| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is dnaC [H]
Identifier: 118578973
GI number: 118578973
Start: 570917
End: 572293
Strand: Direct
Name: dnaC [H]
Synonym: Ppro_0534
Alternate gene names: 118578973
Gene position: 570917-572293 (Clockwise)
Preceding gene: 118578972
Following gene: 118578974
Centisome position: 14.24
GC content: 62.89
Gene sequence:
>1377_bases ATGACCAACCCCGATCTTCGCAAACTCCCCCCCCAGAGCCTGGAGGCTGAAATGTCCGTGCTGGGGGGCATCCTGATCGA TAACGATGCCATCAACCGGGTGCTGGAAATCCTCGGCGCGGAAGACTTCTACCGCGAGAGCCACCGCAAGATCTTCCAGG CCATGATGCGCCTCTCGGACCAGCGCGAGCCGTGCGACCTGATCACCATGACCGACATGCTCAAGAAGCAGGGTGAACTG GAGGAGGTGGGGGGCGCCCCCTACCTGTTGACCCTGGTGGACTACGTTCCCACCGCGGCCAACATCGCCTACTACTGCAA GATCGTGAAGGAAAAGGCGGTCAACCGTAAGCTGATCAGCGTGGCCACCGAGATCGTGACCCGGGGGTACGACGAGCAGG CCGATATCAACGAACTGCTGGATCTGGCCCAGAAGAACATCTACGAGATCTCCGAGAACAAGCTGCGCCCCCAGTACGTG CCGGTGCAGGCGGTGCTCAAGGAAGCCTTCACCATCCTGAAGACCCTGCACGACCGCAAGGAGCATGTCACCGGCGTGCC CACCGGTTATGTGGACCTGGACCACATGACCGCCGGCTTCCAGCCCGGCGACCTGATTATCGTGGCCGCGCGCCCCTCCA TGGGCAAGACCACCCTGGCGCTGAACGTGGCCGAATACGCTAGCGCCGATCCCCACAACAAGAAGAAGGTCCCCTCGGTG ATCTTCTCCCTGGAGATGGGCAAGGAACAGCTGGTGATGCGTTTTTTGGCCTCCATCGCCAAGGTGGACTTCGGCAGGAT GCGCACCGGCCACTTCCTGGATTCGGACTGGCCCCGCCTCACCAGGGCGGCCGGCATCCTGCACGACGCCAAGATATTCA TCGACGACACGCCGGCCATCTCGGTGCTGGAGCTGCGCTCCAAGGCGCGGCGCCTGAAGAGCGAGCACGACATCGGCCTG ATCATCATCGACTACCTGCAGCTGATGCGGGGGGGCGCCAACCCGGAATCCCGCCAGCAGGAGATCTCGGAGATCTCCCG CTCCCTGAAGGCGCTGGCCAAGGAGCTGAACGTGCCGGTGATCGCCCTGTCCCAGCTCAACCGCGAACTGGAAAAGCGCG CCGACAAGCGCCCCATGATGAGCGACCTGCGCGAGTCGGGCGCCATCGAACAGGATGCCGACGTGATCATGTTCGTCTAC CGCGAATCGGTGTACTGCGAGCAGTGCCGCAAGCGGGACGGCACCTGCACCCAGAACCACGAACGCAACTCCGAGATCAT CATCGGCAAGCAGCGTAACGGCGCCATCGGCACCGTCAACCTGGCCTTCTTCGGAGAGCACACCCGCTTCGAGAACCTGA GCGCCCGGGAAGGCTGA
Upstream 100 bases:
>100_bases TCCCGCGCAGCTTCCCGGATCAAGGCCCTGCCCCTGATCCGGTCGGGCCCGTAGGGAAGATTACCCGCACTTCAATGTTT TCCGGAGAAGAAATACCCCC
Downstream 100 bases:
>100_bases GGCGCCCCGGCGGTTCCCGCGGTGAGGGAGTTTTGGCGTAGTGCCAAGGCACATTCTATGGTATGAACATCCAGTTACGG GAGAGGAACCATGACCGAGT
Product: replicative DNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MTNPDLRKLPPQSLEAEMSVLGGILIDNDAINRVLEILGAEDFYRESHRKIFQAMMRLSDQREPCDLITMTDMLKKQGEL EEVGGAPYLLTLVDYVPTAANIAYYCKIVKEKAVNRKLISVATEIVTRGYDEQADINELLDLAQKNIYEISENKLRPQYV PVQAVLKEAFTILKTLHDRKEHVTGVPTGYVDLDHMTAGFQPGDLIIVAARPSMGKTTLALNVAEYASADPHNKKKVPSV IFSLEMGKEQLVMRFLASIAKVDFGRMRTGHFLDSDWPRLTRAAGILHDAKIFIDDTPAISVLELRSKARRLKSEHDIGL IIIDYLQLMRGGANPESRQQEISEISRSLKALAKELNVPVIALSQLNRELEKRADKRPMMSDLRESGAIEQDADVIMFVY RESVYCEQCRKRDGTCTQNHERNSEIIIGKQRNGAIGTVNLAFFGEHTRFENLSAREG
Sequences:
>Translated_458_residues MTNPDLRKLPPQSLEAEMSVLGGILIDNDAINRVLEILGAEDFYRESHRKIFQAMMRLSDQREPCDLITMTDMLKKQGEL EEVGGAPYLLTLVDYVPTAANIAYYCKIVKEKAVNRKLISVATEIVTRGYDEQADINELLDLAQKNIYEISENKLRPQYV PVQAVLKEAFTILKTLHDRKEHVTGVPTGYVDLDHMTAGFQPGDLIIVAARPSMGKTTLALNVAEYASADPHNKKKVPSV IFSLEMGKEQLVMRFLASIAKVDFGRMRTGHFLDSDWPRLTRAAGILHDAKIFIDDTPAISVLELRSKARRLKSEHDIGL IIIDYLQLMRGGANPESRQQEISEISRSLKALAKELNVPVIALSQLNRELEKRADKRPMMSDLRESGAIEQDADVIMFVY RESVYCEQCRKRDGTCTQNHERNSEIIIGKQRNGAIGTVNLAFFGEHTRFENLSAREG >Mature_457_residues TNPDLRKLPPQSLEAEMSVLGGILIDNDAINRVLEILGAEDFYRESHRKIFQAMMRLSDQREPCDLITMTDMLKKQGELE EVGGAPYLLTLVDYVPTAANIAYYCKIVKEKAVNRKLISVATEIVTRGYDEQADINELLDLAQKNIYEISENKLRPQYVP VQAVLKEAFTILKTLHDRKEHVTGVPTGYVDLDHMTAGFQPGDLIIVAARPSMGKTTLALNVAEYASADPHNKKKVPSVI FSLEMGKEQLVMRFLASIAKVDFGRMRTGHFLDSDWPRLTRAAGILHDAKIFIDDTPAISVLELRSKARRLKSEHDIGLI IIDYLQLMRGGANPESRQQEISEISRSLKALAKELNVPVIALSQLNRELEKRADKRPMMSDLRESGAIEQDADVIMFVYR ESVYCEQCRKRDGTCTQNHERNSEIIIGKQRNGAIGTVNLAFFGEHTRFENLSAREG
Specific function: Participates In Initiation And Elongation During Chromosome Replication; It Exhibits DNA-Dependent ATPase Activity And Contains Distinct Active Sites For ATP Binding, DNA Binding, And Interaction With DNAc Protein, Primase, And Other Prepriming Proteins.
COG id: COG0305
COG function: function code L; Replicative DNA helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SF4 helicase domain [H]
Homologues:
Organism=Escherichia coli, GI1790486, Length=454, Percent_Identity=51.7621145374449, Blast_Score=430, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR007692 - InterPro: IPR007694 - InterPro: IPR007693 - InterPro: IPR016136 [H]
Pfam domain/function: PF00772 DnaB; PF03796 DnaB_C [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 51600; Mature: 51469
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPDLRKLPPQSLEAEMSVLGGILIDNDAINRVLEILGAEDFYRESHRKIFQAMMRLSD CCCCCCCCCCCHHHHHHHHHHCCCEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC QREPCDLITMTDMLKKQGELEEVGGAPYLLTLVDYVPTAANIAYYCKIVKEKAVNRKLIS CCCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VATEIVTRGYDEQADINELLDLAQKNIYEISENKLRPQYVPVQAVLKEAFTILKTLHDRK HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH EHVTGVPTGYVDLDHMTAGFQPGDLIIVAARPSMGKTTLALNVAEYASADPHNKKKVPSV HHCCCCCCCCEEHHHHHCCCCCCCEEEEEECCCCCCEEEEEEHHHHCCCCCCCHHHHHHH IFSLEMGKEQLVMRFLASIAKVDFGRMRTGHFLDSDWPRLTRAAGILHDAKIFIDDTPAI HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCH SVLELRSKARRLKSEHDIGLIIIDYLQLMRGGANPESRQQEISEISRSLKALAKELNVPV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE IALSQLNRELEKRADKRPMMSDLRESGAIEQDADVIMFVYRESVYCEQCRKRDGTCTQNH EEHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCC ERNSEIIIGKQRNGAIGTVNLAFFGEHTRFENLSAREG CCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure TNPDLRKLPPQSLEAEMSVLGGILIDNDAINRVLEILGAEDFYRESHRKIFQAMMRLSD CCCCCCCCCCHHHHHHHHHHCCCEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC QREPCDLITMTDMLKKQGELEEVGGAPYLLTLVDYVPTAANIAYYCKIVKEKAVNRKLIS CCCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VATEIVTRGYDEQADINELLDLAQKNIYEISENKLRPQYVPVQAVLKEAFTILKTLHDRK HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH EHVTGVPTGYVDLDHMTAGFQPGDLIIVAARPSMGKTTLALNVAEYASADPHNKKKVPSV HHCCCCCCCCEEHHHHHCCCCCCCEEEEEECCCCCCEEEEEEHHHHCCCCCCCHHHHHHH IFSLEMGKEQLVMRFLASIAKVDFGRMRTGHFLDSDWPRLTRAAGILHDAKIFIDDTPAI HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCH SVLELRSKARRLKSEHDIGLIIIDYLQLMRGGANPESRQQEISEISRSLKALAKELNVPV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE IALSQLNRELEKRADKRPMMSDLRESGAIEQDADVIMFVYRESVYCEQCRKRDGTCTQNH EEHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCC ERNSEIIIGKQRNGAIGTVNLAFFGEHTRFENLSAREG CCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377; 1312531 [H]