Click here to switch to the map view.

The map label for this gene is hoxZ [H]

Identifier: 119356802

GI number: 119356802

Start: 1117135

End: 1117818

Strand: Direct

Name: hoxZ [H]

Synonym: Cpha266_0974

Alternate gene names: 119356802

Gene position: 1117135-1117818 (Clockwise)

Preceding gene: 119356801

Following gene: 119356803

Centisome position: 35.65

GC content: 46.35

Gene sequence:

>684_bases
ATGGGTAGAATTATTGAAGAAATCTATGTCTGGAGATTGCCTGTAAGGTTCTATCATTGGGTGAATGCCCTCTGCACGGT
TATTCTTCTTGTTACCGGCATGTATATAGCCGCCCCTCTTGTCAACCCGCCTCTTGGTGAGGCGGTCTGGTACAAGGGAA
TGGCCTGGTGGCGCTACGTCCATTTTTTAACGGCATTTATCTTTATTGCCAATTTTCTTTTCAGAATGTACTGGGCACTG
TTTGGTAATGATAAATATGGACGTTTCGGCGGTTTCAGACCATGGGCGCCATCCTGGTGGGGAACTCCGTTCAAGGAGCA
GGTTCAATCGTATCTTTTTTTGCGTGTTGATGAACCGAACTATGTGGGCCACAATCCTGTTGCAGCCCTTGCCCATTTCA
TTTTTATTTTCTGCGGCTCGCTGTTCATGATTTTTACCGGGCTTGCCATGTATGGTGAAAACAATCCGGGAGGTTTCTGC
GAGACCTTTTTCGGCTGGATGATCCCGATGTTTGGCGGCAGTTTTACCTTGCACTTTGCCCATCATCTTGGATCATGGAT
TTTTCCGATCTACCTTGTCGTGCATCTTTATGCTGTATTTCGTCATGACGTTGTTGACAGAACCAGCGTTACCTCATCGA
TCATAACAGGTTACAAACACAAGGTTGAGGAAGAGCCTGTCTGA

Upstream 100 bases:

>100_bases
TGTACACTCATTCGATCCCTGTCTTGCATGCGCATCCCATGTGGTTGATATGCATGGCAAAGAGATCACCAAGGTCAAAA
TCGTTTAAACGGAGCAGATC

Downstream 100 bases:

>100_bases
TTGACGGCCCCCTGAAAAAAAAGGAAAAGGTAAACATAAAAAGCTCACTGCTGAATGAAGACGGGATGCAGTGAGCTTTT
TATATGGTTTTTGTGAATGC

Product: Ni/Fe-hydrogenase, b-type cytochrome subunit

Products: oxidized ferredoxin; H2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MGRIIEEIYVWRLPVRFYHWVNALCTVILLVTGMYIAAPLVNPPLGEAVWYKGMAWWRYVHFLTAFIFIANFLFRMYWAL
FGNDKYGRFGGFRPWAPSWWGTPFKEQVQSYLFLRVDEPNYVGHNPVAALAHFIFIFCGSLFMIFTGLAMYGENNPGGFC
ETFFGWMIPMFGGSFTLHFAHHLGSWIFPIYLVVHLYAVFRHDVVDRTSVTSSIITGYKHKVEEEPV

Sequences:

>Translated_227_residues
MGRIIEEIYVWRLPVRFYHWVNALCTVILLVTGMYIAAPLVNPPLGEAVWYKGMAWWRYVHFLTAFIFIANFLFRMYWAL
FGNDKYGRFGGFRPWAPSWWGTPFKEQVQSYLFLRVDEPNYVGHNPVAALAHFIFIFCGSLFMIFTGLAMYGENNPGGFC
ETFFGWMIPMFGGSFTLHFAHHLGSWIFPIYLVVHLYAVFRHDVVDRTSVTSSIITGYKHKVEEEPV
>Mature_226_residues
GRIIEEIYVWRLPVRFYHWVNALCTVILLVTGMYIAAPLVNPPLGEAVWYKGMAWWRYVHFLTAFIFIANFLFRMYWALF
GNDKYGRFGGFRPWAPSWWGTPFKEQVQSYLFLRVDEPNYVGHNPVAALAHFIFIFCGSLFMIFTGLAMYGENNPGGFCE
TFFGWMIPMFGGSFTLHFAHHLGSWIFPIYLVVHLYAVFRHDVVDRTSVTSSIITGYKHKVEEEPV

Specific function: Probable b-type cytochrome [H]

COG id: COG1969

COG function: function code C; Ni,Fe-hydrogenase I cytochrome b subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupC/hyaC/hydC family [H]

Homologues:

Organism=Escherichia coli, GI1787208, Length=221, Percent_Identity=36.6515837104072, Blast_Score=125, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174
- InterPro:   IPR000516 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 26468; Mature: 26337

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRIIEEIYVWRLPVRFYHWVNALCTVILLVTGMYIAAPLVNPPLGEAVWYKGMAWWRYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
HFLTAFIFIANFLFRMYWALFGNDKYGRFGGFRPWAPSWWGTPFKEQVQSYLFLRVDEPN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCC
YVGHNPVAALAHFIFIFCGSLFMIFTGLAMYGENNPGGFCETFFGWMIPMFGGSFTLHFA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
HHLGSWIFPIYLVVHLYAVFRHDVVDRTSVTSSIITGYKHKVEEEPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GRIIEEIYVWRLPVRFYHWVNALCTVILLVTGMYIAAPLVNPPLGEAVWYKGMAWWRYV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
HFLTAFIFIANFLFRMYWALFGNDKYGRFGGFRPWAPSWWGTPFKEQVQSYLFLRVDEPN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCC
YVGHNPVAALAHFIFIFCGSLFMIFTGLAMYGENNPGGFCETFFGWMIPMFGGSFTLHFA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHH
HHLGSWIFPIYLVVHLYAVFRHDVVDRTSVTSSIITGYKHKVEEEPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced ferredoxin; 2 H+ [C]

Specific reaction: Reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2 [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488 [H]