Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357473
Identifier: 119357473
GI number: 119357473
Start: 1900548
End: 1900943
Strand: Direct
Name: 119357473
Synonym: Cpha266_1672
Alternate gene names: NA
Gene position: 1900548-1900943 (Clockwise)
Preceding gene: 119357472
Following gene: 119357475
Centisome position: 60.64
GC content: 48.48
Gene sequence:
>396_bases ATGATGAAATTCAATAGTGCCGAAGATGTTCTGTTTCAATGGGTCACCCGTGTATGCAATGGAAATCCGGACACCATTGC ATCCCTTTATCACGATCATGCCGTACTTATCCCGACGTTTTCACCTCACACCGTTCTCGCTCCGGAAGGAGTCAGAGAGT ATTTCCGTCAACTTGCAACAAGAGACGGACTTGGTGTACGGCTCCATAACAAAGCCCTGAGAACTCAGGCGCGCAGTGAA ACGTTACACGTTCTGAGCGGGATCTACTCATTTGAATTTGAAGTGGACCAGGTACTCCTGACTTTTCCGTCAAGGTTTAC CTTTCTGGTCGACCTGTCCGAAGAACGGCCAATTATTCACCACCACTCCTCTCAGGTACCGAGAAACCTTTCCTGA
Upstream 100 bases:
>100_bases GTTTAGCGAAAAAAAACCTTACATTAGGCCGTTTAAGCAAAGAATGAATCGCCATAAGGTATTTCATATCGTCAGCCATC CATAAAACAACGTTCAAGCA
Downstream 100 bases:
>100_bases AGCAGGGGAAACCCAGGTTGGAGGGAAATTCAGACCTGTTCCCGTTCATGCATCATGATGATTGGCAAACAGGTTCTGAT CGACCGGGTAGATGTCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MMKFNSAEDVLFQWVTRVCNGNPDTIASLYHDHAVLIPTFSPHTVLAPEGVREYFRQLATRDGLGVRLHNKALRTQARSE TLHVLSGIYSFEFEVDQVLLTFPSRFTFLVDLSEERPIIHHHSSQVPRNLS
Sequences:
>Translated_131_residues MMKFNSAEDVLFQWVTRVCNGNPDTIASLYHDHAVLIPTFSPHTVLAPEGVREYFRQLATRDGLGVRLHNKALRTQARSE TLHVLSGIYSFEFEVDQVLLTFPSRFTFLVDLSEERPIIHHHSSQVPRNLS >Mature_131_residues MMKFNSAEDVLFQWVTRVCNGNPDTIASLYHDHAVLIPTFSPHTVLAPEGVREYFRQLATRDGLGVRLHNKALRTQARSE TLHVLSGIYSFEFEVDQVLLTFPSRFTFLVDLSEERPIIHHHSSQVPRNLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15017; Mature: 15017
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKFNSAEDVLFQWVTRVCNGNPDTIASLYHDHAVLIPTFSPHTVLAPEGVREYFRQLAT CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCEEECCHHHHHHHHHHHC RDGLGVRLHNKALRTQARSETLHVLSGIYSFEFEVDQVLLTFPSRFTFLVDLSEERPIIH CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHEEECCCCEEEEEECCCCCCEEE HHSSQVPRNLS CCCCCCCCCCC >Mature Secondary Structure MMKFNSAEDVLFQWVTRVCNGNPDTIASLYHDHAVLIPTFSPHTVLAPEGVREYFRQLAT CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCEEECCHHHHHHHHHHHC RDGLGVRLHNKALRTQARSETLHVLSGIYSFEFEVDQVLLTFPSRFTFLVDLSEERPIIH CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHEEECCCCEEEEEECCCCCCEEE HHSSQVPRNLS CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA