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The map label for this gene is etfB [H]

Identifier: 119714888

GI number: 119714888

Start: 677602

End: 678402

Strand: Reverse

Name: etfB [H]

Synonym: Noca_0640

Alternate gene names: 119714888

Gene position: 678402-677602 (Counterclockwise)

Preceding gene: 119714889

Following gene: 119714887

Centisome position: 13.61

GC content: 70.29

Gene sequence:

>801_bases
GTGAACATTGTCGTCTGTGTGAAGTACGTCCCCGACGCCACTGCCGATCGGCAGTTCGAGTCGGACAACACCCTGGACCG
CGTCGGCGTCGACGGGCTCCTCTCGGAGCTCGACGAGTACGCCGTCGAGCAGGCCCTCCAGCTCAAGGAGAAGGCCGGCG
GCGATGACACCATCGTCACCGCGCTGTGCGTCGGGCCCGAGAAGGCCGTCGACGCGGTGCGCAAGGCGCTGCAGATGGGT
GCCGACCAGGGCATCCACGTCGTCGACGACGCCGTCGCTGGCTCCGACGCGCCCGCCACCTCGCTGGTGCTGGCCAAGGC
CGTCGAGAAGGCGGGTGCGGACAAGCCGGTCGACCTGGTCGTGTGCGGCATGTCCTCGACCGACGCCGACATGAGCGTGG
TGCCGGCGATGCTCGCCGAGCGCCTGGACCTGCCCCAGGTCACCCTCGCGTCGGTCATCGAGACGCAGGGAGCACAGGTG
CGCGTCAAGCGCGACGGTGACACCGCGACCGAGGTCATCGGCGCCACGATGCCGCTGGTCCTCTCGGTCACCGACCAGTC
GGGCGAGGCCCGCTACCCGTCCTTCAAGGGCATCATGGCCGCGAAGAAGAAGCCGCTGGAGACCTGGTCGCTGGCGGACC
TGGGCGTCGACGCGGGCCAGGTCGGCCTGTCGGTGGCCTGGACCGAGGTCGCCGAGACCACGGCCCGCCCGCCGCGCACC
GCCGGCGAGATCGTCAAGGACGAGGACGGCTCGGGCGCCACGGCGCTGGCCGGGTTCCTCGCCTCGAAGAAGTTCATCTG
A

Upstream 100 bases:

>100_bases
CAAGAACGTCGTAGAACTCGCCGAACGCGCAGCGGGCATCACTTCAGAAGCCAGCACCAAGATCGCGTCCTGACGAAGCA
CCCGAAAGCGAAACCAGCAC

Downstream 100 bases:

>100_bases
GGAGCTGACCGATGTCTGAAGTTCTCGTTCTCATCGACCACGTCGACGGCGCGGTGCGCAAGCCGACGTACGAGCTCCTG
ACCATCGCCAAGCGGCTCGG

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MNIVVCVKYVPDATADRQFESDNTLDRVGVDGLLSELDEYAVEQALQLKEKAGGDDTIVTALCVGPEKAVDAVRKALQMG
ADQGIHVVDDAVAGSDAPATSLVLAKAVEKAGADKPVDLVVCGMSSTDADMSVVPAMLAERLDLPQVTLASVIETQGAQV
RVKRDGDTATEVIGATMPLVLSVTDQSGEARYPSFKGIMAAKKKPLETWSLADLGVDAGQVGLSVAWTEVAETTARPPRT
AGEIVKDEDGSGATALAGFLASKKFI

Sequences:

>Translated_266_residues
MNIVVCVKYVPDATADRQFESDNTLDRVGVDGLLSELDEYAVEQALQLKEKAGGDDTIVTALCVGPEKAVDAVRKALQMG
ADQGIHVVDDAVAGSDAPATSLVLAKAVEKAGADKPVDLVVCGMSSTDADMSVVPAMLAERLDLPQVTLASVIETQGAQV
RVKRDGDTATEVIGATMPLVLSVTDQSGEARYPSFKGIMAAKKKPLETWSLADLGVDAGQVGLSVAWTEVAETTARPPRT
AGEIVKDEDGSGATALAGFLASKKFI
>Mature_266_residues
MNIVVCVKYVPDATADRQFESDNTLDRVGVDGLLSELDEYAVEQALQLKEKAGGDDTIVTALCVGPEKAVDAVRKALQMG
ADQGIHVVDDAVAGSDAPATSLVLAKAVEKAGADKPVDLVVCGMSSTDADMSVVPAMLAERLDLPQVTLASVIETQGAQV
RVKRDGDTATEVIGATMPLVLSVTDQSGEARYPSFKGIMAAKKKPLETWSLADLGVDAGQVGLSVAWTEVAETTARPPRT
AGEIVKDEDGSGATALAGFLASKKFI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=244, Percent_Identity=35.655737704918, Blast_Score=104, Evalue=8e-23,
Organism=Homo sapiens, GI62420877, Length=198, Percent_Identity=37.8787878787879, Blast_Score=101, Evalue=6e-22,
Organism=Escherichia coli, GI87081682, Length=262, Percent_Identity=32.4427480916031, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI2367123, Length=257, Percent_Identity=31.5175097276265, Blast_Score=89, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI25141345, Length=269, Percent_Identity=35.6877323420074, Blast_Score=114, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6321646, Length=215, Percent_Identity=31.1627906976744, Blast_Score=80, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24651147, Length=250, Percent_Identity=34.4, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24651145, Length=250, Percent_Identity=34.4, Blast_Score=95, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27673; Mature: 27673

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVVCVKYVPDATADRQFESDNTLDRVGVDGLLSELDEYAVEQALQLKEKAGGDDTIVT
CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
ALCVGPEKAVDAVRKALQMGADQGIHVVDDAVAGSDAPATSLVLAKAVEKAGADKPVDLV
EEECCCHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEE
VCGMSSTDADMSVVPAMLAERLDLPQVTLASVIETQGAQVRVKRDGDTATEVIGATMPLV
EECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCEE
LSVTDQSGEARYPSFKGIMAAKKKPLETWSLADLGVDAGQVGLSVAWTEVAETTARPPRT
EEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCHHCHHHHHHHHHHHCCCCCCC
AGEIVKDEDGSGATALAGFLASKKFI
CHHHCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MNIVVCVKYVPDATADRQFESDNTLDRVGVDGLLSELDEYAVEQALQLKEKAGGDDTIVT
CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
ALCVGPEKAVDAVRKALQMGADQGIHVVDDAVAGSDAPATSLVLAKAVEKAGADKPVDLV
EEECCCHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEE
VCGMSSTDADMSVVPAMLAERLDLPQVTLASVIETQGAQVRVKRDGDTATEVIGATMPLV
EECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCEE
LSVTDQSGEARYPSFKGIMAAKKKPLETWSLADLGVDAGQVGLSVAWTEVAETTARPPRT
EEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCHHCHHHHHHHHHHHCCCCCCC
AGEIVKDEDGSGATALAGFLASKKFI
CHHHCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]