Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is yifN [C]
Identifier: 119357407
GI number: 119357407
Start: 1827296
End: 1827700
Strand: Direct
Name: yifN [C]
Synonym: Cpha266_1606
Alternate gene names: 119357407
Gene position: 1827296-1827700 (Clockwise)
Preceding gene: 119357406
Following gene: 119357415
Centisome position: 58.31
GC content: 44.94
Gene sequence:
>405_bases ATGAGCCTCCCTTATCATCCTAAACAAGGCGCCATCGTTATTTGTGATTTCAAAGGTTTTGTTCCTCCTGAAATGGTTAA GCGAAGGCCTGCAGTTATCGTTTCTCCCCGGATGCGTAAACGAGAGGGGCTTTGCACCATTGTCCCTTTAAGCACAACAC CACCAAAGGATATCGAGGCATACCACTACAAGTTGTTCATTGACCCGGTTCTTCCGGAACCATATAACGCTGAATTTCAT TGGGTAAAAGCCGATATGGTCTATACCGTCTCATTAGACAGGCTTTATCTGCCGTTCTGCGGCAAAGATCAGGGGAAAAG AATGTACGATAAGAGGATTATAAGCAGAGACGACCTTGTCAACATCCAGCAATGTATTTTGGCGGGATTAGGAATAAACG CTTGA
Upstream 100 bases:
>100_bases AGTACTTCGGTCTCGATCCCCGAACCATGAAAATCTATCTCCGCGAAGACCGCGATGCTAATAAAGTAAATTCAGATCAA GCAAGCTCAACGCAGCACTG
Downstream 100 bases:
>100_bases CGATGACTCCTCAAATGAGTACATTGTCCCTGTACCCGCTCTCCTGACTTGTCAAGATCGGGCTTAAGTCCACTTCGGTG GCCGCCATGCAAGAGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSLPYHPKQGAIVICDFKGFVPPEMVKRRPAVIVSPRMRKREGLCTIVPLSTTPPKDIEAYHYKLFIDPVLPEPYNAEFH WVKADMVYTVSLDRLYLPFCGKDQGKRMYDKRIISRDDLVNIQQCILAGLGINA
Sequences:
>Translated_134_residues MSLPYHPKQGAIVICDFKGFVPPEMVKRRPAVIVSPRMRKREGLCTIVPLSTTPPKDIEAYHYKLFIDPVLPEPYNAEFH WVKADMVYTVSLDRLYLPFCGKDQGKRMYDKRIISRDDLVNIQQCILAGLGINA >Mature_133_residues SLPYHPKQGAIVICDFKGFVPPEMVKRRPAVIVSPRMRKREGLCTIVPLSTTPPKDIEAYHYKLFIDPVLPEPYNAEFHW VKADMVYTVSLDRLYLPFCGKDQGKRMYDKRIISRDDLVNIQQCILAGLGINA
Specific function: Unknown
COG id: COG3692
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15365; Mature: 15234
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPYHPKQGAIVICDFKGFVPPEMVKRRPAVIVSPRMRKREGLCTIVPLSTTPPKDIEA CCCCCCCCCCEEEEEECCCCCCHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCE YHYKLFIDPVLPEPYNAEFHWVKADMVYTVSLDRLYLPFCGKDQGKRMYDKRIISRDDLV EEEEEEEECCCCCCCCCEEEEEEEEEEEEEEECEEEECCCCCCCCCHHHHHHHCCCCCCC NIQQCILAGLGINA CHHHHHHHCCCCCC >Mature Secondary Structure SLPYHPKQGAIVICDFKGFVPPEMVKRRPAVIVSPRMRKREGLCTIVPLSTTPPKDIEA CCCCCCCCCEEEEEECCCCCCHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCE YHYKLFIDPVLPEPYNAEFHWVKADMVYTVSLDRLYLPFCGKDQGKRMYDKRIISRDDLV EEEEEEEECCCCCCCCCEEEEEEEEEEEEEEECEEEECCCCCCCCCHHHHHHHCCCCCCC NIQQCILAGLGINA CHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA