| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is arnT [H]
Identifier: 118578972
GI number: 118578972
Start: 569129
End: 570802
Strand: Direct
Name: arnT [H]
Synonym: Ppro_0533
Alternate gene names: 118578972
Gene position: 569129-570802 (Clockwise)
Preceding gene: 118578971
Following gene: 118578973
Centisome position: 14.2
GC content: 67.32
Gene sequence:
>1674_bases ATGAGAGACTACAAGGTATATGCCCGTAGCGGTTCGGAAGGGTGGCTGCGCGACCTGCTCTTCCTGCTGTTGCTGTTCAG CGTTCCCTTTCTCGCATCCCTGGGACGGCTGCCGCTGTTCGGTCCCTACGAAGGGGCGTATGCCGAGATCTCCCGCGCCA TGCTGGAGCGGGGAGATCTGATCACCACCTCGCTGGATCATCTCAACCGCTTCGGGAACCCGCCGCTGCTGTTCTGGCTC AACGCGGCCTCGCTGGCGTTCTTCGGACAGAACGAGTTCAGCGTCCGTTTTCCCACTGCCCTGTGCGGCCTGCTGACCCT GCCCGCGGTCTATGTCATTGCCCGCCGCCTGTACGACCGCCGCACCGCGCTATTGTCGGCCATCCTCCTGGGCAGCTGCA CCGGCTTTGCGCTCCTGTCGCGCGTCATCCTCACCCAGCTGCCGCTCTGCCTCTGTCTGACCGCTGCCCTGGGGAGCTTC CTCGTGGCTGGCCAGAGGGGCGAGCGATCGCGGGAGGCCAGCGGCCACTGGTATCCCTTCTACCTGTTCTGCGCCCTGGC CGTGCTGGCCGGCGGGATGGTCGGCATCCTCCTGCCCGTCGCCGTCATCCTGGTCTATCTCCTGCTGGCCGGGCGCTGGG AACTGCTGCCGCGCATGCGGTGCGGCAGCGGTCTGCTGCTGTTCCTGGTCGTGGCCGCACCCTGGTTCGTGGCGGTCTGG CTGGAGAGTCCCGAATCGGCCCATCTCCTCTCCGGTCAGGGGATAGGGCGATACGGCGCCTCCCTGGCGGAGGATCGACG CCCCTTCTGGCTGGTTGTACCGCTGCTGGTCGTTGGCCTGCTCCCTTGGTCAGGCTATATCCTCCCTGCGCTGTCTCGGG CCTGGCGGGAGCAGGGACGGGGTGGCGGCCGCTCCGGCCTGTTCCTGATGATCTGGGCCCTGGCGATACTGCTGTTCTTT GTCCTCTCCGGTTCCCGGCCGATTCCCGCGCTTTTGCCGGCCTTCCCCCCCCTGGCCATCCTGACCGCCCATCTGGTCAA GGGGGAACTGGAGCGGCGCGGCCGGGGGCTGAGGCTGGTCACGCGACTGCAGGGAGCCGTCATGGCGCTCCTGGGGGTGA CGGCTCTCGCCTATCCCCTGCTGCTGCGCTCCGTCCAGAGCCTTGCTGCGCTCCTGCCCTCTTGGGGCCATGCCCTGGAG CGCTGGGCCGAGCATGCGCCACGGCTTTCCCCGGCGGCCTGCATGCTGGTGGCCGGGCTGCTGCTTCTCCAGGGGGTTAT GTCCCTGGCTGTTTCGGAACGGAGGACGGGCAGGGCGCTGATCGTGCTCTGCCTCTGCTCTTTTGCCCTTGAAATTATCG TGCCGCGCCAGATAATGGGGACGATCGCCCAGGCAGAATCACCCCGCGATCTGGTCGTGAGGGCCGTTGAACTGGCCGGG GCTGACACGCCCATCGTTACCCTTGGCCCCCTGCACGGGGTTTCCTGGTATGCCGGCCGGCCGGTGCCGGATGCCGGAAA CAGGCAGCAGGACCTGGCCGCCCTGTGGCGCGGCACGGCTCCCCTGCTGGTCATCCTCGAAAAAGGGGAGCTGGATGCCC TGCTCCCCTCCCTGCGCCCCGCCCCGCGCATCCTGATGGAGTCGGGGCCGCGTCTTTTGATCAGTAACCGCTAG
Upstream 100 bases:
>100_bases AGGATGGGGATGTCGCCAACCCCAACCAGCGTGTCATCATGCATCCCCCCTTTTCCGTGGGACCTTTTGACCTCATTCGT CGGGAAAAAACCTCCATGCC
Downstream 100 bases:
>100_bases ACCGGGTCCCGATTTCCCGCGCAGCTTCCCGGATCAAGGCCCTGCCCCTGATCCGGTCGGGCCCGTAGGGAAGATTACCC GCACTTCAATGTTTTCCGGA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MRDYKVYARSGSEGWLRDLLFLLLLFSVPFLASLGRLPLFGPYEGAYAEISRAMLERGDLITTSLDHLNRFGNPPLLFWL NAASLAFFGQNEFSVRFPTALCGLLTLPAVYVIARRLYDRRTALLSAILLGSCTGFALLSRVILTQLPLCLCLTAALGSF LVAGQRGERSREASGHWYPFYLFCALAVLAGGMVGILLPVAVILVYLLLAGRWELLPRMRCGSGLLLFLVVAAPWFVAVW LESPESAHLLSGQGIGRYGASLAEDRRPFWLVVPLLVVGLLPWSGYILPALSRAWREQGRGGGRSGLFLMIWALAILLFF VLSGSRPIPALLPAFPPLAILTAHLVKGELERRGRGLRLVTRLQGAVMALLGVTALAYPLLLRSVQSLAALLPSWGHALE RWAEHAPRLSPAACMLVAGLLLLQGVMSLAVSERRTGRALIVLCLCSFALEIIVPRQIMGTIAQAESPRDLVVRAVELAG ADTPIVTLGPLHGVSWYAGRPVPDAGNRQQDLAALWRGTAPLLVILEKGELDALLPSLRPAPRILMESGPRLLISNR
Sequences:
>Translated_557_residues MRDYKVYARSGSEGWLRDLLFLLLLFSVPFLASLGRLPLFGPYEGAYAEISRAMLERGDLITTSLDHLNRFGNPPLLFWL NAASLAFFGQNEFSVRFPTALCGLLTLPAVYVIARRLYDRRTALLSAILLGSCTGFALLSRVILTQLPLCLCLTAALGSF LVAGQRGERSREASGHWYPFYLFCALAVLAGGMVGILLPVAVILVYLLLAGRWELLPRMRCGSGLLLFLVVAAPWFVAVW LESPESAHLLSGQGIGRYGASLAEDRRPFWLVVPLLVVGLLPWSGYILPALSRAWREQGRGGGRSGLFLMIWALAILLFF VLSGSRPIPALLPAFPPLAILTAHLVKGELERRGRGLRLVTRLQGAVMALLGVTALAYPLLLRSVQSLAALLPSWGHALE RWAEHAPRLSPAACMLVAGLLLLQGVMSLAVSERRTGRALIVLCLCSFALEIIVPRQIMGTIAQAESPRDLVVRAVELAG ADTPIVTLGPLHGVSWYAGRPVPDAGNRQQDLAALWRGTAPLLVILEKGELDALLPSLRPAPRILMESGPRLLISNR >Mature_557_residues MRDYKVYARSGSEGWLRDLLFLLLLFSVPFLASLGRLPLFGPYEGAYAEISRAMLERGDLITTSLDHLNRFGNPPLLFWL NAASLAFFGQNEFSVRFPTALCGLLTLPAVYVIARRLYDRRTALLSAILLGSCTGFALLSRVILTQLPLCLCLTAALGSF LVAGQRGERSREASGHWYPFYLFCALAVLAGGMVGILLPVAVILVYLLLAGRWELLPRMRCGSGLLLFLVVAAPWFVAVW LESPESAHLLSGQGIGRYGASLAEDRRPFWLVVPLLVVGLLPWSGYILPALSRAWREQGRGGGRSGLFLMIWALAILLFF VLSGSRPIPALLPAFPPLAILTAHLVKGELERRGRGLRLVTRLQGAVMALLGVTALAYPLLLRSVQSLAALLPSWGHALE RWAEHAPRLSPAACMLVAGLLLLQGVMSLAVSERRTGRALIVLCLCSFALEIIVPRQIMGTIAQAESPRDLVVRAVELAG ADTPIVTLGPLHGVSWYAGRPVPDAGNRQQDLAALWRGTAPLLVILEKGELDALLPSLRPAPRILMESGPRLLISNR
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=372, Percent_Identity=29.0322580645161, Blast_Score=116, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 60599; Mature: 60599
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDYKVYARSGSEGWLRDLLFLLLLFSVPFLASLGRLPLFGPYEGAYAEISRAMLERGDL CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC ITTSLDHLNRFGNPPLLFWLNAASLAFFGQNEFSVRFPTALCGLLTLPAVYVIARRLYDR HHHHHHHHHHCCCCCEEEEECHHHHEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHH RTALLSAILLGSCTGFALLSRVILTQLPLCLCLTAALGSFLVAGQRGERSREASGHWYPF HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH YLFCALAVLAGGMVGILLPVAVILVYLLLAGRWELLPRMRCGSGLLLFLVVAAPWFVAVW HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHEEHH LESPESAHLLSGQGIGRYGASLAEDRRPFWLVVPLLVVGLLPWSGYILPALSRAWREQGR HCCCCCCCEECCCCCCHHCCHHHHCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC GGGRSGLFLMIWALAILLFFVLSGSRPIPALLPAFPPLAILTAHLVKGELERRGRGLRLV CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHH TRLQGAVMALLGVTALAYPLLLRSVQSLAALLPSWGHALERWAEHAPRLSPAACMLVAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LLLQGVMSLAVSERRTGRALIVLCLCSFALEIIVPRQIMGTIAQAESPRDLVVRAVELAG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCC ADTPIVTLGPLHGVSWYAGRPVPDAGNRQQDLAALWRGTAPLLVILEKGELDALLPSLRP CCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCC APRILMESGPRLLISNR CHHHHHCCCCEEEECCC >Mature Secondary Structure MRDYKVYARSGSEGWLRDLLFLLLLFSVPFLASLGRLPLFGPYEGAYAEISRAMLERGDL CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC ITTSLDHLNRFGNPPLLFWLNAASLAFFGQNEFSVRFPTALCGLLTLPAVYVIARRLYDR HHHHHHHHHHCCCCCEEEEECHHHHEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHH RTALLSAILLGSCTGFALLSRVILTQLPLCLCLTAALGSFLVAGQRGERSREASGHWYPF HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH YLFCALAVLAGGMVGILLPVAVILVYLLLAGRWELLPRMRCGSGLLLFLVVAAPWFVAVW HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHEEHH LESPESAHLLSGQGIGRYGASLAEDRRPFWLVVPLLVVGLLPWSGYILPALSRAWREQGR HCCCCCCCEECCCCCCHHCCHHHHCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC GGGRSGLFLMIWALAILLFFVLSGSRPIPALLPAFPPLAILTAHLVKGELERRGRGLRLV CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHH TRLQGAVMALLGVTALAYPLLLRSVQSLAALLPSWGHALERWAEHAPRLSPAACMLVAGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LLLQGVMSLAVSERRTGRALIVLCLCSFALEIIVPRQIMGTIAQAESPRDLVVRAVELAG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCC ADTPIVTLGPLHGVSWYAGRPVPDAGNRQQDLAALWRGTAPLLVILEKGELDALLPSLRP CCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCC APRILMESGPRLLISNR CHHHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA