Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
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Accession | NC_008687 |
Length | 1,730,097 |
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The map label for this gene is pobA [H]
Identifier: 119386201
GI number: 119386201
Start: 637053
End: 638222
Strand: Direct
Name: pobA [H]
Synonym: Pden_3490
Alternate gene names: 119386201
Gene position: 637053-638222 (Clockwise)
Preceding gene: 119386199
Following gene: 119386202
Centisome position: 36.82
GC content: 65.64
Gene sequence:
>1170_bases ATGCGCACTCAGGTCGTTATCATCGGTGGCGGGCCGTCGGGGCTGCTTCTGGGCCAGCTTCTGCACCGCAAGGGCATCGA GGCGGTGGTGCTGGAGCGCAAGACGCGGGACTATGTGCTGGGCCGCATCCGGGCCGGCGTGCTGGAGACCGGCCTTGTCC GGCTGATGGAGGAAGCGGGCGTCTCCGACCGGCTGCACCGCGAGGGCTTCGTTCATGACGGCACCCAGATCGCCTGGGAC GGCGGCATGTTCCACATCGACTTCAAGCAGCTGACCGGCACGCCGGTGGTGGTCTATGGCCAGACCGAGGTGACGCGCGA TCTTTACGACGCGCGCGAGGCCGCAGGCGCGCAGACCATCTTCGAGGTCGAGGACGTGGTGATCCACGATGCCGACAGCG ACCGCCCGCATGTGACCTATACCCGCGCCGGGCAAGGCCGCCGCATCGATTGCGATTTCGTCGCCGGCTGCGACGGGTTC CACGGCATCAGCCGGCAGACCATCCCGCTGGACGTCCGGCGCGAATACGAAAAGACCTATCCCTTCGGCTGGCTGGGCAT CCTGTCGGAAACGCCCCCGGTCCACGAGGAACTGATCTACACCAGTTCCGACCGCGGCTTTGCCCTGTGCTCCATGCGCA ACGCCAACCTGTCGCGCTATTACATCCAATGCGCGCTGTCGGACCATACCAGCGACTGGACCGACGCCGCCTTCTGGGAC GAGCTTCGCCGCCGCCTGCCCGAAGACGTGGCCGACCGGCTGGTCACGGGGCCCTCGATCGAGAAATCCATCGCGCCGCT GCGCTCGTTCGTGACCGAGCCGATGCGCTGGGGCCGGCTGTTCCTGTGCGGCGACGCCGCCCATATCGTGCCGCCGACCG GCGCCAAGGGGCTGAACACGGCGGCCAGCGACGTGCAATACCTGTATAACGGGCTGGTGCAATATTACCGGGACAAGGAC AGCGAGGGCATCGACCGCTATTCCGAAAAGGCGCTGCTGCGCGTGTGGAAGGCCGAACGCTTCAGCTGGTGGTTCAGCGG CCTGCTGCACCGCTATCCCCACCAGAGCCCGTTCGACCTGAAGATGCAAAAGGCCGATATCGCCTTCCTGCGCGACAACG AATCGCAGCAGCGCGCATTCGCCGAAAACTATGTGGGGTTGCCTTACTGA
Upstream 100 bases:
>100_bases GCGCTCCAATACTTGCCGTTTCTGATAATCGTCAAACCCGATTACTCATTTTACTTGCGGTGCGTGACAGGTCAAGTTCG GCGACAGAGGGAGGACTGTC
Downstream 100 bases:
>100_bases TGCGGACGATCATGGCAAACGGCGCGGATCTGCATGTCGCGGTGTCGGGACCGGAAACCGGGCCGGCGGTGGTCTTTGCG AATTCGCTGGGCACCGACCT
Product: 4-hydroxybenzoate 3-monooxygenase
Products: NA
Alternate protein names: PHBH; 4-hydroxybenzoate 3-monooxygenase [H]
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MRTQVVIIGGGPSGLLLGQLLHRKGIEAVVLERKTRDYVLGRIRAGVLETGLVRLMEEAGVSDRLHREGFVHDGTQIAWD GGMFHIDFKQLTGTPVVVYGQTEVTRDLYDAREAAGAQTIFEVEDVVIHDADSDRPHVTYTRAGQGRRIDCDFVAGCDGF HGISRQTIPLDVRREYEKTYPFGWLGILSETPPVHEELIYTSSDRGFALCSMRNANLSRYYIQCALSDHTSDWTDAAFWD ELRRRLPEDVADRLVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNTAASDVQYLYNGLVQYYRDKD SEGIDRYSEKALLRVWKAERFSWWFSGLLHRYPHQSPFDLKMQKADIAFLRDNESQQRAFAENYVGLPY
Sequences:
>Translated_389_residues MRTQVVIIGGGPSGLLLGQLLHRKGIEAVVLERKTRDYVLGRIRAGVLETGLVRLMEEAGVSDRLHREGFVHDGTQIAWD GGMFHIDFKQLTGTPVVVYGQTEVTRDLYDAREAAGAQTIFEVEDVVIHDADSDRPHVTYTRAGQGRRIDCDFVAGCDGF HGISRQTIPLDVRREYEKTYPFGWLGILSETPPVHEELIYTSSDRGFALCSMRNANLSRYYIQCALSDHTSDWTDAAFWD ELRRRLPEDVADRLVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNTAASDVQYLYNGLVQYYRDKD SEGIDRYSEKALLRVWKAERFSWWFSGLLHRYPHQSPFDLKMQKADIAFLRDNESQQRAFAENYVGLPY >Mature_389_residues MRTQVVIIGGGPSGLLLGQLLHRKGIEAVVLERKTRDYVLGRIRAGVLETGLVRLMEEAGVSDRLHREGFVHDGTQIAWD GGMFHIDFKQLTGTPVVVYGQTEVTRDLYDAREAAGAQTIFEVEDVVIHDADSDRPHVTYTRAGQGRRIDCDFVAGCDGF HGISRQTIPLDVRREYEKTYPFGWLGILSETPPVHEELIYTSSDRGFALCSMRNANLSRYYIQCALSDHTSDWTDAAFWD ELRRRLPEDVADRLVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNTAASDVQYLYNGLVQYYRDKD SEGIDRYSEKALLRVWKAERFSWWFSGLLHRYPHQSPFDLKMQKADIAFLRDNESQQRAFAENYVGLPY
Specific function: Unknown
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012733 - InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.2 [H]
Molecular weight: Translated: 44126; Mature: 44126
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTQVVIIGGGPSGLLLGQLLHRKGIEAVVLERKTRDYVLGRIRAGVLETGLVRLMEEAG CCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC VSDRLHREGFVHDGTQIAWDGGMFHIDFKQLTGTPVVVYGQTEVTRDLYDAREAAGAQTI CHHHHHHCCCCCCCCEEEECCCEEEEEHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEE FEVEDVVIHDADSDRPHVTYTRAGQGRRIDCDFVAGCDGFHGISRQTIPLDVRREYEKTY EEEEEEEEECCCCCCCEEEEEECCCCCEECEEEEECCCCCCCCCCCCCCHHHHHHHHHCC PFGWLGILSETPPVHEELIYTSSDRGFALCSMRNANLSRYYIQCALSDHTSDWTDAAFWD CCEEEECCCCCCCCCHHHEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHH ELRRRLPEDVADRLVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNT HHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHCEEEEECCCCEEECCCCCCCCCH AASDVQYLYNGLVQYYRDKDSEGIDRYSEKALLRVWKAERFSWWFSGLLHRYPHQSPFDL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE KMQKADIAFLRDNESQQRAFAENYVGLPY EEECCEEEEEECCCHHHHHHHHCCCCCCC >Mature Secondary Structure MRTQVVIIGGGPSGLLLGQLLHRKGIEAVVLERKTRDYVLGRIRAGVLETGLVRLMEEAG CCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCC VSDRLHREGFVHDGTQIAWDGGMFHIDFKQLTGTPVVVYGQTEVTRDLYDAREAAGAQTI CHHHHHHCCCCCCCCEEEECCCEEEEEHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEE FEVEDVVIHDADSDRPHVTYTRAGQGRRIDCDFVAGCDGFHGISRQTIPLDVRREYEKTY EEEEEEEEECCCCCCCEEEEEECCCCCEECEEEEECCCCCCCCCCCCCCHHHHHHHHHCC PFGWLGILSETPPVHEELIYTSSDRGFALCSMRNANLSRYYIQCALSDHTSDWTDAAFWD CCEEEECCCCCCCCCHHHEEECCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHH ELRRRLPEDVADRLVTGPSIEKSIAPLRSFVTEPMRWGRLFLCGDAAHIVPPTGAKGLNT HHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHCEEEEECCCCEEECCCCCCCCCH AASDVQYLYNGLVQYYRDKDSEGIDRYSEKALLRVWKAERFSWWFSGLLHRYPHQSPFDL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE KMQKADIAFLRDNESQQRAFAENYVGLPY EEECCEEEEEECCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2465205; 10984043; 7939628; 8555229; 8312276 [H]