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The map label for this gene is pcaH [H]

Identifier: 119386204

GI number: 119386204

Start: 639431

End: 640153

Strand: Direct

Name: pcaH [H]

Synonym: Pden_3493

Alternate gene names: 119386204

Gene position: 639431-640153 (Clockwise)

Preceding gene: 119386203

Following gene: 119386205

Centisome position: 36.96

GC content: 64.87

Gene sequence:

>723_bases
ATGACCCCCGCCGAGTATTACCAGCGCGACCGGCGCATCCACCCGCCGGCTTTGACGCCGGATTACAAGACCTCGGTCGC
GCGCAGCCCGCGCTTCAGCCTGATCAGCCTGCAAGGCTCGATGTCGGAGATCACCGGCCCGACCTTCGGCCATGGCGACA
TCAGCCCGATCGACAACGACCTGATCAAGAACTACGCCAAGGACGGCGACCCCATCGGGGAACGCATCATCGTCCATGGC
CGCGTGCTGGACGAAAATGCCCGGCCCGTGCCCGACACGCTGGTCGAGGTGTGGCAGGCCAATGCCGGCGGCCGCTATCG
CCACAAGAAGGACAGCTATCTGGCCCCCATCGACCCCAATTTCGGCGGCTGCGGGCGCACCATCACCGATGCGGACGGCT
ATTACTTCTTTCGCACCATCAAGCCCGGCGCCTATCCTTGGCGCAACTGGGTCAACAACTGGCGCCCGGCGCATATCCAT
GTCTCGGTCTTCGGCCATGCCTTCTGCCAGCGGCTGATCACCCAGCTTTACTTCGAGGGCGACCCGCTGATCCCGATCTG
CCCCATCGTGCAGACCATCCCGGACCCCGAGGCCGTCGACCGCCTGACCGCGAAGCTGGACATGAACGCCACGGTGCCGC
TGGACAGCATCGCCTATCGTTTCGACATCGTGCTGCGCGGGCGCCGCTCGACCATGTTCGAGAACCGGCTGGAGGGGAAC
TGA

Upstream 100 bases:

>100_bases
CGTTCCAGCATGTCGCCATCTATTGCGGCGTGCCCAGGGCGAACCACGCGCTGAAACTGGCCAAGCAGACCTTTGCCGAG
ATGGAAGAGGAGGAGAGCCG

Downstream 100 bases:

>100_bases
TGAAGGTTGTCGATGCACGGGCCAACCGCCCGCAATACCTGCAGGAAACCGCGTCGCAGACCGCCGGCCCCTATGTCCAT
ATCGGGCTGGCGCCGGGGGC

Product: protocatechuate 3,4-dioxygenase, beta subunit

Products: NA

Alternate protein names: 3,4-PCD [H]

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTPAEYYQRDRRIHPPALTPDYKTSVARSPRFSLISLQGSMSEITGPTFGHGDISPIDNDLIKNYAKDGDPIGERIIVHG
RVLDENARPVPDTLVEVWQANAGGRYRHKKDSYLAPIDPNFGGCGRTITDADGYYFFRTIKPGAYPWRNWVNNWRPAHIH
VSVFGHAFCQRLITQLYFEGDPLIPICPIVQTIPDPEAVDRLTAKLDMNATVPLDSIAYRFDIVLRGRRSTMFENRLEGN

Sequences:

>Translated_240_residues
MTPAEYYQRDRRIHPPALTPDYKTSVARSPRFSLISLQGSMSEITGPTFGHGDISPIDNDLIKNYAKDGDPIGERIIVHG
RVLDENARPVPDTLVEVWQANAGGRYRHKKDSYLAPIDPNFGGCGRTITDADGYYFFRTIKPGAYPWRNWVNNWRPAHIH
VSVFGHAFCQRLITQLYFEGDPLIPICPIVQTIPDPEAVDRLTAKLDMNATVPLDSIAYRFDIVLRGRRSTMFENRLEGN
>Mature_239_residues
TPAEYYQRDRRIHPPALTPDYKTSVARSPRFSLISLQGSMSEITGPTFGHGDISPIDNDLIKNYAKDGDPIGERIIVHGR
VLDENARPVPDTLVEVWQANAGGRYRHKKDSYLAPIDPNFGGCGRTITDADGYYFFRTIKPGAYPWRNWVNNWRPAHIHV
SVFGHAFCQRLITQLYFEGDPLIPICPIVQTIPDPEAVDRLTAKLDMNATVPLDSIAYRFDIVLRGRRSTMFENRLEGN

Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889
- InterPro:   IPR012785 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: =1.13.11.3 [H]

Molecular weight: Translated: 27200; Mature: 27069

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAEYYQRDRRIHPPALTPDYKTSVARSPRFSLISLQGSMSEITGPTFGHGDISPIDND
CCCHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCHHH
LIKNYAKDGDPIGERIIVHGRVLDENARPVPDTLVEVWQANAGGRYRHKKDSYLAPIDPN
HHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCC
FGGCGRTITDADGYYFFRTIKPGAYPWRNWVNNWRPAHIHVSVFGHAFCQRLITQLYFEG
CCCCCCEEECCCCEEEEEEECCCCCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCC
DPLIPICPIVQTIPDPEAVDRLTAKLDMNATVPLDSIAYRFDIVLRGRRSTMFENRLEGN
CCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHEEEEEEEECCHHHHHHHHCCCC
>Mature Secondary Structure 
TPAEYYQRDRRIHPPALTPDYKTSVARSPRFSLISLQGSMSEITGPTFGHGDISPIDND
CCHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCHHH
LIKNYAKDGDPIGERIIVHGRVLDENARPVPDTLVEVWQANAGGRYRHKKDSYLAPIDPN
HHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCC
FGGCGRTITDADGYYFFRTIKPGAYPWRNWVNNWRPAHIHVSVFGHAFCQRLITQLYFEG
CCCCCCEEECCCCEEEEEEECCCCCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCC
DPLIPICPIVQTIPDPEAVDRLTAKLDMNATVPLDSIAYRFDIVLRGRRSTMFENRLEGN
CCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHEEEEEEEECCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8407791; 115853; 3194022; 7990141; 9254599; 9254600; 9298971 [H]