Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is pobA [H]

Identifier: 119386201

GI number: 119386201

Start: 637053

End: 638222

Strand: Direct

Name: pobA [H]

Synonym: Pden_3490

Alternate gene names: 119386201

Gene position: 637053-638222 (Clockwise)

Preceding gene: 119386199

Following gene: 119386202

Centisome position: 36.82

GC content: 65.64

Gene sequence:

>1170_bases
ATGCGCACTCAGGTCGTTATCATCGGTGGCGGGCCGTCGGGGCTGCTTCTGGGCCAGCTTCTGCACCGCAAGGGCATCGA
GGCGGTGGTGCTGGAGCGCAAGACGCGGGACTATGTGCTGGGCCGCATCCGGGCCGGCGTGCTGGAGACCGGCCTTGTCC
GGCTGATGGAGGAAGCGGGCGTCTCCGACCGGCTGCACCGCGAGGGCTTCGTTCATGACGGCACCCAGATCGCCTGGGAC
GGCGGCATGTTCCACATCGACTTCAAGCAGCTGACCGGCACGCCGGTGGTGGTCTATGGCCAGACCGAGGTGACGCGCGA
TCTTTACGACGCGCGCGAGGCCGCAGGCGCGCAGACCATCTTCGAGGTCGAGGACGTGGTGATCCACGATGCCGACAGCG
ACCGCCCGCATGTGACCTATACCCGCGCCGGGCAAGGCCGCCGCATCGATTGCGATTTCGTCGCCGGCTGCGACGGGTTC
CACGGCATCAGCCGGCAGACCATCCCGCTGGACGTCCGGCGCGAATACGAAAAGACCTATCCCTTCGGCTGGCTGGGCAT
CCTGTCGGAAACGCCCCCGGTCCACGAGGAACTGATCTACACCAGTTCCGACCGCGGCTTTGCCCTGTGCTCCATGCGCA
ACGCCAACCTGTCGCGCTATTACATCCAATGCGCGCTGTCGGACCATACCAGCGACTGGACCGACGCCGCCTTCTGGGAC
GAGCTTCGCCGCCGCCTGCCCGAAGACGTGGCCGACCGGCTGGTCACGGGGCCCTCGATCGAGAAATCCATCGCGCCGCT
GCGCTCGTTCGTGACCGAGCCGATGCGCTGGGGCCGGCTGTTCCTGTGCGGCGACGCCGCCCATATCGTGCCGCCGACCG
GCGCCAAGGGGCTGAACACGGCGGCCAGCGACGTGCAATACCTGTATAACGGGCTGGTGCAATATTACCGGGACAAGGAC
AGCGAGGGCATCGACCGCTATTCCGAAAAGGCGCTGCTGCGCGTGTGGAAGGCCGAACGCTTCAGCTGGTGGTTCAGCGG
CCTGCTGCACCGCTATCCCCACCAGAGCCCGTTCGACCTGAAGATGCAAAAGGCCGATATCGCCTTCCTGCGCGACAACG
AATCGCAGCAGCGCGCATTCGCCGAAAACTATGTGGGGTTGCCTTACTGA

Upstream 100 bases:

>100_bases
GCGCTCCAATACTTGCCGTTTCTGATAATCGTCAAACCCGATTACTCATTTTACTTGCGGTGCGTGACAGGTCAAGTTCG
GCGACAGAGGGAGGACTGTC

Downstream 100 bases:

>100_bases
TGCGGACGATCATGGCAAACGGCGCGGATCTGCATGTCGCGGTGTCGGGACCGGAAACCGGGCCGGCGGTGGTCTTTGCG
AATTCGCTGGGCACCGACCT

Product: 4-hydroxybenzoate 3-monooxygenase

Products: NA

Alternate protein names: PHBH; 4-hydroxybenzoate 3-monooxygenase [H]

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MRTQVVIIGGGPSGLLLGQLLHRKGIEAVVLERKTRDYVLGRIRAGVLETGLVRLMEEAGVSDRLHREGFVHDGTQIAWD
GGMFHIDFKQLTGTPVVVYGQTEVTRDLYDAREAAGAQTIFEVEDVVIHDADSDRPHVTYTRAGQGRRIDCDFVAGCDGF
HGISRQTIPLDVRREYEKTYPFGWLGILSETPPVHEELIYTSSDRGFALCSMRNANLSRYYIQCALSDHTSDWTDAAFWD
ELRRRLPEDVADRLVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNTAASDVQYLYNGLVQYYRDKD
SEGIDRYSEKALLRVWKAERFSWWFSGLLHRYPHQSPFDLKMQKADIAFLRDNESQQRAFAENYVGLPY

Sequences:

>Translated_389_residues
MRTQVVIIGGGPSGLLLGQLLHRKGIEAVVLERKTRDYVLGRIRAGVLETGLVRLMEEAGVSDRLHREGFVHDGTQIAWD
GGMFHIDFKQLTGTPVVVYGQTEVTRDLYDAREAAGAQTIFEVEDVVIHDADSDRPHVTYTRAGQGRRIDCDFVAGCDGF
HGISRQTIPLDVRREYEKTYPFGWLGILSETPPVHEELIYTSSDRGFALCSMRNANLSRYYIQCALSDHTSDWTDAAFWD
ELRRRLPEDVADRLVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNTAASDVQYLYNGLVQYYRDKD
SEGIDRYSEKALLRVWKAERFSWWFSGLLHRYPHQSPFDLKMQKADIAFLRDNESQQRAFAENYVGLPY
>Mature_389_residues
MRTQVVIIGGGPSGLLLGQLLHRKGIEAVVLERKTRDYVLGRIRAGVLETGLVRLMEEAGVSDRLHREGFVHDGTQIAWD
GGMFHIDFKQLTGTPVVVYGQTEVTRDLYDAREAAGAQTIFEVEDVVIHDADSDRPHVTYTRAGQGRRIDCDFVAGCDGF
HGISRQTIPLDVRREYEKTYPFGWLGILSETPPVHEELIYTSSDRGFALCSMRNANLSRYYIQCALSDHTSDWTDAAFWD
ELRRRLPEDVADRLVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNTAASDVQYLYNGLVQYYRDKD
SEGIDRYSEKALLRVWKAERFSWWFSGLLHRYPHQSPFDLKMQKADIAFLRDNESQQRAFAENYVGLPY

Specific function: Unknown

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012733
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.14.13.2 [H]

Molecular weight: Translated: 44126; Mature: 44126

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTQVVIIGGGPSGLLLGQLLHRKGIEAVVLERKTRDYVLGRIRAGVLETGLVRLMEEAG
CCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC
VSDRLHREGFVHDGTQIAWDGGMFHIDFKQLTGTPVVVYGQTEVTRDLYDAREAAGAQTI
CHHHHHHCCCCCCCCEEEECCCEEEEEHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEE
FEVEDVVIHDADSDRPHVTYTRAGQGRRIDCDFVAGCDGFHGISRQTIPLDVRREYEKTY
EEEEEEEEECCCCCCCEEEEEECCCCCEECEEEEECCCCCCCCCCCCCCHHHHHHHHHCC
PFGWLGILSETPPVHEELIYTSSDRGFALCSMRNANLSRYYIQCALSDHTSDWTDAAFWD
CCEEEECCCCCCCCCHHHEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHH
ELRRRLPEDVADRLVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNT
HHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHCEEEEECCCCEEECCCCCCCCCH
AASDVQYLYNGLVQYYRDKDSEGIDRYSEKALLRVWKAERFSWWFSGLLHRYPHQSPFDL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
KMQKADIAFLRDNESQQRAFAENYVGLPY
EEECCEEEEEECCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRTQVVIIGGGPSGLLLGQLLHRKGIEAVVLERKTRDYVLGRIRAGVLETGLVRLMEEAG
CCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC
VSDRLHREGFVHDGTQIAWDGGMFHIDFKQLTGTPVVVYGQTEVTRDLYDAREAAGAQTI
CHHHHHHCCCCCCCCEEEECCCEEEEEHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEE
FEVEDVVIHDADSDRPHVTYTRAGQGRRIDCDFVAGCDGFHGISRQTIPLDVRREYEKTY
EEEEEEEEECCCCCCCEEEEEECCCCCEECEEEEECCCCCCCCCCCCCCHHHHHHHHHCC
PFGWLGILSETPPVHEELIYTSSDRGFALCSMRNANLSRYYIQCALSDHTSDWTDAAFWD
CCEEEECCCCCCCCCHHHEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHH
ELRRRLPEDVADRLVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNT
HHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHCEEEEECCCCEEECCCCCCCCCH
AASDVQYLYNGLVQYYRDKDSEGIDRYSEKALLRVWKAERFSWWFSGLLHRYPHQSPFDL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
KMQKADIAFLRDNESQQRAFAENYVGLPY
EEECCEEEEEECCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2465205; 10984043; 7939628; 8555229; 8312276 [H]