Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is cmk [H]

Identifier: 119386491

GI number: 119386491

Start: 920022

End: 920606

Strand: Direct

Name: cmk [H]

Synonym: Pden_3784

Alternate gene names: 119386491

Gene position: 920022-920606 (Clockwise)

Preceding gene: 119386488

Following gene: 119386492

Centisome position: 53.18

GC content: 73.5

Gene sequence:

>585_bases
ATGTCCTTTACCATCGCTATCGACGGACCCGCCGCTTCGGGCAAGGGGACGATCGCGCGGGCGCTTGCCCGGCATTTCGG
CTTTGCCCATCTGGATACGGGGCTGCTTTATCGCGCCGTCGGCGCCAAGGGCGGCGATCCCGTCGCGGCCGCCCGCGCGC
TTGCCCCCGAGGACCTGGCCCGCGACGATCTGCGCAGCGCCGAGGCCGGCCAGGCCGCCAGCCGTGTCGCCGCGATCCCC
GAGGTGCGCGCCGCGCTGGTCGAATTCCAGCGCCGCTTCGCCCGCTCCGAGCCGGGCGCGGTGCTGGACGGGCGCGACAT
CGGCACGGTGATCTGCCCCGAGGCCGAGCTGAAGCTTTATGTCACGGCCAGCGATGCAGTGCGCGCCCGCCGCCGGGCGC
TGGAACTGGGTGCCGACGAGGCCCGGATCCTGGTCGAACTGCGCGAGCGGGACGCCCGCGACGCCGCCCGCGACGTGGCG
CCGATGCGCCCGGCCGAGGATGCGCTGCTGCTCGACACCACCGAGATGAGCATCGACGAGGCCGTGGCGCGCGCCATCGC
CTGCGCCAAGGAGGCCGGAGCATGA

Upstream 100 bases:

>100_bases
GCGGATGCCGCCGGGGTTCCCGCGGATCTGCGGCCTGAACGGTCTCGGGTCCGGCAGGCGGGGTCCCGGCTCTGGCGTCG
CCGCCAGAACCTGAGGTCCC

Downstream 100 bases:

>100_bases
GCCCGCGCTTCCAGCTTTCCGACCTGCGCGTGCCGGTGATCCAGGCGCCGATGGCCGGCACTGCGACGCCGCATCTTGCC
GCCGAGGTCGGCCGGGCAGG

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSFTIAIDGPAASGKGTIARALARHFGFAHLDTGLLYRAVGAKGGDPVAAARALAPEDLARDDLRSAEAGQAASRVAAIP
EVRAALVEFQRRFARSEPGAVLDGRDIGTVICPEAELKLYVTASDAVRARRRALELGADEARILVELRERDARDAARDVA
PMRPAEDALLLDTTEMSIDEAVARAIACAKEAGA

Sequences:

>Translated_194_residues
MSFTIAIDGPAASGKGTIARALARHFGFAHLDTGLLYRAVGAKGGDPVAAARALAPEDLARDDLRSAEAGQAASRVAAIP
EVRAALVEFQRRFARSEPGAVLDGRDIGTVICPEAELKLYVTASDAVRARRRALELGADEARILVELRERDARDAARDVA
PMRPAEDALLLDTTEMSIDEAVARAIACAKEAGA
>Mature_193_residues
SFTIAIDGPAASGKGTIARALARHFGFAHLDTGLLYRAVGAKGGDPVAAARALAPEDLARDDLRSAEAGQAASRVAAIPE
VRAALVEFQRRFARSEPGAVLDGRDIGTVICPEAELKLYVTASDAVRARRRALELGADEARILVELRERDARDAARDVAP
MRPAEDALLLDTTEMSIDEAVARAIACAKEAGA

Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]

COG id: COG0283

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787139, Length=218, Percent_Identity=38.5321100917431, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000850
- InterPro:   IPR003136
- InterPro:   IPR011994 [H]

Pfam domain/function: PF00406 ADK; PF02224 Cytidylate_kin [H]

EC number: =2.7.4.14 [H]

Molecular weight: Translated: 20430; Mature: 20299

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTIAIDGPAASGKGTIARALARHFGFAHLDTGLLYRAVGAKGGDPVAAARALAPEDLA
CEEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHH
RDDLRSAEAGQAASRVAAIPEVRAALVEFQRRFARSEPGAVLDGRDIGTVICPEAELKLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEECCCCCEEEE
VTASDAVRARRRALELGADEARILVELRERDARDAARDVAPMRPAEDALLLDTTEMSIDE
EECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHH
AVARAIACAKEAGA
HHHHHHHHHHHCCC
>Mature Secondary Structure 
SFTIAIDGPAASGKGTIARALARHFGFAHLDTGLLYRAVGAKGGDPVAAARALAPEDLA
EEEEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHH
RDDLRSAEAGQAASRVAAIPEVRAALVEFQRRFARSEPGAVLDGRDIGTVICPEAELKLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEECCCCCEEEE
VTASDAVRARRRALELGADEARILVELRERDARDAARDVAPMRPAEDALLLDTTEMSIDE
EECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHH
AVARAIACAKEAGA
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10511537 [H]