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The map label for this gene is yrrO [H]

Identifier: 118578971

GI number: 118578971

Start: 567900

End: 569132

Strand: Direct

Name: yrrO [H]

Synonym: Ppro_0532

Alternate gene names: 118578971

Gene position: 567900-569132 (Clockwise)

Preceding gene: 118578965

Following gene: 118578972

Centisome position: 14.17

GC content: 64.15

Gene sequence:

>1233_bases
ATGCAAAGGCCCGAGCTGCTGGCCCCTGCCGGCAATATGGAAAAACTACGCACAGCCGTACACTACGGTGCCGATGCCGT
CTATCTTGGAGGCCGTGCCTTTGGCCTGCGCAACCTGGCTGACAATTTCAGCATCCATGAGATGGCGGCTGCCCTGGAGT
TCTGCCACGAACGGGAGGTAAGGGCCTACCTGACGGTCAACAGCTATCCCCACAACGATGCCCTGGAGCGCCTGGAACGC
TACCTGTCCGAGGTGGCGGAGCTCCCCTTCGACGCCTACATCGTGGCAGATCCGGGGGTCATGGAACTGGCGCGAGAGAT
CTCGCCCCGGCGTGAACTGCACCTCTCCACCCAGGCCAACACCATCAACTGGCGCTCGGCCCGCTTCTGGCGCAGCCAGG
GGATCTCGCGGGTCAACCTGGCCCGGGAGACGACCCTGGAGGCCATGGCCGAGACCGTCGCCAAAAGCGGCCTGGATGTG
GAGGTCTTCGTCCACGGTGCGCTCTGCGTCTCCTATTCCGGCCGCTGCCTGCTCTCCAGCGCCATGGCCGGCCGCGACGC
CAACCAGGGGGAGTGCGCCCACCCCTGCCGCTGGAACTATCATCTGGTGGAGGAAAAGCGGCCGGGCGAATTCTTCCCGG
TTCATGAGGATGAGAGCGGCACCTTCATCTTCAACTCCCGCGATCTCTGTCTGCTGGAACATCTGCCGGCGATCGTCTCC
AGCGGTGTCGCCTCGCTCAAGATCGAGGGGCGCATGAAGGGGATCAACTACGTTGCCTCGGTGCTGCGGGTCTACCGTCA
GGCTCTGGATGAGTACGCGGCCGACCCGCTGGGGTATCGTTGCCGCCCCGAGTGGCTGGAGGAGTTGTCCAAGCTGAGCC
ACCGCGGCTACACCACCGGCTTCCTCTTCGGTGCGCCCCGCGACGTGGGGCAGGAGTACACTTCCGCCTATCTCCGCAGC
CATGAATTCGTTGGCCTGGTGGAGGCGTTGCGGGAGGATGGTTCGGTGGTCGTGGGGGTGCGCAACCGCATCAACGTGGG
GGACGAGCTGGAGTTCGTCGGGCCGGGCATGCGTTCACACCGACTGCGCCTGGATGGCCTCCTGCTGCTTGACCCCGAGG
GCGGGACCCAGGATGGGGATGTCGCCAACCCCAACCAGCGTGTCATCATGCATCCCCCCTTTTCCGTGGGACCTTTTGAC
CTCATTCGTCGGGAAAAAACCTCCATGCCATGA

Upstream 100 bases:

>100_bases
GTTTGTCAAGTGAAAGCTGCCTTTTCAGGTTTAAATGGCATGGGCGATATGATACCATCCGGCCTGTATGACCGCCACCA
ACGATGACCGGGAACCCCCC

Downstream 100 bases:

>100_bases
GAGACTACAAGGTATATGCCCGTAGCGGTTCGGAAGGGTGGCTGCGCGACCTGCTCTTCCTGCTGTTGCTGTTCAGCGTT
CCCTTTCTCGCATCCCTGGG

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MQRPELLAPAGNMEKLRTAVHYGADAVYLGGRAFGLRNLADNFSIHEMAAALEFCHEREVRAYLTVNSYPHNDALERLER
YLSEVAELPFDAYIVADPGVMELAREISPRRELHLSTQANTINWRSARFWRSQGISRVNLARETTLEAMAETVAKSGLDV
EVFVHGALCVSYSGRCLLSSAMAGRDANQGECAHPCRWNYHLVEEKRPGEFFPVHEDESGTFIFNSRDLCLLEHLPAIVS
SGVASLKIEGRMKGINYVASVLRVYRQALDEYAADPLGYRCRPEWLEELSKLSHRGYTTGFLFGAPRDVGQEYTSAYLRS
HEFVGLVEALREDGSVVVGVRNRINVGDELEFVGPGMRSHRLRLDGLLLLDPEGGTQDGDVANPNQRVIMHPPFSVGPFD
LIRREKTSMP

Sequences:

>Translated_410_residues
MQRPELLAPAGNMEKLRTAVHYGADAVYLGGRAFGLRNLADNFSIHEMAAALEFCHEREVRAYLTVNSYPHNDALERLER
YLSEVAELPFDAYIVADPGVMELAREISPRRELHLSTQANTINWRSARFWRSQGISRVNLARETTLEAMAETVAKSGLDV
EVFVHGALCVSYSGRCLLSSAMAGRDANQGECAHPCRWNYHLVEEKRPGEFFPVHEDESGTFIFNSRDLCLLEHLPAIVS
SGVASLKIEGRMKGINYVASVLRVYRQALDEYAADPLGYRCRPEWLEELSKLSHRGYTTGFLFGAPRDVGQEYTSAYLRS
HEFVGLVEALREDGSVVVGVRNRINVGDELEFVGPGMRSHRLRLDGLLLLDPEGGTQDGDVANPNQRVIMHPPFSVGPFD
LIRREKTSMP
>Mature_410_residues
MQRPELLAPAGNMEKLRTAVHYGADAVYLGGRAFGLRNLADNFSIHEMAAALEFCHEREVRAYLTVNSYPHNDALERLER
YLSEVAELPFDAYIVADPGVMELAREISPRRELHLSTQANTINWRSARFWRSQGISRVNLARETTLEAMAETVAKSGLDV
EVFVHGALCVSYSGRCLLSSAMAGRDANQGECAHPCRWNYHLVEEKRPGEFFPVHEDESGTFIFNSRDLCLLEHLPAIVS
SGVASLKIEGRMKGINYVASVLRVYRQALDEYAADPLGYRCRPEWLEELSKLSHRGYTTGFLFGAPRDVGQEYTSAYLRS
HEFVGLVEALREDGSVVVGVRNRINVGDELEFVGPGMRSHRLRLDGLLLLDPEGGTQDGDVANPNQRVIMHPPFSVGPFD
LIRREKTSMP

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=397, Percent_Identity=39.0428211586902, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI87081910, Length=331, Percent_Identity=34.441087613293, Blast_Score=181, Evalue=1e-46,
Organism=Escherichia coli, GI1789548, Length=321, Percent_Identity=32.398753894081, Blast_Score=155, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 45910; Mature: 45910

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRPELLAPAGNMEKLRTAVHYGADAVYLGGRAFGLRNLADNFSIHEMAAALEFCHEREV
CCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHCCCE
RAYLTVNSYPHNDALERLERYLSEVAELPFDAYIVADPGVMELAREISPRRELHLSTQAN
EEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCEEEEECCCC
TINWRSARFWRSQGISRVNLARETTLEAMAETVAKSGLDVEVFVHGALCVSYSGRCLLSS
CCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHH
AMAGRDANQGECAHPCRWNYHLVEEKRPGEFFPVHEDESGTFIFNSRDLCLLEHLPAIVS
HHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCEEEECCCCCHHHHHHHHHHH
SGVASLKIEGRMKGINYVASVLRVYRQALDEYAADPLGYRCRPEWLEELSKLSHRGYTTG
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEE
FLFGAPRDVGQEYTSAYLRSHEFVGLVEALREDGSVVVGVRNRINVGDELEFVGPGMRSH
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCHHC
RLRLDGLLLLDPEGGTQDGDVANPNQRVIMHPPFSVGPFDLIRREKTSMP
EEEECCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MQRPELLAPAGNMEKLRTAVHYGADAVYLGGRAFGLRNLADNFSIHEMAAALEFCHEREV
CCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHCCCE
RAYLTVNSYPHNDALERLERYLSEVAELPFDAYIVADPGVMELAREISPRRELHLSTQAN
EEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCEEEEECCCC
TINWRSARFWRSQGISRVNLARETTLEAMAETVAKSGLDVEVFVHGALCVSYSGRCLLSS
CCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHH
AMAGRDANQGECAHPCRWNYHLVEEKRPGEFFPVHEDESGTFIFNSRDLCLLEHLPAIVS
HHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCEEEECCCCCHHHHHHHHHHH
SGVASLKIEGRMKGINYVASVLRVYRQALDEYAADPLGYRCRPEWLEELSKLSHRGYTTG
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEE
FLFGAPRDVGQEYTSAYLRSHEFVGLVEALREDGSVVVGVRNRINVGDELEFVGPGMRSH
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCHHC
RLRLDGLLLLDPEGGTQDGDVANPNQRVIMHPPFSVGPFDLIRREKTSMP
EEEECCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]