Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is zupT [H]

Identifier: 119357264

GI number: 119357264

Start: 1658115

End: 1658918

Strand: Direct

Name: zupT [H]

Synonym: Cpha266_1456

Alternate gene names: 119357264

Gene position: 1658115-1658918 (Clockwise)

Preceding gene: 119357263

Following gene: 119357268

Centisome position: 52.91

GC content: 49.13

Gene sequence:

>804_bases
ATGAACAGTAACTATTATCCCGCTCTTGGTTTGACTCTCCTTGCGGGCCTTTCGACAGGTATCGGCAGTCTGCTTGCTTT
GATGGTAAACCATACCAACAAGAAGTTTCTGACTTTTGCACTGGGTTTTTCAGCCGGCATTATGCTTTACGTCTCTTTTG
TGGAGATCATGCCGCAGTCAGGTAATACGATTTTACAGCAGTTTCCTGCCGGTAATGCCGCATGGGTTACCACGACAGCT
TTTTTTGGCGGTATTTTTTTTATCTGGCTGATCGACCAGCTTGTACCTGATTTTGAAAACCCGCATGAAGTATCCATGAT
CGGCACCATGAATGCCGAACCGTCAGAGGACGCTCGTCTCCACCGGATGGGCATTTTTACCGCTGCCGCCATTGCTATCC
ATAATTTTCCCGAAGGGCTGGCCGTATTCTTCAGCGCCTTGTCAAACCAGGATCTCGGCGTTGTGATTGCCGCCACCATA
GCACTGCATAACATACCGGAAGGAATGGCTATTGCTGTACCGATCTATTTTGCCACAAAAAGCCGAATGAGAGCCTTCAG
CTACTCGTTTCTTTCCGGTCTTGCCGAACCTGTCGGAGCAATTATCGGCTACGCGCTTTTAAAGCCTTTTCTCAGTCCGC
TTGTGTTCGGCATCGTACTTGCTTCCGTGGCTGGCATCATGGTCTATATTTCGCTTGACGAGCTGCTACCTGCTGCCGAG
GAGTACGGCGAGCACCACATTGCAATTTCAGGACTGATTATCGGAATGGCAGTTATGGCTGCAAGTCTTCTTCTGCTTGT
CTGA

Upstream 100 bases:

>100_bases
CTGTCATCCCGACCTCAGGGAGGGATCTCTCCTTGATCATGGATTTTTGATGGTTGGGAAAAAGTAAACCCGCAGCCATT
AATTATAACGCAATGCTTTT

Downstream 100 bases:

>100_bases
AAAAAGGTTGTCGAGCGATTCAAAGCCTTTTCCATAAACAACAAAACCGATGGATGATTCAATTATCCCGTCGGTTTTGT
TGTCTGTTCCTGCCATCCGC

Product: zinc transporter ZupT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MNSNYYPALGLTLLAGLSTGIGSLLALMVNHTNKKFLTFALGFSAGIMLYVSFVEIMPQSGNTILQQFPAGNAAWVTTTA
FFGGIFFIWLIDQLVPDFENPHEVSMIGTMNAEPSEDARLHRMGIFTAAAIAIHNFPEGLAVFFSALSNQDLGVVIAATI
ALHNIPEGMAIAVPIYFATKSRMRAFSYSFLSGLAEPVGAIIGYALLKPFLSPLVFGIVLASVAGIMVYISLDELLPAAE
EYGEHHIAISGLIIGMAVMAASLLLLV

Sequences:

>Translated_267_residues
MNSNYYPALGLTLLAGLSTGIGSLLALMVNHTNKKFLTFALGFSAGIMLYVSFVEIMPQSGNTILQQFPAGNAAWVTTTA
FFGGIFFIWLIDQLVPDFENPHEVSMIGTMNAEPSEDARLHRMGIFTAAAIAIHNFPEGLAVFFSALSNQDLGVVIAATI
ALHNIPEGMAIAVPIYFATKSRMRAFSYSFLSGLAEPVGAIIGYALLKPFLSPLVFGIVLASVAGIMVYISLDELLPAAE
EYGEHHIAISGLIIGMAVMAASLLLLV
>Mature_267_residues
MNSNYYPALGLTLLAGLSTGIGSLLALMVNHTNKKFLTFALGFSAGIMLYVSFVEIMPQSGNTILQQFPAGNAAWVTTTA
FFGGIFFIWLIDQLVPDFENPHEVSMIGTMNAEPSEDARLHRMGIFTAAAIAIHNFPEGLAVFFSALSNQDLGVVIAATI
ALHNIPEGMAIAVPIYFATKSRMRAFSYSFLSGLAEPVGAIIGYALLKPFLSPLVFGIVLASVAGIMVYISLDELLPAAE
EYGEHHIAISGLIIGMAVMAASLLLLV

Specific function: Mediates zinc uptake. May also transport other divalent cations [H]

COG id: COG0428

COG function: function code P; Predicted divalent heavy-metal cations transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily [H]

Homologues:

Organism=Homo sapiens, GI229577422, Length=323, Percent_Identity=26.0061919504644, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI229577418, Length=138, Percent_Identity=36.9565217391304, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1789419, Length=256, Percent_Identity=37.890625, Blast_Score=148, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI17507805, Length=316, Percent_Identity=28.4810126582279, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24652846, Length=137, Percent_Identity=35.036496350365, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003689 [H]

Pfam domain/function: PF02535 Zip [H]

EC number: NA

Molecular weight: Translated: 28477; Mature: 28477

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNYYPALGLTLLAGLSTGIGSLLALMVNHTNKKFLTFALGFSAGIMLYVSFVEIMPQS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCC
GNTILQQFPAGNAAWVTTTAFFGGIFFIWLIDQLVPDFENPHEVSMIGTMNAEPSEDARL
CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHH
HRMGIFTAAAIAIHNFPEGLAVFFSALSNQDLGVVIAATIALHNIPEGMAIAVPIYFATK
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHHH
SRMRAFSYSFLSGLAEPVGAIIGYALLKPFLSPLVFGIVLASVAGIMVYISLDELLPAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHCCHHH
EYGEHHIAISGLIIGMAVMAASLLLLV
HHCCCEEHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNSNYYPALGLTLLAGLSTGIGSLLALMVNHTNKKFLTFALGFSAGIMLYVSFVEIMPQS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCC
GNTILQQFPAGNAAWVTTTAFFGGIFFIWLIDQLVPDFENPHEVSMIGTMNAEPSEDARL
CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHH
HRMGIFTAAAIAIHNFPEGLAVFFSALSNQDLGVVIAATIALHNIPEGMAIAVPIYFATK
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHHH
SRMRAFSYSFLSGLAEPVGAIIGYALLKPFLSPLVFGIVLASVAGIMVYISLDELLPAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHCCHHH
EYGEHHIAISGLIIGMAVMAASLLLLV
HHCCCEEHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA