Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357005
Identifier: 119357005
GI number: 119357005
Start: 1343024
End: 1343899
Strand: Direct
Name: 119357005
Synonym: Cpha266_1189
Alternate gene names: NA
Gene position: 1343024-1343899 (Clockwise)
Preceding gene: 119357004
Following gene: 119357007
Centisome position: 42.85
GC content: 45.55
Gene sequence:
>876_bases GTGAAACAGAGCAGGGATTTTGATGCGAGGCAGGTTGTTGCTTTTCAGAAAAACGAGATTACCGATCACCATATTTACAA AAACCTTTCGGGACGGATAAGCGGTGTGAAAAATCGCAGGATTCTAACCCAGATTGCCGATGATGAAATGAGGCACTACA ATATCTGGAAGAATTACTCTCGAAAGGATGTGGGGCCCAGCAGGTTCAAGATCTGGTTTTACACCATGGTCAGCATGCTG TTCGGGTACACTTTCGGGATCAAATTGATGGAAAAAGGTGAACAGAGTGCTTGTGATCTCTATAACAGTATTCCCGGTTC GTTCAAGGAGATTTCCGGCATAATCCGCGATGAAGAGGAGCATGAGCAGGCACTGGTTACCCTGCTCGATGAAGATCGTC TGAAGTATACCGGTTCAATTGTCCTTGGCCTTAATGATGCGCTTGTTGAGCTGATGGGTGTGCTTGCCGGTCTCTCGTTT GCACTGCAGAATACCACGCTTATTGCGTTGACGGCATCAATTACCGGTTTTGCCGCAGCTCTTTCCATGGCATCATCCGA GTATTTATCAACCAAAGCTGAATCAGGGACGAAAAACCCGTTAAAGGCGGCGTTTTTTACAGGGATTGCCTATCTGCTGA CTGTTGTGGTGCTCATTACGCCCTACCTTTTGTTTTCAGATTATCTGATATGTCTGGGTCTGGCATTTTTTGGAGCGGTC TGCATTATTGGATTTTTCAATTTCTACATAGCCATTGCGCGGAATGTCCCCTTCAAGGAACGTTTTCTTGAAATGGTCGG ACTTTGTTTTACCGTTGCAACACTGAGTTTCGGTGCTGGATATGTCATTCGTTTTGCCTTTGGAATAGACGTATAG
Upstream 100 bases:
>100_bases ACAGGGTTTCTTCAGAGAATGAATGAACTGATCGAGGCTGCAACGATGAGCCGATAATTGAAATGCCGATAACCCAATAA CTTTTTAACCTGGAACCGTT
Downstream 100 bases:
>100_bases GGTCGTTTTTTCAGCGATCCTTCACCGTTTACGGCGTGGTTGAGCCAAGAGTCCTGATGATTTTTTCGTGGTCGACCGGT CCGGATGTATCTACGATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Ferritin CCC1 C Ferritin CCC1 Like C; Transmembrane Protein; Rubrerythrin Subfamily Protein; Rubrerythrin Subfamily
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKQSRDFDARQVVAFQKNEITDHHIYKNLSGRISGVKNRRILTQIADDEMRHYNIWKNYSRKDVGPSRFKIWFYTMVSML FGYTFGIKLMEKGEQSACDLYNSIPGSFKEISGIIRDEEEHEQALVTLLDEDRLKYTGSIVLGLNDALVELMGVLAGLSF ALQNTTLIALTASITGFAAALSMASSEYLSTKAESGTKNPLKAAFFTGIAYLLTVVVLITPYLLFSDYLICLGLAFFGAV CIIGFFNFYIAIARNVPFKERFLEMVGLCFTVATLSFGAGYVIRFAFGIDV
Sequences:
>Translated_291_residues MKQSRDFDARQVVAFQKNEITDHHIYKNLSGRISGVKNRRILTQIADDEMRHYNIWKNYSRKDVGPSRFKIWFYTMVSML FGYTFGIKLMEKGEQSACDLYNSIPGSFKEISGIIRDEEEHEQALVTLLDEDRLKYTGSIVLGLNDALVELMGVLAGLSF ALQNTTLIALTASITGFAAALSMASSEYLSTKAESGTKNPLKAAFFTGIAYLLTVVVLITPYLLFSDYLICLGLAFFGAV CIIGFFNFYIAIARNVPFKERFLEMVGLCFTVATLSFGAGYVIRFAFGIDV >Mature_291_residues MKQSRDFDARQVVAFQKNEITDHHIYKNLSGRISGVKNRRILTQIADDEMRHYNIWKNYSRKDVGPSRFKIWFYTMVSML FGYTFGIKLMEKGEQSACDLYNSIPGSFKEISGIIRDEEEHEQALVTLLDEDRLKYTGSIVLGLNDALVELMGVLAGLSF ALQNTTLIALTASITGFAAALSMASSEYLSTKAESGTKNPLKAAFFTGIAYLLTVVVLITPYLLFSDYLICLGLAFFGAV CIIGFFNFYIAIARNVPFKERFLEMVGLCFTVATLSFGAGYVIRFAFGIDV
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32545; Mature: 32545
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSRDFDARQVVAFQKNEITDHHIYKNLSGRISGVKNRRILTQIADDEMRHYNIWKNYS CCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCC RKDVGPSRFKIWFYTMVSMLFGYTFGIKLMEKGEQSACDLYNSIPGSFKEISGIIRDEEE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCHH HEQALVTLLDEDRLKYTGSIVLGLNDALVELMGVLAGLSFALQNTTLIALTASITGFAAA HHHHHHHHHHCCCHHEECEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHH LSMASSEYLSTKAESGTKNPLKAAFFTGIAYLLTVVVLITPYLLFSDYLICLGLAFFGAV HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CIIGFFNFYIAIARNVPFKERFLEMVGLCFTVATLSFGAGYVIRFAFGIDV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCC >Mature Secondary Structure MKQSRDFDARQVVAFQKNEITDHHIYKNLSGRISGVKNRRILTQIADDEMRHYNIWKNYS CCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCC RKDVGPSRFKIWFYTMVSMLFGYTFGIKLMEKGEQSACDLYNSIPGSFKEISGIIRDEEE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCHH HEQALVTLLDEDRLKYTGSIVLGLNDALVELMGVLAGLSFALQNTTLIALTASITGFAAA HHHHHHHHHHCCCHHEECEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHH LSMASSEYLSTKAESGTKNPLKAAFFTGIAYLLTVVVLITPYLLFSDYLICLGLAFFGAV HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CIIGFFNFYIAIARNVPFKERFLEMVGLCFTVATLSFGAGYVIRFAFGIDV HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA