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The map label for this gene is hupD [H]

Identifier: 119356803

GI number: 119356803

Start: 1117902

End: 1118405

Strand: Direct

Name: hupD [H]

Synonym: Cpha266_0975

Alternate gene names: 119356803

Gene position: 1117902-1118405 (Clockwise)

Preceding gene: 119356802

Following gene: 119356806

Centisome position: 35.67

GC content: 46.03

Gene sequence:

>504_bases
ATGGTTTTTGTGAATGCTATTGTTTCAATTATGCAGTACAATCGAATCAACATTATAGGGCTTGGCAACATTCTTTTCGG
CGATGAGGGTTTCGGTGTCGCGGTAGTAAACAGTTTTCAGGAAATACCTGATTTGCCTGAATGCGTGCACTGCATTGATG
GCGGAACTCAGGGGCTGGCCCTTCTTGATTACATTGAATCATGCGACGGCGTGATTGTTTTTGACGCGCTTATTCCCATT
GATTATGAAAACAGGGTACATGTCTATCATAAAGATGAACTGCCGGCATTTATCCACCGAAAAATGTCATCCCATCAGAT
GGGGCTCAGCGAACTGATCGGTATTGCAAAGCTGCATGGTAAAATGCCGGAAAAGTTTGTTCTTATCGGCGTTCCGCCGA
AAAATCTTGATCTGGGTATAGGATTGAGTCAGCAGGCAGCTCCGCTTGTTTCGGAGGCAGTCAAGGCCGGCCAGGAGATA
CTTTCCGGGTGGCTTGAAAAGTAG

Upstream 100 bases:

>100_bases
AGGAAGAGCCTGTCTGATTGACGGCCCCCTGAAAAAAAAGGAAAAGGTAAACATAAAAAGCTCACTGCTGAATGAAGACG
GGATGCAGTGAGCTTTTTAT

Downstream 100 bases:

>100_bases
TTACGGATATGTCTGGCTGCTGCGGCCAGAATAAGATGCCGCAGCAGAACATGCGCCATTTCAGGCACCGATAAGACGTA
AAAACTCGCTTCGAGTGGAT

Product: hydrogenase maturation protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MVFVNAIVSIMQYNRINIIGLGNILFGDEGFGVAVVNSFQEIPDLPECVHCIDGGTQGLALLDYIESCDGVIVFDALIPI
DYENRVHVYHKDELPAFIHRKMSSHQMGLSELIGIAKLHGKMPEKFVLIGVPPKNLDLGIGLSQQAAPLVSEAVKAGQEI
LSGWLEK

Sequences:

>Translated_167_residues
MVFVNAIVSIMQYNRINIIGLGNILFGDEGFGVAVVNSFQEIPDLPECVHCIDGGTQGLALLDYIESCDGVIVFDALIPI
DYENRVHVYHKDELPAFIHRKMSSHQMGLSELIGIAKLHGKMPEKFVLIGVPPKNLDLGIGLSQQAAPLVSEAVKAGQEI
LSGWLEK
>Mature_167_residues
MVFVNAIVSIMQYNRINIIGLGNILFGDEGFGVAVVNSFQEIPDLPECVHCIDGGTQGLALLDYIESCDGVIVFDALIPI
DYENRVHVYHKDELPAFIHRKMSSHQMGLSELIGIAKLHGKMPEKFVLIGVPPKNLDLGIGLSQQAAPLVSEAVKAGQEI
LSGWLEK

Specific function: Not known. Could be involved in the processing of hydrogenase [H]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A31 family [H]

Homologues:

Organism=Escherichia coli, GI1787209, Length=131, Percent_Identity=39.6946564885496, Blast_Score=97, Evalue=4e-22,
Organism=Escherichia coli, GI1789367, Length=142, Percent_Identity=33.0985915492958, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004419
- InterPro:   IPR000671 [H]

Pfam domain/function: PF01750 HycI [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 18224; Mature: 18224

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFVNAIVSIMQYNRINIIGLGNILFGDEGFGVAVVNSFQEIPDLPECVHCIDGGTQGLA
CCHHHHHHHHHHCCCEEEEEECCEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHH
LLDYIESCDGVIVFDALIPIDYENRVHVYHKDELPAFIHRKMSSHQMGLSELIGIAKLHG
HHHHHHCCCCEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHC
KMPEKFVLIGVPPKNLDLGIGLSQQAAPLVSEAVKAGQEILSGWLEK
CCCCCEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVFVNAIVSIMQYNRINIIGLGNILFGDEGFGVAVVNSFQEIPDLPECVHCIDGGTQGLA
CCHHHHHHHHHHCCCEEEEEECCEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHH
LLDYIESCDGVIVFDALIPIDYENRVHVYHKDELPAFIHRKMSSHQMGLSELIGIAKLHG
HHHHHHCCCCEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHC
KMPEKFVLIGVPPKNLDLGIGLSQQAAPLVSEAVKAGQEILSGWLEK
CCCCCEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Ni [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8230232; 8163174; 12597275 [H]