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The map label for this gene is pcaC [H]

Identifier: 119386203

GI number: 119386203

Start: 639003

End: 639434

Strand: Direct

Name: pcaC [H]

Synonym: Pden_3492

Alternate gene names: 119386203

Gene position: 639003-639434 (Clockwise)

Preceding gene: 119386202

Following gene: 119386204

Centisome position: 36.93

GC content: 67.36

Gene sequence:

>432_bases
ATGTCTGATTGCCCCGTCCCCGACCATGGCGTCCCCGACCATCCCGTCCCCGACCGCCATGCGACCGGCATGAAAACCCG
CCGCGAGGTGCTGGGTGATACGCATGTGGACCGGGCCGAAGAGCAGACCTCGGATCTCGACCGGCCGTTCCAGGACCTGA
TCACGATATCCGCCTGGGGCACGGTCTGGGCCTCGGACGGCATCAGCCGGCGCGAGCGTTCCATGCTGACGCTGGCGCTG
CTGGCGGCGACCGGCAACTGGGAGGAGATCCCCATGCATATCCGCGCCACCGCCCGCACCGGAGCCAGCCGGCGCGACGT
CGTCGAGGCGTTCCAGCATGTCGCCATCTATTGCGGCGTGCCCAGGGCGAACCACGCGCTGAAACTGGCCAAGCAGACCT
TTGCCGAGATGGAAGAGGAGGAGAGCCGATGA

Upstream 100 bases:

>100_bases
GCGCGCTTCGACCTGATCGCGGATGCCGCGCATATTCCCTGCGTGGAGGCGCCCGCCGCCCATGCGGCCATCCTCAACCG
TTTTTTCAAGGACATCGGCC

Downstream 100 bases:

>100_bases
CCCCCGCCGAGTATTACCAGCGCGACCGGCGCATCCACCCGCCGGCTTTGACGCCGGATTACAAGACCTCGGTCGCGCGC
AGCCCGCGCTTCAGCCTGAT

Product: 4-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSDCPVPDHGVPDHPVPDRHATGMKTRREVLGDTHVDRAEEQTSDLDRPFQDLITISAWGTVWASDGISRRERSMLTLAL
LAATGNWEEIPMHIRATARTGASRRDVVEAFQHVAIYCGVPRANHALKLAKQTFAEMEEEESR

Sequences:

>Translated_143_residues
MSDCPVPDHGVPDHPVPDRHATGMKTRREVLGDTHVDRAEEQTSDLDRPFQDLITISAWGTVWASDGISRRERSMLTLAL
LAATGNWEEIPMHIRATARTGASRRDVVEAFQHVAIYCGVPRANHALKLAKQTFAEMEEEESR
>Mature_142_residues
SDCPVPDHGVPDHPVPDRHATGMKTRREVLGDTHVDRAEEQTSDLDRPFQDLITISAWGTVWASDGISRRERSMLTLALL
AATGNWEEIPMHIRATARTGASRRDVVEAFQHVAIYCGVPRANHALKLAKQTFAEMEEEESR

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 15999; Mature: 15868

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDCPVPDHGVPDHPVPDRHATGMKTRREVLGDTHVDRAEEQTSDLDRPFQDLITISAWG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCC
TVWASDGISRRERSMLTLALLAATGNWEEIPMHIRATARTGASRRDVVEAFQHVAIYCGV
HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC
PRANHALKLAKQTFAEMEEEESR
CCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDCPVPDHGVPDHPVPDRHATGMKTRREVLGDTHVDRAEEQTSDLDRPFQDLITISAWG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHCC
TVWASDGISRRERSMLTLALLAATGNWEEIPMHIRATARTGASRRDVVEAFQHVAIYCGV
HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC
PRANHALKLAKQTFAEMEEEESR
CCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]