Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357234
Identifier: 119357234
GI number: 119357234
Start: 1620313
End: 1620642
Strand: Direct
Name: 119357234
Synonym: Cpha266_1426
Alternate gene names: NA
Gene position: 1620313-1620642 (Clockwise)
Preceding gene: 119357232
Following gene: 119357248
Centisome position: 51.7
GC content: 45.45
Gene sequence:
>330_bases ATGACTGATTATTCAGATATCGTAAGTTCTGTCAAGAAAAGTGCTGCAAAAAGGATAATCTATCTCCCGCATGCTGTCCG GCAAATGTCCAGGCCAGACAGGATCATTTTGGTTGCGGAGGTCAGAAATGTGGTTGAGCGCGGGGAATTGGTCGAGGATT ACCCTGAAGATGTGCGTGGACATAGTTGCCTTCTTCTGGGTTATAAGCTTGATGATACACCAATTCATGTGGTTTGCTCA CCAAAGGGGGATTATCTGGCGATTATCACTGCTTATATTCCTAACCCTGAAGAGTGGGAGTGCGATTATAAACGAAGGAG GAGACGATGA
Upstream 100 bases:
>100_bases AGCTGCTCGCATCATGAACGGATATCACAGTGACGGTTACATCGTTATGAAATCCGGCATTAGTGCTCTATGCTCTTGAG ACGCGAATTGAAAGAATCCT
Downstream 100 bases:
>100_bases ACTGCATGTATTGTAAAGGGAATATGGAAAGGGGAATTGCACCCTTCCATATCGATCGGAAAGGCTATCACATCACTTTA GACAGAATCCCTGCATGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MTDYSDIVSSVKKSAAKRIIYLPHAVRQMSRPDRIILVAEVRNVVERGELVEDYPEDVRGHSCLLLGYKLDDTPIHVVCS PKGDYLAIITAYIPNPEEWECDYKRRRRR
Sequences:
>Translated_109_residues MTDYSDIVSSVKKSAAKRIIYLPHAVRQMSRPDRIILVAEVRNVVERGELVEDYPEDVRGHSCLLLGYKLDDTPIHVVCS PKGDYLAIITAYIPNPEEWECDYKRRRRR >Mature_108_residues TDYSDIVSSVKKSAAKRIIYLPHAVRQMSRPDRIILVAEVRNVVERGELVEDYPEDVRGHSCLLLGYKLDDTPIHVVCSP KGDYLAIITAYIPNPEEWECDYKRRRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12660; Mature: 12529
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDYSDIVSSVKKSAAKRIIYLPHAVRQMSRPDRIILVAEVRNVVERGELVEDYPEDVRG CCCHHHHHHHHHHHHHHEEEECCHHHHHCCCCCEEEEHHHHHHHHHHCCHHHCCHHHCCC HSCLLLGYKLDDTPIHVVCSPKGDYLAIITAYIPNPEEWECDYKRRRRR CEEEEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHCCC >Mature Secondary Structure TDYSDIVSSVKKSAAKRIIYLPHAVRQMSRPDRIILVAEVRNVVERGELVEDYPEDVRG CCHHHHHHHHHHHHHHEEEECCHHHHHCCCCCEEEEHHHHHHHHHHCCHHHCCHHHCCC HSCLLLGYKLDDTPIHVVCSPKGDYLAIITAYIPNPEEWECDYKRRRRR CEEEEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA