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The map label for this gene is pds [H]

Identifier: 119356990

GI number: 119356990

Start: 1322177

End: 1323562

Strand: Direct

Name: pds [H]

Synonym: Cpha266_1173

Alternate gene names: 119356990

Gene position: 1322177-1323562 (Clockwise)

Preceding gene: 119356989

Following gene: 119356995

Centisome position: 42.19

GC content: 48.41

Gene sequence:

>1386_bases
ATGAGTACACATAACAAAACAGCTCTGATTCTCGGGGGCGGACTTGCAGGTCTTACTGCAGCAAAGCGTTTGACTGACAG
GGGTTTTCAGGTCAGGGTTCTTGAGAAAAGGGAGATTTTCGGTGGAAAGGTGTCGTCATGGAAAGATGAAGAGGGCGACT
GGATTGAGTCGGGAACTCACTGTTTTTTCGGCGCCTATTCGGTTCTCTATGATCTCATGAAGGAGATCGATACCTATCAC
GCAGTGCTCTGGAAAGAGCACAAGCTAACCTATACTCTGGCTGAAGGAGATCGGTTTACGTTTAATACGTGGGATCTTCC
AAGTCCGCTTCACCTTCTTCCGGCCATTTTGAAAAATGGCTATTTTTCTTTTGGCGAGATGGCTTCTTTTTCGAAATCGC
TGATTCCGCTGGCCCTGCAGCAGCAGCAATATCCTCCTTCTCAGGATCATCTTACCTTTGCAGAATGGGCTGAAGAGAAA
AAGTTCGGGCATCGTCTGATGCAGAAAATGTTCAGACCGATGGCGCTTGCGCTGAAATTTATTCCCCCGGAGGAGATCTC
GGCCAAAATCATTCTCGATGTTACCGAAACCTTTTACCGCCTTCCGAACGCATCTCGGATGGGCTTTCTCAAAGGTTCGC
CCCAGGAATATCTTCATCAACCCCTTCTTGATTATGCAACTGCAAAAGGGGCCGTCTTCAAAAACAAGACGGCAATAGAA
GAGCTTTTGTATGACGGCGGTGAAATCAGGGGCGTTCATCTTCGTAATGGCGAGATACTTACGGCTGATTACTACCTGTC
GGCACTGCCGATCAATGATCTGAACAAGGTATTGCCCGAGGAGCTTAAAAAGCATGATCGATTTTTCTCGGTGCTTGGCA
ATCTTGAAGGCGTTCCTGTTATTTCTGTACAGATATGGTATGACAAAGAGATTACGCCCGTTGATAATGTGCTTTTCAGC
CCTGATGGCATTATTCCGGTCTATGCCAATCTGGCAAAAACGACGCCTGAGTACCAGACACTCAGGGGTGAGCCGTTCAG
CGGAAAAACACGTTTTGAGTTCTGTGTCGCGCCGGCACGAAATCTTATGGGCCTGACGAAAGAGGAGATTATTCACCAGG
TCGATCTCAGCGTCAGAAACTGTTATCCGAAATCGTCGGCTGGTGCAAGGATATTGAAAGCAACCGTCGTGAAGATTCCG
CACTCCGTCTATGCGCCGTTGCCCAATATGGAGCAGTATCGGCCAACGCAAAGAACGCCTGTGCGCAACCTGTTTCTGGC
TGGCGGGTTTACCCGGCAGCTTTATTATGATTCAATGGGTGGTGCGGTCATGAGCGCAAATCTTGCCGTAGAGGGTATTC
TGAAAGCATCGGGAGTTATGGATTAA

Upstream 100 bases:

>100_bases
GCAACGCTTTCCCGCGCGATGGAAGGCCGGTCGGCCATGTAGCACCTTGAACGATATGGATGAACGACACAAAGAAAATT
CAATTCCGTAAGTAATTGCC

Downstream 100 bases:

>100_bases
CGAGTGTTCTGTTTTTTCTTTCGATCGGTCGGGCGCTGAGGATTTCAGTCATACTCAGAGCGAAGCAGTCAGCGTACCAT
GGAAGGGGAGTGCCTGCGAA

Product: zeta-carotene desaturase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MSTHNKTALILGGGLAGLTAAKRLTDRGFQVRVLEKREIFGGKVSSWKDEEGDWIESGTHCFFGAYSVLYDLMKEIDTYH
AVLWKEHKLTYTLAEGDRFTFNTWDLPSPLHLLPAILKNGYFSFGEMASFSKSLIPLALQQQQYPPSQDHLTFAEWAEEK
KFGHRLMQKMFRPMALALKFIPPEEISAKIILDVTETFYRLPNASRMGFLKGSPQEYLHQPLLDYATAKGAVFKNKTAIE
ELLYDGGEIRGVHLRNGEILTADYYLSALPINDLNKVLPEELKKHDRFFSVLGNLEGVPVISVQIWYDKEITPVDNVLFS
PDGIIPVYANLAKTTPEYQTLRGEPFSGKTRFEFCVAPARNLMGLTKEEIIHQVDLSVRNCYPKSSAGARILKATVVKIP
HSVYAPLPNMEQYRPTQRTPVRNLFLAGGFTRQLYYDSMGGAVMSANLAVEGILKASGVMD

Sequences:

>Translated_461_residues
MSTHNKTALILGGGLAGLTAAKRLTDRGFQVRVLEKREIFGGKVSSWKDEEGDWIESGTHCFFGAYSVLYDLMKEIDTYH
AVLWKEHKLTYTLAEGDRFTFNTWDLPSPLHLLPAILKNGYFSFGEMASFSKSLIPLALQQQQYPPSQDHLTFAEWAEEK
KFGHRLMQKMFRPMALALKFIPPEEISAKIILDVTETFYRLPNASRMGFLKGSPQEYLHQPLLDYATAKGAVFKNKTAIE
ELLYDGGEIRGVHLRNGEILTADYYLSALPINDLNKVLPEELKKHDRFFSVLGNLEGVPVISVQIWYDKEITPVDNVLFS
PDGIIPVYANLAKTTPEYQTLRGEPFSGKTRFEFCVAPARNLMGLTKEEIIHQVDLSVRNCYPKSSAGARILKATVVKIP
HSVYAPLPNMEQYRPTQRTPVRNLFLAGGFTRQLYYDSMGGAVMSANLAVEGILKASGVMD
>Mature_460_residues
STHNKTALILGGGLAGLTAAKRLTDRGFQVRVLEKREIFGGKVSSWKDEEGDWIESGTHCFFGAYSVLYDLMKEIDTYHA
VLWKEHKLTYTLAEGDRFTFNTWDLPSPLHLLPAILKNGYFSFGEMASFSKSLIPLALQQQQYPPSQDHLTFAEWAEEKK
FGHRLMQKMFRPMALALKFIPPEEISAKIILDVTETFYRLPNASRMGFLKGSPQEYLHQPLLDYATAKGAVFKNKTAIEE
LLYDGGEIRGVHLRNGEILTADYYLSALPINDLNKVLPEELKKHDRFFSVLGNLEGVPVISVQIWYDKEITPVDNVLFSP
DGIIPVYANLAKTTPEYQTLRGEPFSGKTRFEFCVAPARNLMGLTKEEIIHQVDLSVRNCYPKSSAGARILKATVVKIPH
SVYAPLPNMEQYRPTQRTPVRNLFLAGGFTRQLYYDSMGGAVMSANLAVEGILKASGVMD

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG3349

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001613
- InterPro:   IPR002937
- InterPro:   IPR014102 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 51871; Mature: 51740

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTHNKTALILGGGLAGLTAAKRLTDRGFQVRVLEKREIFGGKVSSWKDEEGDWIESGTH
CCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCCCCHHHCCCC
CFFGAYSVLYDLMKEIDTYHAVLWKEHKLTYTLAEGDRFTFNTWDLPSPLHLLPAILKNG
HHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHCC
YFSFGEMASFSKSLIPLALQQQQYPPSQDHLTFAEWAEEKKFGHRLMQKMFRPMALALKF
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IPPEEISAKIILDVTETFYRLPNASRMGFLKGSPQEYLHQPLLDYATAKGAVFKNKTAIE
CCCHHCCEEEEEEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCHHHHH
ELLYDGGEIRGVHLRNGEILTADYYLSALPINDLNKVLPEELKKHDRFFSVLGNLEGVPV
HHHHCCCCEEEEEECCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
ISVQIWYDKEITPVDNVLFSPDGIIPVYANLAKTTPEYQTLRGEPFSGKTRFEFCVAPAR
EEEEEEECCCCCCHHHEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEECCHH
NLMGLTKEEIIHQVDLSVRNCYPKSSAGARILKATVVKIPHSVYAPLPNMEQYRPTQRTP
HHHCCCHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHCCHHHHCCCCCHHHCCCCCCCC
VRNLFLAGGFTRQLYYDSMGGAVMSANLAVEGILKASGVMD
HHHEEECCCCCHHHHHHCCCCEEEECCHHHHHHHHHCCCCC
>Mature Secondary Structure 
STHNKTALILGGGLAGLTAAKRLTDRGFQVRVLEKREIFGGKVSSWKDEEGDWIESGTH
CCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCCCCHHHCCCC
CFFGAYSVLYDLMKEIDTYHAVLWKEHKLTYTLAEGDRFTFNTWDLPSPLHLLPAILKNG
HHHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHCC
YFSFGEMASFSKSLIPLALQQQQYPPSQDHLTFAEWAEEKKFGHRLMQKMFRPMALALKF
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IPPEEISAKIILDVTETFYRLPNASRMGFLKGSPQEYLHQPLLDYATAKGAVFKNKTAIE
CCCHHCCEEEEEEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCHHHHH
ELLYDGGEIRGVHLRNGEILTADYYLSALPINDLNKVLPEELKKHDRFFSVLGNLEGVPV
HHHHCCCCEEEEEECCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
ISVQIWYDKEITPVDNVLFSPDGIIPVYANLAKTTPEYQTLRGEPFSGKTRFEFCVAPAR
EEEEEEECCCCCCHHHEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEECCHH
NLMGLTKEEIIHQVDLSVRNCYPKSSAGARILKATVVKIPHSVYAPLPNMEQYRPTQRTP
HHHCCCHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHCCHHHHCCCCCHHHCCCCCCCC
VRNLFLAGGFTRQLYYDSMGGAVMSANLAVEGILKASGVMD
HHHEEECCCCCHHHHHHCCCCEEEECCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1581575; 8905231 [H]