Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is prs [H]
Identifier: 119357475
GI number: 119357475
Start: 1902273
End: 1903256
Strand: Direct
Name: prs [H]
Synonym: Cpha266_1674
Alternate gene names: 119357475
Gene position: 1902273-1903256 (Clockwise)
Preceding gene: 119357473
Following gene: 119357476
Centisome position: 60.7
GC content: 48.27
Gene sequence:
>984_bases ATGCAGGATGCATTGGTAAAACCAATCAAAATTTTTGCAGGCCGCAGCAATCCGGCCATTGCAGAAAAAATCGCCGAATA TCTCGACATGCCGCTCTGCGATGCAAAGGTCGAGAATTTTTCTGACGGGGAAATATCTGTTAATTACTTCGAATCGATCC GAGGCTCGGATCTGTTCATTATTCAATCGACAAATCCCCCTGCCGACAACCTGATGGAGCTCCTGATCATGATCGATGCC GCCAGACGATCATCAGCAGCGAGAATAACGGCAGTTATCCCCTACTACGGCTACGCACGGCAGGACAGAAAAGACAAGCC GCGTGTCGCCATTACAGCAAAGCTGGTTGCGAACCTGCTGACCACTGCCGGAGCAAACAGAATTCTGACTATGGATCTTC ATGCGCCGCAAATCCAGGGATTTTTTGATATTCCTTTTGACCATCTCTACTCCAGCGTCATGCTGATCAACGACATCCGC CAGAGGGATTTTCGTGAAAATCTTGTCGTAGCATCTCCCGATGTGGGCGGCGTAAAACTTGCCCGAAAATTTGCAGAAGA GCTCGGCACAGACCTGGTCATTGTCGACAAAAGAAGACCGAAAGCAAACGTTGCTGAAGTCATGAACATCATTGGCGACG TCAGTGGCAAAAACGTTCTGCTCGTCGACGATATGATCGATACGGCAGGAACCCTTGTCAATGCAGCAAAGGCAATACGC GATGCAGGCGGACTGAGAGTCTATGCCGCCGCGACACATCCTATTCTTTCAGGCCCGGCAATAGAAAGAATAAATGCATC CGTCATTGAAAAGCTGATCGTTTCCGATTCTGTAGTGACCAATCATGCCTACTCACCGAAAATCGAAACCGTCACAGTCA GCTCGCTGTTCGGTGAAGCGATCAAAAGAATATACGAGGACGATTCGGTCAGTTGCCTCTTCGACAGTAAAGACATAAGC ACCAAGATCAAAAACTATCATTAA
Upstream 100 bases:
>100_bases ATTCGAAGTCCAGAGCGGTTATCAGTGGGTATGGTAACAATGCCGGGACGAGCTGCTTAAAACGAATTACTGACGTTAAT ATAACCGGTTTCATCTGAAA
Downstream 100 bases:
>100_bases CATCACAAGAGAAAAAAAGAGATAGAGGAAAAGCATGGAAATCATCGCATTGGGGGTTGAACCTCGCATTATCAGAAAAA AAGAAGCGGCAAAACTGCGT
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MQDALVKPIKIFAGRSNPAIAEKIAEYLDMPLCDAKVENFSDGEISVNYFESIRGSDLFIIQSTNPPADNLMELLIMIDA ARRSSAARITAVIPYYGYARQDRKDKPRVAITAKLVANLLTTAGANRILTMDLHAPQIQGFFDIPFDHLYSSVMLINDIR QRDFRENLVVASPDVGGVKLARKFAEELGTDLVIVDKRRPKANVAEVMNIIGDVSGKNVLLVDDMIDTAGTLVNAAKAIR DAGGLRVYAAATHPILSGPAIERINASVIEKLIVSDSVVTNHAYSPKIETVTVSSLFGEAIKRIYEDDSVSCLFDSKDIS TKIKNYH
Sequences:
>Translated_327_residues MQDALVKPIKIFAGRSNPAIAEKIAEYLDMPLCDAKVENFSDGEISVNYFESIRGSDLFIIQSTNPPADNLMELLIMIDA ARRSSAARITAVIPYYGYARQDRKDKPRVAITAKLVANLLTTAGANRILTMDLHAPQIQGFFDIPFDHLYSSVMLINDIR QRDFRENLVVASPDVGGVKLARKFAEELGTDLVIVDKRRPKANVAEVMNIIGDVSGKNVLLVDDMIDTAGTLVNAAKAIR DAGGLRVYAAATHPILSGPAIERINASVIEKLIVSDSVVTNHAYSPKIETVTVSSLFGEAIKRIYEDDSVSCLFDSKDIS TKIKNYH >Mature_327_residues MQDALVKPIKIFAGRSNPAIAEKIAEYLDMPLCDAKVENFSDGEISVNYFESIRGSDLFIIQSTNPPADNLMELLIMIDA ARRSSAARITAVIPYYGYARQDRKDKPRVAITAKLVANLLTTAGANRILTMDLHAPQIQGFFDIPFDHLYSSVMLINDIR QRDFRENLVVASPDVGGVKLARKFAEELGTDLVIVDKRRPKANVAEVMNIIGDVSGKNVLLVDDMIDTAGTLVNAAKAIR DAGGLRVYAAATHPILSGPAIERINASVIEKLIVSDSVVTNHAYSPKIETVTVSSLFGEAIKRIYEDDSVSCLFDSKDIS TKIKNYH
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=311, Percent_Identity=46.6237942122186, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI28557709, Length=310, Percent_Identity=45.4838709677419, Blast_Score=268, Evalue=5e-72, Organism=Homo sapiens, GI4506129, Length=310, Percent_Identity=44.8387096774194, Blast_Score=268, Evalue=6e-72, Organism=Homo sapiens, GI84875539, Length=313, Percent_Identity=44.408945686901, Blast_Score=262, Evalue=3e-70, Organism=Homo sapiens, GI4506133, Length=344, Percent_Identity=34.0116279069767, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI194018537, Length=346, Percent_Identity=34.6820809248555, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI310128524, Length=140, Percent_Identity=33.5714285714286, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI310115209, Length=140, Percent_Identity=33.5714285714286, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI310118259, Length=140, Percent_Identity=33.5714285714286, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI310119946, Length=140, Percent_Identity=33.5714285714286, Blast_Score=87, Evalue=2e-17, Organism=Escherichia coli, GI1787458, Length=312, Percent_Identity=52.5641025641026, Blast_Score=323, Evalue=8e-90, Organism=Caenorhabditis elegans, GI25149168, Length=311, Percent_Identity=45.016077170418, Blast_Score=271, Evalue=5e-73, Organism=Caenorhabditis elegans, GI17554702, Length=318, Percent_Identity=44.3396226415094, Blast_Score=271, Evalue=5e-73, Organism=Caenorhabditis elegans, GI71989924, Length=317, Percent_Identity=44.4794952681388, Blast_Score=269, Evalue=1e-72, Organism=Caenorhabditis elegans, GI17554704, Length=309, Percent_Identity=44.6601941747573, Blast_Score=267, Evalue=4e-72, Organism=Caenorhabditis elegans, GI17570245, Length=337, Percent_Identity=32.6409495548961, Blast_Score=172, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6319403, Length=318, Percent_Identity=44.9685534591195, Blast_Score=259, Evalue=6e-70, Organism=Saccharomyces cerevisiae, GI6320946, Length=309, Percent_Identity=44.9838187702265, Blast_Score=255, Evalue=7e-69, Organism=Saccharomyces cerevisiae, GI6321776, Length=310, Percent_Identity=41.2903225806452, Blast_Score=239, Evalue=6e-64, Organism=Saccharomyces cerevisiae, GI6322667, Length=201, Percent_Identity=39.8009950248756, Blast_Score=147, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6324511, Length=110, Percent_Identity=40.9090909090909, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI21355239, Length=310, Percent_Identity=46.4516129032258, Blast_Score=276, Evalue=2e-74, Organism=Drosophila melanogaster, GI45551540, Length=333, Percent_Identity=43.2432432432432, Blast_Score=263, Evalue=1e-70, Organism=Drosophila melanogaster, GI24651458, Length=362, Percent_Identity=32.5966850828729, Blast_Score=178, Evalue=4e-45, Organism=Drosophila melanogaster, GI24651456, Length=362, Percent_Identity=32.5966850828729, Blast_Score=178, Evalue=4e-45, Organism=Drosophila melanogaster, GI281362873, Length=362, Percent_Identity=32.5966850828729, Blast_Score=178, Evalue=4e-45, Organism=Drosophila melanogaster, GI24651454, Length=362, Percent_Identity=32.5966850828729, Blast_Score=178, Evalue=4e-45, Organism=Drosophila melanogaster, GI24651462, Length=210, Percent_Identity=37.6190476190476, Blast_Score=127, Evalue=7e-30, Organism=Drosophila melanogaster, GI24651464, Length=210, Percent_Identity=37.6190476190476, Blast_Score=127, Evalue=7e-30, Organism=Drosophila melanogaster, GI45552010, Length=210, Percent_Identity=37.6190476190476, Blast_Score=127, Evalue=8e-30,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 35855; Mature: 35855
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDALVKPIKIFAGRSNPAIAEKIAEYLDMPLCDAKVENFSDGEISVNYFESIRGSDLFI CCCCHHCCHHEEECCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCEEEHHHHHCCCCEEEE IQSTNPPADNLMELLIMIDAARRSSAARITAVIPYYGYARQDRKDKPRVAITAKLVANLL EECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHH TTAGANRILTMDLHAPQIQGFFDIPFDHLYSSVMLINDIRQRDFRENLVVASPDVGGVKL HHCCCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHH ARKFAEELGTDLVIVDKRRPKANVAEVMNIIGDVSGKNVLLVDDMIDTAGTLVNAAKAIR HHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHH DAGGLRVYAAATHPILSGPAIERINASVIEKLIVSDSVVTNHAYSPKIETVTVSSLFGEA CCCCEEEEEEECCCCCCCCHHHHHCHHHHHHHHHCCHHHCCCCCCCCEEEEEHHHHHHHH IKRIYEDDSVSCLFDSKDISTKIKNYH HHHHHCCCCEEEEECCCCHHHHCCCCC >Mature Secondary Structure MQDALVKPIKIFAGRSNPAIAEKIAEYLDMPLCDAKVENFSDGEISVNYFESIRGSDLFI CCCCHHCCHHEEECCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCEEEHHHHHCCCCEEEE IQSTNPPADNLMELLIMIDAARRSSAARITAVIPYYGYARQDRKDKPRVAITAKLVANLL EECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHH TTAGANRILTMDLHAPQIQGFFDIPFDHLYSSVMLINDIRQRDFRENLVVASPDVGGVKL HHCCCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHH ARKFAEELGTDLVIVDKRRPKANVAEVMNIIGDVSGKNVLLVDDMIDTAGTLVNAAKAIR HHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHH DAGGLRVYAAATHPILSGPAIERINASVIEKLIVSDSVVTNHAYSPKIETVTVSSLFGEA CCCCEEEEEEECCCCCCCCHHHHHCHHHHHHHHHCCHHHCCCCCCCCEEEEEHHHHHHHH IKRIYEDDSVSCLFDSKDISTKIKNYH HHHHHCCCCEEEEECCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]