Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386181

Identifier: 119386181

GI number: 119386181

Start: 613765

End: 614847

Strand: Direct

Name: 119386181

Synonym: Pden_3469

Alternate gene names: NA

Gene position: 613765-614847 (Clockwise)

Preceding gene: 119386178

Following gene: 119386185

Centisome position: 35.48

GC content: 70.08

Gene sequence:

>1083_bases
ATGTCGATCAGACATTCCGCACCATCTTTTGCCAAGGAGCCGCTGCCCGCGATCCGCGGCGTGCTGCACCAGTTGACCAT
GGCTGCGCTGCATGTGCAGCTTCGCGCCCGGTTCCAGGCGGATCGGCCGCAGGTCCTGGCCCGCCGGGCCGGGATCATGG
CCCATGCGGCTGTCGACGGGCAGGCCAGCCTGCGTGCGATGTCGCATTACTGCCTTGAACAACTCATGCCCCGCGTGCGG
TCGTTGATGATGCAGGTCGATGCCGCGGCCAGGCTTGCCGCCTTGCCGGCAGAGGTCGCGCCGGGCGCAGGACTCGCGGC
ACAGTTGAGCGACATTGCCGCCAATCTGGAGCGTGCGCGCGAGACGTCGCGCGGCCGGGCCCGCACTCCGCATAAAAGCG
CCGGCATGATCCGGCTGAGCGAGCAGCGGCTTTGGGCTGCGCTGGCAACCGAACTGCAACGGCTGGAAGAGACCGACGGC
CCGATGAGCCACGCCAGCGCCCGGATCGAAGCGGCTGCCTTCGAGCTTGCCGCGGCGATCGAAGCGTTCCTGGAGCGTGA
CGAGGGCATGGCGCTGGCGCAACGCCACGATCTGGCCCAGATCCTGATCCGGCTGGAAAGCCAGGCGGCCACGACCCCGC
TGTCCCCCGGCGAGATCGCCGGGCAGCTTGGTCCCGCCGCCGCCCGCCTGCCCGATCTGGTGGACCTGTGCGTCGATCTG
TCCCGGGCATACCAGCCGCTGCGCGAGGCCCGGCCGCAAATCGCCATGGTCCTGTCCATCGCGACCCAGACCGCCACCCA
GTCCGGCGCGACCCGGCGGCTTGAGCAGGCCATGCAGGATCTGGACCATCTGCTGGGCGGGCTGGTTTCCGACTATCGCG
CCCTGGCGCGATCCGCCAAGCGCCCGCAAGGCAAGGCGGCCATGCGGCGGTTGATCGCCGCCGAGGCGTCGTTGTGGCAT
GAGGCGGCAAGGCTGCTGGCCGTTCCGCTGGCACTGGTCCCGGACGCCCCGGCAGCCCGTCCCGCGATACAGGCCGAAGC
CCCTGCCGGCGACGAGCATCCGGCGATAGTGGCCTGCGCCTGA

Upstream 100 bases:

>100_bases
ACTTGTATCATAAAGGCCGTCCTCTGTGCGCCCGCGCACAGAACTGCCGTGCCGGTTGCGGCATGTTTTGGAAAAATTTT
GCAATCAGAGGGCGTGTTTC

Downstream 100 bases:

>100_bases
CAGGCCCATCGTCTCTGCCGCCGAGAATTTCAGAGCATTTGATCATTACCTTGTTTTAAGTCTCTCTCTGAAAGAAAGGG
TCAGGATCGTGACGATCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MSIRHSAPSFAKEPLPAIRGVLHQLTMAALHVQLRARFQADRPQVLARRAGIMAHAAVDGQASLRAMSHYCLEQLMPRVR
SLMMQVDAAARLAALPAEVAPGAGLAAQLSDIAANLERARETSRGRARTPHKSAGMIRLSEQRLWAALATELQRLEETDG
PMSHASARIEAAAFELAAAIEAFLERDEGMALAQRHDLAQILIRLESQAATTPLSPGEIAGQLGPAAARLPDLVDLCVDL
SRAYQPLREARPQIAMVLSIATQTATQSGATRRLEQAMQDLDHLLGGLVSDYRALARSAKRPQGKAAMRRLIAAEASLWH
EAARLLAVPLALVPDAPAARPAIQAEAPAGDEHPAIVACA

Sequences:

>Translated_360_residues
MSIRHSAPSFAKEPLPAIRGVLHQLTMAALHVQLRARFQADRPQVLARRAGIMAHAAVDGQASLRAMSHYCLEQLMPRVR
SLMMQVDAAARLAALPAEVAPGAGLAAQLSDIAANLERARETSRGRARTPHKSAGMIRLSEQRLWAALATELQRLEETDG
PMSHASARIEAAAFELAAAIEAFLERDEGMALAQRHDLAQILIRLESQAATTPLSPGEIAGQLGPAAARLPDLVDLCVDL
SRAYQPLREARPQIAMVLSIATQTATQSGATRRLEQAMQDLDHLLGGLVSDYRALARSAKRPQGKAAMRRLIAAEASLWH
EAARLLAVPLALVPDAPAARPAIQAEAPAGDEHPAIVACA
>Mature_359_residues
SIRHSAPSFAKEPLPAIRGVLHQLTMAALHVQLRARFQADRPQVLARRAGIMAHAAVDGQASLRAMSHYCLEQLMPRVRS
LMMQVDAAARLAALPAEVAPGAGLAAQLSDIAANLERARETSRGRARTPHKSAGMIRLSEQRLWAALATELQRLEETDGP
MSHASARIEAAAFELAAAIEAFLERDEGMALAQRHDLAQILIRLESQAATTPLSPGEIAGQLGPAAARLPDLVDLCVDLS
RAYQPLREARPQIAMVLSIATQTATQSGATRRLEQAMQDLDHLLGGLVSDYRALARSAKRPQGKAAMRRLIAAEASLWHE
AARLLAVPLALVPDAPAARPAIQAEAPAGDEHPAIVACA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38494; Mature: 38363

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRHSAPSFAKEPLPAIRGVLHQLTMAALHVQLRARFQADRPQVLARRAGIMAHAAVDG
CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
QASLRAMSHYCLEQLMPRVRSLMMQVDAAARLAALPAEVAPGAGLAAQLSDIAANLERAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHH
ETSRGRARTPHKSAGMIRLSEQRLWAALATELQRLEETDGPMSHASARIEAAAFELAAAI
HHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EAFLERDEGMALAQRHDLAQILIRLESQAATTPLSPGEIAGQLGPAAARLPDLVDLCVDL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
SRAYQPLREARPQIAMVLSIATQTATQSGATRRLEQAMQDLDHLLGGLVSDYRALARSAK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RPQGKAAMRRLIAAEASLWHEAARLLAVPLALVPDAPAARPAIQAEAPAGDEHPAIVACA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure 
SIRHSAPSFAKEPLPAIRGVLHQLTMAALHVQLRARFQADRPQVLARRAGIMAHAAVDG
CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
QASLRAMSHYCLEQLMPRVRSLMMQVDAAARLAALPAEVAPGAGLAAQLSDIAANLERAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHH
ETSRGRARTPHKSAGMIRLSEQRLWAALATELQRLEETDGPMSHASARIEAAAFELAAAI
HHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EAFLERDEGMALAQRHDLAQILIRLESQAATTPLSPGEIAGQLGPAAARLPDLVDLCVDL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
SRAYQPLREARPQIAMVLSIATQTATQSGATRRLEQAMQDLDHLLGGLVSDYRALARSAK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RPQGKAAMRRLIAAEASLWHEAARLLAVPLALVPDAPAARPAIQAEAPAGDEHPAIVACA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA