Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357232
Identifier: 119357232
GI number: 119357232
Start: 1616730
End: 1617488
Strand: Direct
Name: 119357232
Synonym: Cpha266_1424
Alternate gene names: NA
Gene position: 1616730-1617488 (Clockwise)
Preceding gene: 119357226
Following gene: 119357234
Centisome position: 51.59
GC content: 56.79
Gene sequence:
>759_bases ATGAACAGTACAGCCATCCAAACCTGCCGATCCTTCCTCAAGGACACCATCCGCCAGACCATCGACTTCTCCCGGACCGA TCAGAACCTCTGGATCCCGCCGCCTCCCGTCGAAAAACCTTACTCGCAGGATATGAAGCGTATAGAGCTGCCAAAAATCG AAACGCTGCAAACTATCGGACAGATCGACCTCAAAACCGCAATCGCAAGACGGGAAAGCTGCCGAACCTACAGCAAAACC CCACTCACCCTCGAAGAACTGTCACTCCTCCTTTGGGCCACTCAGGGAGTCAGACGCAAACTCGATGCAGGCCACGCGCT CAGAACCGTCCCCTCCGCCGGATGCCGCCACGCCTTCGAAACCTATCTCTGCGTTCTGAACGTCATCGGACTTGAAAAAG GCATCTACCGCTACCTCCCCCTTGAACACCAGCTTCTCTTCGAATTCGACGCGGATAACCTTGAACACAAGATCACCAGA GCAGCCCTCGGCCAACCATTCACCGGAGAGGCTGCCGTCACCTTCATCTGGACTGCCATCCCCTACCGGATGGAATGGCG TTACGGACTCGCTGCACACAAGGTCATCGCCCTCGATGCAGGGCACGTCTGCCAGAACCTCTACCTCGCCGCCGAAGCCA TCGGTGCAGGAACCTGTGCAATAGCCGCTTACGACCAGGCCGCGATGGACAAGCTGCTGAACATCGACGGAGAAGAAGAG TTCACGATCTACCTCGCCCCCGTCGGAAAAAAGCGGTAA
Upstream 100 bases:
>100_bases CACGATCCTGACCGACAATCAAGGGAACCTTTGCAATGCCAGCGGAGTACTATTACTCAACGAGAGATCAATAATGACGA AAACAAACTAACTCCGACCC
Downstream 100 bases:
>100_bases CAATGTCAGAGATCCGTCGAAATGTAGCCGGTTTTTCATCCGATTGAACGTCGCCAGCCAGCATCCCGAATCAGAAAACC GCCCCTGAGAAAAACCGGTA
Product: nitroreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MNSTAIQTCRSFLKDTIRQTIDFSRTDQNLWIPPPPVEKPYSQDMKRIELPKIETLQTIGQIDLKTAIARRESCRTYSKT PLTLEELSLLLWATQGVRRKLDAGHALRTVPSAGCRHAFETYLCVLNVIGLEKGIYRYLPLEHQLLFEFDADNLEHKITR AALGQPFTGEAAVTFIWTAIPYRMEWRYGLAAHKVIALDAGHVCQNLYLAAEAIGAGTCAIAAYDQAAMDKLLNIDGEEE FTIYLAPVGKKR
Sequences:
>Translated_252_residues MNSTAIQTCRSFLKDTIRQTIDFSRTDQNLWIPPPPVEKPYSQDMKRIELPKIETLQTIGQIDLKTAIARRESCRTYSKT PLTLEELSLLLWATQGVRRKLDAGHALRTVPSAGCRHAFETYLCVLNVIGLEKGIYRYLPLEHQLLFEFDADNLEHKITR AALGQPFTGEAAVTFIWTAIPYRMEWRYGLAAHKVIALDAGHVCQNLYLAAEAIGAGTCAIAAYDQAAMDKLLNIDGEEE FTIYLAPVGKKR >Mature_252_residues MNSTAIQTCRSFLKDTIRQTIDFSRTDQNLWIPPPPVEKPYSQDMKRIELPKIETLQTIGQIDLKTAIARRESCRTYSKT PLTLEELSLLLWATQGVRRKLDAGHALRTVPSAGCRHAFETYLCVLNVIGLEKGIYRYLPLEHQLLFEFDADNLEHKITR AALGQPFTGEAAVTFIWTAIPYRMEWRYGLAAHKVIALDAGHVCQNLYLAAEAIGAGTCAIAAYDQAAMDKLLNIDGEEE FTIYLAPVGKKR
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 - InterPro: IPR020051 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 28371; Mature: 28371
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTAIQTCRSFLKDTIRQTIDFSRTDQNLWIPPPPVEKPYSQDMKRIELPKIETLQTIG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHH QIDLKTAIARRESCRTYSKTPLTLEELSLLLWATQGVRRKLDAGHALRTVPSAGCRHAFE HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHH TYLCVLNVIGLEKGIYRYLPLEHQLLFEFDADNLEHKITRAALGQPFTGEAAVTFIWTAI HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHEEEEEECC PYRMEWRYGLAAHKVIALDAGHVCQNLYLAAEAIGAGTCAIAAYDQAAMDKLLNIDGEEE CEEEEECCCHHHHEEEEECHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCE FTIYLAPVGKKR EEEEEECCCCCC >Mature Secondary Structure MNSTAIQTCRSFLKDTIRQTIDFSRTDQNLWIPPPPVEKPYSQDMKRIELPKIETLQTIG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHH QIDLKTAIARRESCRTYSKTPLTLEELSLLLWATQGVRRKLDAGHALRTVPSAGCRHAFE HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHH TYLCVLNVIGLEKGIYRYLPLEHQLLFEFDADNLEHKITRAALGQPFTGEAAVTFIWTAI HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCHHEEEEEECC PYRMEWRYGLAAHKVIALDAGHVCQNLYLAAEAIGAGTCAIAAYDQAAMDKLLNIDGEEE CEEEEECCCHHHHEEEEECHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCE FTIYLAPVGKKR EEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]