Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is catD [H]

Identifier: 119386202

GI number: 119386202

Start: 638222

End: 639010

Strand: Direct

Name: catD [H]

Synonym: Pden_3491

Alternate gene names: 119386202

Gene position: 638222-639010 (Clockwise)

Preceding gene: 119386201

Following gene: 119386203

Centisome position: 36.89

GC content: 71.61

Gene sequence:

>789_bases
ATGCGGACGATCATGGCAAACGGCGCGGATCTGCATGTCGCGGTGTCGGGACCGGAAACCGGGCCGGCGGTGGTCTTTGC
GAATTCGCTGGGCACCGACCTGCGGGTCTGGGACGGGCTGATCCCGCATCTGGCGCCGGGCCTGCGGCTGGTGCGCTATG
ACAAGCGCGGCCACGGGCTGTCCCAGGAAACGTCCGGCCCCTACGGCATCGAGATGCTGGCCGACGACGCCGCGGCGCTG
ATCTCGGCGCTGGGGCTGGGGCGGGTGGTCTTCGTGGGCCTGTCCATCGGCGGGCTGATCGGCCTGTCGCTGGCCGCCCG
CCATCCGGGCCTGCTGGCGGGGCTGGTGGTGTCGAACTCGGCCGCCAGGATCGGCGATGCGGCGATGTGGAACGCCCGGA
TCCAGGCGATCCGCGACGAGGGGCTGGCCAGTATCGCGGCGCCGACGATGGAGCGCTGGTTCTCGCCCGCCTTCCGGGCC
AAGGGGCTTGACGCGCCTTGGCGCCGGATGCTCGCCCGACAGCCGCAGGGGGGCTATGTCGCCTGCTGCCAGGCCATTGC
CGGGGCCGACCTGACCGATGCGGCCCGTGCGCTGGACCTGCCGGTGCAGGTGATCGCGGGCGGGCTGGACGGCTCGACCC
CGCCGGATCTGGTGCAGGCCACCGCCGCGCTGATCCCCGGCGCGCGCTTCGACCTGATCGCGGATGCCGCGCATATTCCC
TGCGTGGAGGCGCCCGCCGCCCATGCGGCCATCCTCAACCGTTTTTTCAAGGACATCGGCCATGTCTGA

Upstream 100 bases:

>100_bases
CGTTCGACCTGAAGATGCAAAAGGCCGATATCGCCTTCCTGCGCGACAACGAATCGCAGCAGCGCGCATTCGCCGAAAAC
TATGTGGGGTTGCCTTACTG

Downstream 100 bases:

>100_bases
TTGCCCCGTCCCCGACCATGGCGTCCCCGACCATCCCGTCCCCGACCGCCATGCGACCGGCATGAAAACCCGCCGCGAGG
TGCTGGGTGATACGCATGTG

Product: 3-oxoadipate enol-lactonase

Products: NA

Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MRTIMANGADLHVAVSGPETGPAVVFANSLGTDLRVWDGLIPHLAPGLRLVRYDKRGHGLSQETSGPYGIEMLADDAAAL
ISALGLGRVVFVGLSIGGLIGLSLAARHPGLLAGLVVSNSAARIGDAAMWNARIQAIRDEGLASIAAPTMERWFSPAFRA
KGLDAPWRRMLARQPQGGYVACCQAIAGADLTDAARALDLPVQVIAGGLDGSTPPDLVQATAALIPGARFDLIADAAHIP
CVEAPAAHAAILNRFFKDIGHV

Sequences:

>Translated_262_residues
MRTIMANGADLHVAVSGPETGPAVVFANSLGTDLRVWDGLIPHLAPGLRLVRYDKRGHGLSQETSGPYGIEMLADDAAAL
ISALGLGRVVFVGLSIGGLIGLSLAARHPGLLAGLVVSNSAARIGDAAMWNARIQAIRDEGLASIAAPTMERWFSPAFRA
KGLDAPWRRMLARQPQGGYVACCQAIAGADLTDAARALDLPVQVIAGGLDGSTPPDLVQATAALIPGARFDLIADAAHIP
CVEAPAAHAAILNRFFKDIGHV
>Mature_262_residues
MRTIMANGADLHVAVSGPETGPAVVFANSLGTDLRVWDGLIPHLAPGLRLVRYDKRGHGLSQETSGPYGIEMLADDAAAL
ISALGLGRVVFVGLSIGGLIGLSLAARHPGLLAGLVVSNSAARIGDAAMWNARIQAIRDEGLASIAAPTMERWFSPAFRA
KGLDAPWRRMLARQPQGGYVACCQAIAGADLTDAARALDLPVQVIAGGLDGSTPPDLVQATAALIPGARFDLIADAAHIP
CVEAPAAHAAILNRFFKDIGHV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR012790 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.24 [H]

Molecular weight: Translated: 27141; Mature: 27141

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTIMANGADLHVAVSGPETGPAVVFANSLGTDLRVWDGLIPHLAPGLRLVRYDKRGHGL
CCEEECCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCC
SQETSGPYGIEMLADDAAALISALGLGRVVFVGLSIGGLIGLSLAARHPGLLAGLVVSNS
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCC
AARIGDAAMWNARIQAIRDEGLASIAAPTMERWFSPAFRAKGLDAPWRRMLARQPQGGYV
CHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCCCHH
ACCQAIAGADLTDAARALDLPVQVIAGGLDGSTPPDLVQATAALIPGARFDLIADAAHIP
HHHHHHHCCCHHHHHHHHCCCHHHEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC
CVEAPAAHAAILNRFFKDIGHV
CCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRTIMANGADLHVAVSGPETGPAVVFANSLGTDLRVWDGLIPHLAPGLRLVRYDKRGHGL
CCEEECCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCC
SQETSGPYGIEMLADDAAALISALGLGRVVFVGLSIGGLIGLSLAARHPGLLAGLVVSNS
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCC
AARIGDAAMWNARIQAIRDEGLASIAAPTMERWFSPAFRAKGLDAPWRRMLARQPQGGYV
CHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCCCHH
ACCQAIAGADLTDAARALDLPVQVIAGGLDGSTPPDLVQATAALIPGARFDLIADAAHIP
HHHHHHHCCCHHHHHHHHCCCHHHEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC
CVEAPAAHAAILNRFFKDIGHV
CCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8125318; 670169 [H]