCVIGCGTTVGRPLGLML CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEE TRPSEHATVTMVNEATIDVAAHTRVADVVIAAAGVANLVKPYWIKPGATVLSVGITRTVE ECCCCCEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEHHHHHHHH GILGDVDPGVENVAGKWTRAAGGVGPMTRAMLLKNVVELAERAAGITSEASTKIAS HHHCCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC >Mature Secondary Structure MDRKATVIDGKLAAQHVKDSLRTRVAALEAIGQRPGLGTILVGDDAGSQSYVAGKHRDCA CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCCCCHH EVGIDSFRIDMSAEASQERVLDAVGRLNEDERCSGFIVQLPLPAHIDMHLVLNAIDPEKD HHCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCC ADGLHPVNLGRLVLNQEGTLPCTPRGILELLRGNDVPITGSQFCVIGCGTTVGRPLGLML CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCEEEE TRPSEHATVTMVNEATIDVAAHTRVADVVIAAAGVANLVKPYWIKPGATVLSVGITRTVE ECCCCCEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEHHHHHHHH GILGDVDPGVENVAGKWTRAAGGVGPMTRAMLLKNVVELAERAAGITSEASTKIAS HHHCCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA