Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is ygbA [C]
Identifier: 118578748
GI number: 118578748
Start: 304366
End: 304722
Strand: Direct
Name: ygbA [C]
Synonym: Ppro_0306
Alternate gene names: 118578748
Gene position: 304366-304722 (Clockwise)
Preceding gene: 118578744
Following gene: 118578749
Centisome position: 7.59
GC content: 59.66
Gene sequence:
>357_bases ATGATCACAACCATGGAAACGATGACGAAGCGACAGAAGAAGGATATCAGGCTGCTGACAGGGTTTGTACGGCTCTACTG CGCGGGGCATCACGGCGAGACCAGCCGGGTCGACGTCAGGCTTCCCGCAGATCTGGGGACGGTGCCGCTCTGCGGCGAGT GCGGCCAGCTGTTGTCATACGCCGTTTCGAAACGCCTGTCATGTCCCCTGGAGGGGGAAAAGCCGAGCTGTAAGCGCTGC CGGATCCATTGCTACGGTGACCGGGAACGGCAAAAAATCCGCCAGGTCATGGCCTGGGCGGGGAAGAGGATGATCATGTC CGGCAGACTGGCCTATCTCTGGCACTATCTCTTCTGA
Upstream 100 bases:
>100_bases GATTTAGCCGATGGGGTACTGTAATGCAAAGGCAGGCGGGATGCAAAGGAAAAGCTGATAATATTGACCTGGGTCATGTC TGATTGCGTTCCGGGCTGGC
Downstream 100 bases:
>100_bases AGCCACGAACCGCGCGACCTGTTTGACGGACATCAACGGACAGACACCACAAGGAGAATCAAATCATGCTCAGAAAAATC GTCAAGATCGATCAGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MITTMETMTKRQKKDIRLLTGFVRLYCAGHHGETSRVDVRLPADLGTVPLCGECGQLLSYAVSKRLSCPLEGEKPSCKRC RIHCYGDRERQKIRQVMAWAGKRMIMSGRLAYLWHYLF
Sequences:
>Translated_118_residues MITTMETMTKRQKKDIRLLTGFVRLYCAGHHGETSRVDVRLPADLGTVPLCGECGQLLSYAVSKRLSCPLEGEKPSCKRC RIHCYGDRERQKIRQVMAWAGKRMIMSGRLAYLWHYLF >Mature_118_residues MITTMETMTKRQKKDIRLLTGFVRLYCAGHHGETSRVDVRLPADLGTVPLCGECGQLLSYAVSKRLSCPLEGEKPSCKRC RIHCYGDRERQKIRQVMAWAGKRMIMSGRLAYLWHYLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13609; Mature: 13609
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 11.0 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 11.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITTMETMTKRQKKDIRLLTGFVRLYCAGHHGETSRVDVRLPADLGTVPLCGECGQLLSY CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHH AVSKRLSCPLEGEKPSCKRCRIHCYGDRERQKIRQVMAWAGKRMIMSGRLAYLWHYLF HHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHC >Mature Secondary Structure MITTMETMTKRQKKDIRLLTGFVRLYCAGHHGETSRVDVRLPADLGTVPLCGECGQLLSY CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHH AVSKRLSCPLEGEKPSCKRCRIHCYGDRERQKIRQVMAWAGKRMIMSGRLAYLWHYLF HHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA