Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is 118578749
Identifier: 118578749
GI number: 118578749
Start: 304788
End: 305543
Strand: Direct
Name: 118578749
Synonym: Ppro_0307
Alternate gene names: NA
Gene position: 304788-305543 (Clockwise)
Preceding gene: 118578748
Following gene: 118578750
Centisome position: 7.6
GC content: 61.24
Gene sequence:
>756_bases ATGCTCAGAAAAATCGTCAAGATCGATCAGGAAAAATGCAACGGCTGCGGACAGTGCGTACCATCCTGCGCCGAGGGGGC GATACGTATTGTAAACGGCAAGGCGGTTCTGGCCGCCGATAACCTGTGCGATGGCCTGGGAGCCTGCCTGGGTGATTGCC CCTTGGGCGCCATCACCGTCGAGGAGCGCGAGGCCGACGAGTTCGATGAAGCGGCCGTGGAGCGGCACCTGAAGGCCCAG GGAAGAGACATTGCGCCCCATCAGAAGGCTCAGGCATCGCAAGCGTCCCCCGGTCATCATCACCATGGCGGTGGCTGCCC CGGTTCACGGGCCATGAGTTTCAGTCGTCCCACGGGGGAGTCGACGGATCAGCCTAAGGGGAGTCGCCAGAGCCAGTTGG GGCAATGGCCGGTACAGCTCAGCCTGGTGTCCACCAGCGCCCCCTATTTCCAGGGCGCTGACCTGCTAATTACCGCTGAC TGCGTTCCGGTGGCCTATGCCGGGTATCACGAGGATTTTCTGAAGGGGAAGGCGGTTGTCATGGGCTGCCCCAAGCTGGA TGACAATGGCTTCTATCAGCAGAAGCTGACCGAACTGTTCATCAAATCGGACATCAGGAGTATCACCGTGCTGAAGATGG AGGTCCCCTGCTGCGGCGGCATCGCCTTGGCCACCCGTCAGGCACTGGCCGCCTCGGGCAAGCAGATCCCCTATCGCGAG GTCGTCATCACCCTGCAGGGTGAGGTGAAGGAATAG
Upstream 100 bases:
>100_bases GCAGACTGGCCTATCTCTGGCACTATCTCTTCTGAAGCCACGAACCGCGCGACCTGTTTGACGGACATCAACGGACAGAC ACCACAAGGAGAATCAAATC
Downstream 100 bases:
>100_bases ACTGGAAATAGTCCCGGGCTATGGAACGCGGGAAAAGCGGATACAACTGGATAACGTCGGGTTTGATTCCCCGTCCGGTT CGTATCCGTTTTTTCCGGCC
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MLRKIVKIDQEKCNGCGQCVPSCAEGAIRIVNGKAVLAADNLCDGLGACLGDCPLGAITVEEREADEFDEAAVERHLKAQ GRDIAPHQKAQASQASPGHHHHGGGCPGSRAMSFSRPTGESTDQPKGSRQSQLGQWPVQLSLVSTSAPYFQGADLLITAD CVPVAYAGYHEDFLKGKAVVMGCPKLDDNGFYQQKLTELFIKSDIRSITVLKMEVPCCGGIALATRQALAASGKQIPYRE VVITLQGEVKE
Sequences:
>Translated_251_residues MLRKIVKIDQEKCNGCGQCVPSCAEGAIRIVNGKAVLAADNLCDGLGACLGDCPLGAITVEEREADEFDEAAVERHLKAQ GRDIAPHQKAQASQASPGHHHHGGGCPGSRAMSFSRPTGESTDQPKGSRQSQLGQWPVQLSLVSTSAPYFQGADLLITAD CVPVAYAGYHEDFLKGKAVVMGCPKLDDNGFYQQKLTELFIKSDIRSITVLKMEVPCCGGIALATRQALAASGKQIPYRE VVITLQGEVKE >Mature_251_residues MLRKIVKIDQEKCNGCGQCVPSCAEGAIRIVNGKAVLAADNLCDGLGACLGDCPLGAITVEEREADEFDEAAVERHLKAQ GRDIAPHQKAQASQASPGHHHHGGGCPGSRAMSFSRPTGESTDQPKGSRQSQLGQWPVQLSLVSTSAPYFQGADLLITAD CVPVAYAGYHEDFLKGKAVVMGCPKLDDNGFYQQKLTELFIKSDIRSITVLKMEVPCCGGIALATRQALAASGKQIPYRE VVITLQGEVKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26750; Mature: 26750
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKIVKIDQEKCNGCGQCVPSCAEGAIRIVNGKAVLAADNLCDGLGACLGDCPLGAITV CCCHHHHHCHHHCCCHHHHHCHHCCCCEEEECCCEEEEECHHHHHHHHHHHCCCCCEEEE EEREADEFDEAAVERHLKAQGRDIAPHQKAQASQASPGHHHHGGGCPGSRAMSFSRPTGE CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCC STDQPKGSRQSQLGQWPVQLSLVSTSAPYFQGADLLITADCVPVAYAGYHEDFLKGKAVV CCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCEEECCCHHHHHCCCEEE MGCPKLDDNGFYQQKLTELFIKSDIRSITVLKMEVPCCGGIALATRQALAASGKQIPYRE EECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEE VVITLQGEVKE EEEEECCCCCC >Mature Secondary Structure MLRKIVKIDQEKCNGCGQCVPSCAEGAIRIVNGKAVLAADNLCDGLGACLGDCPLGAITV CCCHHHHHCHHHCCCHHHHHCHHCCCCEEEECCCEEEEECHHHHHHHHHHHCCCCCEEEE EEREADEFDEAAVERHLKAQGRDIAPHQKAQASQASPGHHHHGGGCPGSRAMSFSRPTGE CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCC STDQPKGSRQSQLGQWPVQLSLVSTSAPYFQGADLLITADCVPVAYAGYHEDFLKGKAVV CCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCEEEEECCCCEEECCCHHHHHCCCEEE MGCPKLDDNGFYQQKLTELFIKSDIRSITVLKMEVPCCGGIALATRQALAASGKQIPYRE EECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEE VVITLQGEVKE EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]