Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357262
Identifier: 119357262
GI number: 119357262
Start: 1656978
End: 1657526
Strand: Direct
Name: 119357262
Synonym: Cpha266_1454
Alternate gene names: NA
Gene position: 1656978-1657526 (Clockwise)
Preceding gene: 119357261
Following gene: 119357263
Centisome position: 52.87
GC content: 49.18
Gene sequence:
>549_bases ATGATCAAAAACGTTACCGTTTACTGCAGCTCGAGCAACCATGCTCCGAAAGGGTATTTTGACGATGCAGCCAAAATCGG CAGCGGACTTGCTGATCGGGGTATAGGACTGGTTTTCGGTGGCGGGCATGTGGGTCTTATGGGGTGCATTGCCGATGCGG TGATGAAAAAAGGTGGATCCGTGCGCGGCATCATCCCCCGTTTTCTTGAGGAAAAAGAGGTTGCTCATTATGGAATTTCA GAACTGCACGTGGTGCAAACCATGCATGAAAGAAAAATGAAACTTACCGACTGGGCGGACGCTTTCATCATTCTTCCAGG GGGATTCGGCACTCTCGACGAGCTCATGGAAATCATAACATGGAAGCACCTCGGTCAACATCAGAAACCCATTATCCTCC TTAATACTGCAGGATTCTGGAACCCGCTCATCTCATTTTTCGACCGTATTGCCGATGACCGCATGGTTAAAGCAGATTAT GCGAACTACTATTCCGTCTGCGAAACGCCCTCCGAGGTTTTGGCTGCGATTGATTGCGCCGATCAATAA
Upstream 100 bases:
>100_bases GAAAGCCTCTTTACGCTTCAAAAAATCGAGGAGCCAAAAACCTATCTCTACACTCGCGCCGATGACAGCATAACAAAAAA TATCCAGCCCTGAATATCTT
Downstream 100 bases:
>100_bases CTCGCCCTGCAAATACCCGGTACAAGGAACCCTCTGACATCGAATCAGGTTGATACTTCCATAACTGACTTAAAGAACCC GTCAGCCAGAAAAGAGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MIKNVTVYCSSSNHAPKGYFDDAAKIGSGLADRGIGLVFGGGHVGLMGCIADAVMKKGGSVRGIIPRFLEEKEVAHYGIS ELHVVQTMHERKMKLTDWADAFIILPGGFGTLDELMEIITWKHLGQHQKPIILLNTAGFWNPLISFFDRIADDRMVKADY ANYYSVCETPSEVLAAIDCADQ
Sequences:
>Translated_182_residues MIKNVTVYCSSSNHAPKGYFDDAAKIGSGLADRGIGLVFGGGHVGLMGCIADAVMKKGGSVRGIIPRFLEEKEVAHYGIS ELHVVQTMHERKMKLTDWADAFIILPGGFGTLDELMEIITWKHLGQHQKPIILLNTAGFWNPLISFFDRIADDRMVKADY ANYYSVCETPSEVLAAIDCADQ >Mature_182_residues MIKNVTVYCSSSNHAPKGYFDDAAKIGSGLADRGIGLVFGGGHVGLMGCIADAVMKKGGSVRGIIPRFLEEKEVAHYGIS ELHVVQTMHERKMKLTDWADAFIILPGGFGTLDELMEIITWKHLGQHQKPIILLNTAGFWNPLISFFDRIADDRMVKADY ANYYSVCETPSEVLAAIDCADQ
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LOG family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322406, Length=202, Percent_Identity=37.1287128712871, Blast_Score=124, Evalue=9e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005269 [H]
Pfam domain/function: PF03641 Lysine_decarbox [H]
EC number: NA
Molecular weight: Translated: 19992; Mature: 19992
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNVTVYCSSSNHAPKGYFDDAAKIGSGLADRGIGLVFGGGHVGLMGCIADAVMKKGGS CCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCC VRGIIPRFLEEKEVAHYGISELHVVQTMHERKMKLTDWADAFIILPGGFGTLDELMEIIT CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHH WKHLGQHQKPIILLNTAGFWNPLISFFDRIADDRMVKADYANYYSVCETPSEVLAAIDCA HHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCHHHHHHHHHCC DQ CC >Mature Secondary Structure MIKNVTVYCSSSNHAPKGYFDDAAKIGSGLADRGIGLVFGGGHVGLMGCIADAVMKKGGS CCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCC VRGIIPRFLEEKEVAHYGISELHVVQTMHERKMKLTDWADAFIILPGGFGTLDELMEIIT CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHH WKHLGQHQKPIILLNTAGFWNPLISFFDRIADDRMVKADYANYYSVCETPSEVLAAIDCA HHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCHHHHHHHHHCC DQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 2116366 [H]