Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119357005

Identifier: 119357005

GI number: 119357005

Start: 1343024

End: 1343899

Strand: Direct

Name: 119357005

Synonym: Cpha266_1189

Alternate gene names: NA

Gene position: 1343024-1343899 (Clockwise)

Preceding gene: 119357004

Following gene: 119357007

Centisome position: 42.85

GC content: 45.55

Gene sequence:

>876_bases
GTGAAACAGAGCAGGGATTTTGATGCGAGGCAGGTTGTTGCTTTTCAGAAAAACGAGATTACCGATCACCATATTTACAA
AAACCTTTCGGGACGGATAAGCGGTGTGAAAAATCGCAGGATTCTAACCCAGATTGCCGATGATGAAATGAGGCACTACA
ATATCTGGAAGAATTACTCTCGAAAGGATGTGGGGCCCAGCAGGTTCAAGATCTGGTTTTACACCATGGTCAGCATGCTG
TTCGGGTACACTTTCGGGATCAAATTGATGGAAAAAGGTGAACAGAGTGCTTGTGATCTCTATAACAGTATTCCCGGTTC
GTTCAAGGAGATTTCCGGCATAATCCGCGATGAAGAGGAGCATGAGCAGGCACTGGTTACCCTGCTCGATGAAGATCGTC
TGAAGTATACCGGTTCAATTGTCCTTGGCCTTAATGATGCGCTTGTTGAGCTGATGGGTGTGCTTGCCGGTCTCTCGTTT
GCACTGCAGAATACCACGCTTATTGCGTTGACGGCATCAATTACCGGTTTTGCCGCAGCTCTTTCCATGGCATCATCCGA
GTATTTATCAACCAAAGCTGAATCAGGGACGAAAAACCCGTTAAAGGCGGCGTTTTTTACAGGGATTGCCTATCTGCTGA
CTGTTGTGGTGCTCATTACGCCCTACCTTTTGTTTTCAGATTATCTGATATGTCTGGGTCTGGCATTTTTTGGAGCGGTC
TGCATTATTGGATTTTTCAATTTCTACATAGCCATTGCGCGGAATGTCCCCTTCAAGGAACGTTTTCTTGAAATGGTCGG
ACTTTGTTTTACCGTTGCAACACTGAGTTTCGGTGCTGGATATGTCATTCGTTTTGCCTTTGGAATAGACGTATAG

Upstream 100 bases:

>100_bases
ACAGGGTTTCTTCAGAGAATGAATGAACTGATCGAGGCTGCAACGATGAGCCGATAATTGAAATGCCGATAACCCAATAA
CTTTTTAACCTGGAACCGTT

Downstream 100 bases:

>100_bases
GGTCGTTTTTTCAGCGATCCTTCACCGTTTACGGCGTGGTTGAGCCAAGAGTCCTGATGATTTTTTCGTGGTCGACCGGT
CCGGATGTATCTACGATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Ferritin CCC1 C Ferritin CCC1 Like C; Transmembrane Protein; Rubrerythrin Subfamily Protein; Rubrerythrin Subfamily

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MKQSRDFDARQVVAFQKNEITDHHIYKNLSGRISGVKNRRILTQIADDEMRHYNIWKNYSRKDVGPSRFKIWFYTMVSML
FGYTFGIKLMEKGEQSACDLYNSIPGSFKEISGIIRDEEEHEQALVTLLDEDRLKYTGSIVLGLNDALVELMGVLAGLSF
ALQNTTLIALTASITGFAAALSMASSEYLSTKAESGTKNPLKAAFFTGIAYLLTVVVLITPYLLFSDYLICLGLAFFGAV
CIIGFFNFYIAIARNVPFKERFLEMVGLCFTVATLSFGAGYVIRFAFGIDV

Sequences:

>Translated_291_residues
MKQSRDFDARQVVAFQKNEITDHHIYKNLSGRISGVKNRRILTQIADDEMRHYNIWKNYSRKDVGPSRFKIWFYTMVSML
FGYTFGIKLMEKGEQSACDLYNSIPGSFKEISGIIRDEEEHEQALVTLLDEDRLKYTGSIVLGLNDALVELMGVLAGLSF
ALQNTTLIALTASITGFAAALSMASSEYLSTKAESGTKNPLKAAFFTGIAYLLTVVVLITPYLLFSDYLICLGLAFFGAV
CIIGFFNFYIAIARNVPFKERFLEMVGLCFTVATLSFGAGYVIRFAFGIDV
>Mature_291_residues
MKQSRDFDARQVVAFQKNEITDHHIYKNLSGRISGVKNRRILTQIADDEMRHYNIWKNYSRKDVGPSRFKIWFYTMVSML
FGYTFGIKLMEKGEQSACDLYNSIPGSFKEISGIIRDEEEHEQALVTLLDEDRLKYTGSIVLGLNDALVELMGVLAGLSF
ALQNTTLIALTASITGFAAALSMASSEYLSTKAESGTKNPLKAAFFTGIAYLLTVVVLITPYLLFSDYLICLGLAFFGAV
CIIGFFNFYIAIARNVPFKERFLEMVGLCFTVATLSFGAGYVIRFAFGIDV

Specific function: Unknown

COG id: COG1814

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32545; Mature: 32545

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSRDFDARQVVAFQKNEITDHHIYKNLSGRISGVKNRRILTQIADDEMRHYNIWKNYS
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
RKDVGPSRFKIWFYTMVSMLFGYTFGIKLMEKGEQSACDLYNSIPGSFKEISGIIRDEEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCHH
HEQALVTLLDEDRLKYTGSIVLGLNDALVELMGVLAGLSFALQNTTLIALTASITGFAAA
HHHHHHHHHHCCCHHEECEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHH
LSMASSEYLSTKAESGTKNPLKAAFFTGIAYLLTVVVLITPYLLFSDYLICLGLAFFGAV
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CIIGFFNFYIAIARNVPFKERFLEMVGLCFTVATLSFGAGYVIRFAFGIDV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCC
>Mature Secondary Structure
MKQSRDFDARQVVAFQKNEITDHHIYKNLSGRISGVKNRRILTQIADDEMRHYNIWKNYS
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
RKDVGPSRFKIWFYTMVSMLFGYTFGIKLMEKGEQSACDLYNSIPGSFKEISGIIRDEEE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHCCCHH
HEQALVTLLDEDRLKYTGSIVLGLNDALVELMGVLAGLSFALQNTTLIALTASITGFAAA
HHHHHHHHHHCCCHHEECEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHH
LSMASSEYLSTKAESGTKNPLKAAFFTGIAYLLTVVVLITPYLLFSDYLICLGLAFFGAV
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CIIGFFNFYIAIARNVPFKERFLEMVGLCFTVATLSFGAGYVIRFAFGIDV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA