Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is mrr [C]
Identifier: 119357415
GI number: 119357415
Start: 1835686
End: 1837443
Strand: Direct
Name: mrr [C]
Synonym: Cpha266_1614
Alternate gene names: 119357415
Gene position: 1835686-1837443 (Clockwise)
Preceding gene: 119357407
Following gene: 119357416
Centisome position: 58.58
GC content: 47.95
Gene sequence:
>1758_bases ATGAAAACACGCATCGGCCAATTGTCCCTAAACTACAGTGCACGCGGCATTCCCACTTACACACTCGAACTCTGGCACGA CGGACTGAAAAAGCATCGCCTTATTCGTGGCGAAAGTGAATCAATCGTCAATCTGAAGGCAACACTGCAAGTTGAAGAAT GGGAGGAACGCTGGGCAGTTATTGACGCTAAAGAGCGTGACCGCTCACAGAAACTCGCCGGAAAACGGCAGATTGAAGAA AACAAATCGCTAGCCGTGGAACGGACTGCTGAAGCCCAGCAAGAACTCGAACGGCTAAATTCGCTTCTGAAGGCAACCTT GGCGGTTGATGACACTATTGATTGGGAGAAGCTAAAGGATAAAACGCCCTACCCGGAAAAAAAACCGGTGATGCCACCCA CACCACGGGAGCCCGTATTGCCGCAAATGCCAAGCGAACCATTACGAGGTGACCAAAAATATATTCCCTCATTAGGAATT CTCGACAAGCTGATAGTCTCTCGAAAGGAACGTGCGGTTTCGGAAAAGCTGGCACTGTTTGCCTCCGATCACAAGTCGTG GCAGGACGAGGTAGCCATAATTACACGCACACACACAGCAGCGCTTTTGGTACATGGAAAGTCCGTTGCCGCCATGCGTG AAGAACACGAAAAGCAAGTTTCAGCATGGGACAAACGACGCAACGAGTATTTAAACAAACAATCTGCTACACATGCTGAA GTTGACGCAAAACGCACTACCTATGAGTCCAGCGATCCTGATGCAATTACCGAATACTGCGATTTAGTTCTTTCATCCTC GCGCTATCCAGTCTATTTCCCGCAGGAATATGATCTCGACTATGACGCAGCAACTAAAACAATCATCGTTGATTACCGGC TTCCCGCGCCAGACGATCTTCCACGTTTGAAGGCAGTTAAGTACGTTGCAAGCCGTGATGAGTTTGAAGAGCAGTATATT TCCGAGGCTCAATCATCCAAGCTCTACGACGATATTTTATATCAAGTCGTCCTACGCACAGTTCACGAGTTGTTCGAAGC GGACATCATCTCTGCAATTGAGACAATTGTTTTCAATGGTATTGTCACTTCAACGGATCGTACAACCGGTAAGCCAACGA CAGCATGCGTTCTCTCACTGCGTGCCAATCGTGCTGAGTTCTTGGAGATTAACCTTTCACAAGTCGATCCGAAGGCGTGT TTTAAGTCGCTCAAAGGTGTCGGAAGCTCAAAGCTCCATGGCTTGTCGCCGGTTCCACCCATCATGCAGCTTCGGAGGGA CGATGGACGATTCGTATCCGCTTACGAAGTCGCCAATACGCTTGATAGCAGCGTAAATTTAGCTGCTATGGACTGGGAGG ACTTCGAACATTTGATTCGTGAGATTTTTGAAAAGGAATTTTCATCATCTGGTGGCGAAGTTAAGGTAACTCAAGCAAGT CGCGATGGAGGTGTTGATGCCATTGCTTTTGATCCTGATCCCATTAGGGGCGGAAAGATCGTTATTCAAGCAAAGCGATA TACCAACACGGTCGGCGTTGGTGCGGTACGTGATCTCTACGGCACCGTAGTGAATGAAGGTGCAACAAAGGGTATTTTGG TTACTACGTCCGACTATGGCCCCGACTCTTATGCCTTTGCCAATGGAAAACCCCTTGTTCTTCTCAGCGGTGCTAACTTG TTACATATTCTGGAGAAACATGGTCATCAAGCCCGCATTGACATACAGGAAGCAAGAAAGCTTACTGCAAAGCTATGA
Upstream 100 bases:
>100_bases TACAGAAAGAAGCTTTCTGCTTTTACTGAATAAGGCAGATCACTCTAAACATTGTTCGGCGGCTGTCGCTGCTCAATTCC AGCTTTTCGGGAACTAAAGA
Downstream 100 bases:
>100_bases AGCAATCTAACCCGGCGCTCAACCAGACGCTGCGCGATAAAACCGCGCAGCGTCTGTGAGCCCTAGCGTTAAATATCCAC GTTACCTCCACGCATCAGTG
Product: restriction endonuclease
Products: NA
Alternate protein names: Mrr Restriction System Protein; Bacterial Stress Protein; Restriction Endonuclease-Like Protein; DNA Restriction; Restriction System Protein; Restriction Endonuclease Superfamily Protein; Restriction Of Methylated Adenine Protein; Endonuclease
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MKTRIGQLSLNYSARGIPTYTLELWHDGLKKHRLIRGESESIVNLKATLQVEEWEERWAVIDAKERDRSQKLAGKRQIEE NKSLAVERTAEAQQELERLNSLLKATLAVDDTIDWEKLKDKTPYPEKKPVMPPTPREPVLPQMPSEPLRGDQKYIPSLGI LDKLIVSRKERAVSEKLALFASDHKSWQDEVAIITRTHTAALLVHGKSVAAMREEHEKQVSAWDKRRNEYLNKQSATHAE VDAKRTTYESSDPDAITEYCDLVLSSSRYPVYFPQEYDLDYDAATKTIIVDYRLPAPDDLPRLKAVKYVASRDEFEEQYI SEAQSSKLYDDILYQVVLRTVHELFEADIISAIETIVFNGIVTSTDRTTGKPTTACVLSLRANRAEFLEINLSQVDPKAC FKSLKGVGSSKLHGLSPVPPIMQLRRDDGRFVSAYEVANTLDSSVNLAAMDWEDFEHLIREIFEKEFSSSGGEVKVTQAS RDGGVDAIAFDPDPIRGGKIVIQAKRYTNTVGVGAVRDLYGTVVNEGATKGILVTTSDYGPDSYAFANGKPLVLLSGANL LHILEKHGHQARIDIQEARKLTAKL
Sequences:
>Translated_585_residues MKTRIGQLSLNYSARGIPTYTLELWHDGLKKHRLIRGESESIVNLKATLQVEEWEERWAVIDAKERDRSQKLAGKRQIEE NKSLAVERTAEAQQELERLNSLLKATLAVDDTIDWEKLKDKTPYPEKKPVMPPTPREPVLPQMPSEPLRGDQKYIPSLGI LDKLIVSRKERAVSEKLALFASDHKSWQDEVAIITRTHTAALLVHGKSVAAMREEHEKQVSAWDKRRNEYLNKQSATHAE VDAKRTTYESSDPDAITEYCDLVLSSSRYPVYFPQEYDLDYDAATKTIIVDYRLPAPDDLPRLKAVKYVASRDEFEEQYI SEAQSSKLYDDILYQVVLRTVHELFEADIISAIETIVFNGIVTSTDRTTGKPTTACVLSLRANRAEFLEINLSQVDPKAC FKSLKGVGSSKLHGLSPVPPIMQLRRDDGRFVSAYEVANTLDSSVNLAAMDWEDFEHLIREIFEKEFSSSGGEVKVTQAS RDGGVDAIAFDPDPIRGGKIVIQAKRYTNTVGVGAVRDLYGTVVNEGATKGILVTTSDYGPDSYAFANGKPLVLLSGANL LHILEKHGHQARIDIQEARKLTAKL >Mature_585_residues MKTRIGQLSLNYSARGIPTYTLELWHDGLKKHRLIRGESESIVNLKATLQVEEWEERWAVIDAKERDRSQKLAGKRQIEE NKSLAVERTAEAQQELERLNSLLKATLAVDDTIDWEKLKDKTPYPEKKPVMPPTPREPVLPQMPSEPLRGDQKYIPSLGI LDKLIVSRKERAVSEKLALFASDHKSWQDEVAIITRTHTAALLVHGKSVAAMREEHEKQVSAWDKRRNEYLNKQSATHAE VDAKRTTYESSDPDAITEYCDLVLSSSRYPVYFPQEYDLDYDAATKTIIVDYRLPAPDDLPRLKAVKYVASRDEFEEQYI SEAQSSKLYDDILYQVVLRTVHELFEADIISAIETIVFNGIVTSTDRTTGKPTTACVLSLRANRAEFLEINLSQVDPKAC FKSLKGVGSSKLHGLSPVPPIMQLRRDDGRFVSAYEVANTLDSSVNLAAMDWEDFEHLIREIFEKEFSSSGGEVKVTQAS RDGGVDAIAFDPDPIRGGKIVIQAKRYTNTVGVGAVRDLYGTVVNEGATKGILVTTSDYGPDSYAFANGKPLVLLSGANL LHILEKHGHQARIDIQEARKLTAKL
Specific function: Involved In The Acceptance Of Foreign DNA Which Is Modified. Restricts Both Adenine- And Cytosine-Methylated DNA. [C]
COG id: COG1715
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65668; Mature: 65668
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRIGQLSLNYSARGIPTYTLELWHDGLKKHRLIRGESESIVNLKATLQVEEWEERWAV CCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHEE IDAKERDRSQKLAGKRQIEENKSLAVERTAEAQQELERLNSLLKATLAVDDTIDWEKLKD ECCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC KTPYPEKKPVMPPTPREPVLPQMPSEPLRGDQKYIPSLGILDKLIVSRKERAVSEKLALF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ASDHKSWQDEVAIITRTHTAALLVHGKSVAAMREEHEKQVSAWDKRRNEYLNKQSATHAE HHCCCCCCCCEEEEEEECEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VDAKRTTYESSDPDAITEYCDLVLSSSRYPVYFPQEYDLDYDAATKTIIVDYRLPAPDDL CCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEEEECCCCCCC PRLKAVKYVASRDEFEEQYISEAQSSKLYDDILYQVVLRTVHELFEADIISAIETIVFNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IVTSTDRTTGKPTTACVLSLRANRAEFLEINLSQVDPKACFKSLKGVGSSKLHGLSPVPP EEECCCCCCCCCHHHEEEEHHCCCEEEEEEEHHHCCHHHHHHHHHCCCCCCCCCCCCCCH IMQLRRDDGRFVSAYEVANTLDSSVNLAAMDWEDFEHLIREIFEKEFSSSGGEVKVTQAS HHHHHCCCCCEEHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEECC RDGGVDAIAFDPDPIRGGKIVIQAKRYTNTVGVGAVRDLYGTVVNEGATKGILVTTSDYG CCCCCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCC PDSYAFANGKPLVLLSGANLLHILEKHGHQARIDIQEARKLTAKL CCCCEECCCCCEEEECCCHHHHHHHHCCCEEEEEHHHHHHHHHCC >Mature Secondary Structure MKTRIGQLSLNYSARGIPTYTLELWHDGLKKHRLIRGESESIVNLKATLQVEEWEERWAV CCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHEE IDAKERDRSQKLAGKRQIEENKSLAVERTAEAQQELERLNSLLKATLAVDDTIDWEKLKD ECCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC KTPYPEKKPVMPPTPREPVLPQMPSEPLRGDQKYIPSLGILDKLIVSRKERAVSEKLALF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ASDHKSWQDEVAIITRTHTAALLVHGKSVAAMREEHEKQVSAWDKRRNEYLNKQSATHAE HHCCCCCCCCEEEEEEECEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VDAKRTTYESSDPDAITEYCDLVLSSSRYPVYFPQEYDLDYDAATKTIIVDYRLPAPDDL CCCHHCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEEEECCCCCCC PRLKAVKYVASRDEFEEQYISEAQSSKLYDDILYQVVLRTVHELFEADIISAIETIVFNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IVTSTDRTTGKPTTACVLSLRANRAEFLEINLSQVDPKACFKSLKGVGSSKLHGLSPVPP EEECCCCCCCCCHHHEEEEHHCCCEEEEEEEHHHCCHHHHHHHHHCCCCCCCCCCCCCCH IMQLRRDDGRFVSAYEVANTLDSSVNLAAMDWEDFEHLIREIFEKEFSSSGGEVKVTQAS HHHHHCCCCCEEHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEECC RDGGVDAIAFDPDPIRGGKIVIQAKRYTNTVGVGAVRDLYGTVVNEGATKGILVTTSDYG CCCCCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCC PDSYAFANGKPLVLLSGANLLHILEKHGHQARIDIQEARKLTAKL CCCCEECCCCCEEEECCCHHHHHHHHCCCEEEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA