Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357263
Identifier: 119357263
GI number: 119357263
Start: 1657634
End: 1658050
Strand: Direct
Name: 119357263
Synonym: Cpha266_1455
Alternate gene names: NA
Gene position: 1657634-1658050 (Clockwise)
Preceding gene: 119357262
Following gene: 119357264
Centisome position: 52.89
GC content: 48.2
Gene sequence:
>417_bases ATGAGCATCATTTTTGTTTATAACGCTGACAGCGGCCTTCTGAGCGGCCTCTTCGATATTGGTCATAAAATCCTCAGTCC CTCAACCTACTCCTGCAACCTCTGCAAACTCACGTTCGAGACGCTGACCGAAAACCGCAAATGGCGGGAGTTCAGGGAAA GCGTGACCGTTGAGATGGAGTTTCTGCATCGAGATGAATTCGAAAAAAAATATGACCTGAAATTCGATTATCCGGTTGTC CTCCGTAAAAACAACAATATCGAGGTTATTCTTTCGAAGGAGGAGATCGACAGGTTCGAAAATCTCGACGATCTGATAGC AGGAGTAAGGAAAGTTCTGATGGCTGTGGGGAGTGGGGAGTGTCATCCCGACCTCCCTCTTCTGTCATCCCGACCTCAGG GAGGGATCTCTCCTTGA
Upstream 100 bases:
>100_bases TGCAAATACCCGGTACAAGGAACCCTCTGACATCGAATCAGGTTGATACTTCCATAACTGACTTAAAGAACCCGTCAGCC AGAAAAGAGGAGCATACACC
Downstream 100 bases:
>100_bases TCATGGATTTTTGATGGTTGGGAAAAAGTAAACCCGCAGCCATTAATTATAACGCAATGCTTTTATGAACAGTAACTATT ATCCCGCTCTTGGTTTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSIIFVYNADSGLLSGLFDIGHKILSPSTYSCNLCKLTFETLTENRKWREFRESVTVEMEFLHRDEFEKKYDLKFDYPVV LRKNNNIEVILSKEEIDRFENLDDLIAGVRKVLMAVGSGECHPDLPLLSSRPQGGISP
Sequences:
>Translated_138_residues MSIIFVYNADSGLLSGLFDIGHKILSPSTYSCNLCKLTFETLTENRKWREFRESVTVEMEFLHRDEFEKKYDLKFDYPVV LRKNNNIEVILSKEEIDRFENLDDLIAGVRKVLMAVGSGECHPDLPLLSSRPQGGISP >Mature_137_residues SIIFVYNADSGLLSGLFDIGHKILSPSTYSCNLCKLTFETLTENRKWREFRESVTVEMEFLHRDEFEKKYDLKFDYPVVL RKNNNIEVILSKEEIDRFENLDDLIAGVRKVLMAVGSGECHPDLPLLSSRPQGGISP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15830; Mature: 15699
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIFVYNADSGLLSGLFDIGHKILSPSTYSCNLCKLTFETLTENRKWREFRESVTVEME CEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHH FLHRDEFEKKYDLKFDYPVVLRKNNNIEVILSKEEIDRFENLDDLIAGVRKVLMAVGSGE HHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHCCCC CHPDLPLLSSRPQGGISP CCCCCCCCCCCCCCCCCC >Mature Secondary Structure SIIFVYNADSGLLSGLFDIGHKILSPSTYSCNLCKLTFETLTENRKWREFRESVTVEME EEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHH FLHRDEFEKKYDLKFDYPVVLRKNNNIEVILSKEEIDRFENLDDLIAGVRKVLMAVGSGE HHHHHCCCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHCCCC CHPDLPLLSSRPQGGISP CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA