Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is mrr [H]
Identifier: 119357416
GI number: 119357416
Start: 1837573
End: 1838439
Strand: Direct
Name: mrr [H]
Synonym: Cpha266_1615
Alternate gene names: 119357416
Gene position: 1837573-1838439 (Clockwise)
Preceding gene: 119357415
Following gene: 119357417
Centisome position: 58.64
GC content: 46.83
Gene sequence:
>867_bases ATGAAAGCAAAAGATAAAGGCCCGCAATTTATAAGGTTTTTCAAGCCAGTAATAGAAGCTCTCAAAGAATTGGATGGCTC AGGTACAGCTGCCGAGGTAATCGATCGTGCGATTGTCAATATGAACATCTCCGAAAAAGAGCAGCAGGCGACTACAAAAA ACGGGCAATCCCGCGTTCGTAATCAGGTGAATTGGGCTCGGCTCTACCTGGTACATGCTGGTTACCTTGACTCCTCGAAA CGCGGTGTATGGAGCCTCACCGACAAAGGAATATCGATTGACATAAGTTCATTTGATCCGTACGCAGCTTTCAAATCGGT GCAAGACCACTTTAAAGATGAAAAGAAAGCTCAGAATCAACCGGACTCATCAGCGGCAGAATCAGAAGAGATACCTGATG ACGAGCAAAATCACCGGGCAAAATTACTTGATCTTATAAAAGGACTACCCCCCTCAGGCTTTGAAAGATTAAGCCAGAGA TTGCTCAGGGAATCTGGCTTCCAGCAGGTTGTTGTCACCGGAAAAAGCGGAGATGGTGGCATTGACGGTATCGGAATTCT GCAGGTCAACCCATTTGTCAGCTTCAATGTCCTCTTCCAGTGCAAGCGCTACCAAGGTGCTGTAACGCCTTCTCAGGTTC GTGATTTTCGTGGAGCAATGCAGGGCAGAGCAGATAAAGGGATTGTTATTACCACCGGAACCTTTACCGTTGAGGCAACA AAAGAAGCCCGCAGGGATGGGGTTCCACCGATAGAGCTTGTTGATGGTCAGCTCTTGGTTGAAATGTTTGAGAGGCTCGA ACTCGGTCTCATTCCTCGCAGGACATTCGATATCGACGAAAAGTTTTTCGAGGATTTCAGAATATGA
Upstream 100 bases:
>100_bases CTGCGCGATAAAACCGCGCAGCGTCTGTGAGCCCTAGCGTTAAATATCCACGTTACCTCCACGCATCAGTGTTTTAAATT CAATTCGCACGCCCTACGAC
Downstream 100 bases:
>100_bases ACAGATGGAACATCCCTGATTGGCTTGAACAGGAGGTAACCCAGAGGGATACTCATTGCGTCTATTGCGGAGTTGAGTTC AGTCATTCCTCTCAGTCGAG
Product: restriction endonuclease
Products: NA
Alternate protein names: EcoKMrr [H]
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MKAKDKGPQFIRFFKPVIEALKELDGSGTAAEVIDRAIVNMNISEKEQQATTKNGQSRVRNQVNWARLYLVHAGYLDSSK RGVWSLTDKGISIDISSFDPYAAFKSVQDHFKDEKKAQNQPDSSAAESEEIPDDEQNHRAKLLDLIKGLPPSGFERLSQR LLRESGFQQVVVTGKSGDGGIDGIGILQVNPFVSFNVLFQCKRYQGAVTPSQVRDFRGAMQGRADKGIVITTGTFTVEAT KEARRDGVPPIELVDGQLLVEMFERLELGLIPRRTFDIDEKFFEDFRI
Sequences:
>Translated_288_residues MKAKDKGPQFIRFFKPVIEALKELDGSGTAAEVIDRAIVNMNISEKEQQATTKNGQSRVRNQVNWARLYLVHAGYLDSSK RGVWSLTDKGISIDISSFDPYAAFKSVQDHFKDEKKAQNQPDSSAAESEEIPDDEQNHRAKLLDLIKGLPPSGFERLSQR LLRESGFQQVVVTGKSGDGGIDGIGILQVNPFVSFNVLFQCKRYQGAVTPSQVRDFRGAMQGRADKGIVITTGTFTVEAT KEARRDGVPPIELVDGQLLVEMFERLELGLIPRRTFDIDEKFFEDFRI >Mature_288_residues MKAKDKGPQFIRFFKPVIEALKELDGSGTAAEVIDRAIVNMNISEKEQQATTKNGQSRVRNQVNWARLYLVHAGYLDSSK RGVWSLTDKGISIDISSFDPYAAFKSVQDHFKDEKKAQNQPDSSAAESEEIPDDEQNHRAKLLDLIKGLPPSGFERLSQR LLRESGFQQVVVTGKSGDGGIDGIGILQVNPFVSFNVLFQCKRYQGAVTPSQVRDFRGAMQGRADKGIVITTGTFTVEAT KEARRDGVPPIELVDGQLLVEMFERLELGLIPRRTFDIDEKFFEDFRI
Specific function: Involved in the acceptance of foreign DNA which is modified. Restricts both adenine- and cytosine-methylated DNA [H]
COG id: COG1715
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790811, Length=308, Percent_Identity=26.9480519480519, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011856 - InterPro: IPR011335 - InterPro: IPR007560 [H]
Pfam domain/function: PF04471 Mrr_cat [H]
EC number: NA
Molecular weight: Translated: 32228; Mature: 32228
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKDKGPQFIRFFKPVIEALKELDGSGTAAEVIDRAIVNMNISEKEQQATTKNGQSRVR CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHH NQVNWARLYLVHAGYLDSSKRGVWSLTDKGISIDISSFDPYAAFKSVQDHFKDEKKAQNQ HHHHHHEEEEEEECCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCC PDSSAAESEEIPDDEQNHRAKLLDLIKGLPPSGFERLSQRLLRESGFQQVVVTGKSGDGG CCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC IDGIGILQVNPFVSFNVLFQCKRYQGAVTPSQVRDFRGAMQGRADKGIVITTGTFTVEAT CCCEEEEEECCCEEEHHHHEEHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECEEEEEEC KEARRDGVPPIELVDGQLLVEMFERLELGLIPRRTFDIDEKFFEDFRI HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MKAKDKGPQFIRFFKPVIEALKELDGSGTAAEVIDRAIVNMNISEKEQQATTKNGQSRVR CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHH NQVNWARLYLVHAGYLDSSKRGVWSLTDKGISIDISSFDPYAAFKSVQDHFKDEKKAQNQ HHHHHHEEEEEEECCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCC PDSSAAESEEIPDDEQNHRAKLLDLIKGLPPSGFERLSQRLLRESGFQQVVVTGKSGDGG CCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC IDGIGILQVNPFVSFNVLFQCKRYQGAVTPSQVRDFRGAMQGRADKGIVITTGTFTVEAT CCCEEEEEECCCEEEHHHHEEHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECEEEEEEC KEARRDGVPPIELVDGQLLVEMFERLELGLIPRRTFDIDEKFFEDFRI HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650347; 7610040; 9278503 [H]