Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is zupT [H]
Identifier: 119357264
GI number: 119357264
Start: 1658115
End: 1658918
Strand: Direct
Name: zupT [H]
Synonym: Cpha266_1456
Alternate gene names: 119357264
Gene position: 1658115-1658918 (Clockwise)
Preceding gene: 119357263
Following gene: 119357268
Centisome position: 52.91
GC content: 49.13
Gene sequence:
>804_bases ATGAACAGTAACTATTATCCCGCTCTTGGTTTGACTCTCCTTGCGGGCCTTTCGACAGGTATCGGCAGTCTGCTTGCTTT GATGGTAAACCATACCAACAAGAAGTTTCTGACTTTTGCACTGGGTTTTTCAGCCGGCATTATGCTTTACGTCTCTTTTG TGGAGATCATGCCGCAGTCAGGTAATACGATTTTACAGCAGTTTCCTGCCGGTAATGCCGCATGGGTTACCACGACAGCT TTTTTTGGCGGTATTTTTTTTATCTGGCTGATCGACCAGCTTGTACCTGATTTTGAAAACCCGCATGAAGTATCCATGAT CGGCACCATGAATGCCGAACCGTCAGAGGACGCTCGTCTCCACCGGATGGGCATTTTTACCGCTGCCGCCATTGCTATCC ATAATTTTCCCGAAGGGCTGGCCGTATTCTTCAGCGCCTTGTCAAACCAGGATCTCGGCGTTGTGATTGCCGCCACCATA GCACTGCATAACATACCGGAAGGAATGGCTATTGCTGTACCGATCTATTTTGCCACAAAAAGCCGAATGAGAGCCTTCAG CTACTCGTTTCTTTCCGGTCTTGCCGAACCTGTCGGAGCAATTATCGGCTACGCGCTTTTAAAGCCTTTTCTCAGTCCGC TTGTGTTCGGCATCGTACTTGCTTCCGTGGCTGGCATCATGGTCTATATTTCGCTTGACGAGCTGCTACCTGCTGCCGAG GAGTACGGCGAGCACCACATTGCAATTTCAGGACTGATTATCGGAATGGCAGTTATGGCTGCAAGTCTTCTTCTGCTTGT CTGA
Upstream 100 bases:
>100_bases CTGTCATCCCGACCTCAGGGAGGGATCTCTCCTTGATCATGGATTTTTGATGGTTGGGAAAAAGTAAACCCGCAGCCATT AATTATAACGCAATGCTTTT
Downstream 100 bases:
>100_bases AAAAAGGTTGTCGAGCGATTCAAAGCCTTTTCCATAAACAACAAAACCGATGGATGATTCAATTATCCCGTCGGTTTTGT TGTCTGTTCCTGCCATCCGC
Product: zinc transporter ZupT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNSNYYPALGLTLLAGLSTGIGSLLALMVNHTNKKFLTFALGFSAGIMLYVSFVEIMPQSGNTILQQFPAGNAAWVTTTA FFGGIFFIWLIDQLVPDFENPHEVSMIGTMNAEPSEDARLHRMGIFTAAAIAIHNFPEGLAVFFSALSNQDLGVVIAATI ALHNIPEGMAIAVPIYFATKSRMRAFSYSFLSGLAEPVGAIIGYALLKPFLSPLVFGIVLASVAGIMVYISLDELLPAAE EYGEHHIAISGLIIGMAVMAASLLLLV
Sequences:
>Translated_267_residues MNSNYYPALGLTLLAGLSTGIGSLLALMVNHTNKKFLTFALGFSAGIMLYVSFVEIMPQSGNTILQQFPAGNAAWVTTTA FFGGIFFIWLIDQLVPDFENPHEVSMIGTMNAEPSEDARLHRMGIFTAAAIAIHNFPEGLAVFFSALSNQDLGVVIAATI ALHNIPEGMAIAVPIYFATKSRMRAFSYSFLSGLAEPVGAIIGYALLKPFLSPLVFGIVLASVAGIMVYISLDELLPAAE EYGEHHIAISGLIIGMAVMAASLLLLV >Mature_267_residues MNSNYYPALGLTLLAGLSTGIGSLLALMVNHTNKKFLTFALGFSAGIMLYVSFVEIMPQSGNTILQQFPAGNAAWVTTTA FFGGIFFIWLIDQLVPDFENPHEVSMIGTMNAEPSEDARLHRMGIFTAAAIAIHNFPEGLAVFFSALSNQDLGVVIAATI ALHNIPEGMAIAVPIYFATKSRMRAFSYSFLSGLAEPVGAIIGYALLKPFLSPLVFGIVLASVAGIMVYISLDELLPAAE EYGEHHIAISGLIIGMAVMAASLLLLV
Specific function: Mediates zinc uptake. May also transport other divalent cations [H]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily [H]
Homologues:
Organism=Homo sapiens, GI229577422, Length=323, Percent_Identity=26.0061919504644, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI229577418, Length=138, Percent_Identity=36.9565217391304, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1789419, Length=256, Percent_Identity=37.890625, Blast_Score=148, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17507805, Length=316, Percent_Identity=28.4810126582279, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24652846, Length=137, Percent_Identity=35.036496350365, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 28477; Mature: 28477
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSNYYPALGLTLLAGLSTGIGSLLALMVNHTNKKFLTFALGFSAGIMLYVSFVEIMPQS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCC GNTILQQFPAGNAAWVTTTAFFGGIFFIWLIDQLVPDFENPHEVSMIGTMNAEPSEDARL CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHH HRMGIFTAAAIAIHNFPEGLAVFFSALSNQDLGVVIAATIALHNIPEGMAIAVPIYFATK HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHHH SRMRAFSYSFLSGLAEPVGAIIGYALLKPFLSPLVFGIVLASVAGIMVYISLDELLPAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHCCHHH EYGEHHIAISGLIIGMAVMAASLLLLV HHCCCEEHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNSNYYPALGLTLLAGLSTGIGSLLALMVNHTNKKFLTFALGFSAGIMLYVSFVEIMPQS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCC GNTILQQFPAGNAAWVTTTAFFGGIFFIWLIDQLVPDFENPHEVSMIGTMNAEPSEDARL CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHH HRMGIFTAAAIAIHNFPEGLAVFFSALSNQDLGVVIAATIALHNIPEGMAIAVPIYFATK HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHHH SRMRAFSYSFLSGLAEPVGAIIGYALLKPFLSPLVFGIVLASVAGIMVYISLDELLPAAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHCCHHH EYGEHHIAISGLIIGMAVMAASLLLLV HHCCCEEHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA