Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is ygbA [C]

Identifier: 118578748

GI number: 118578748

Start: 304366

End: 304722

Strand: Direct

Name: ygbA [C]

Synonym: Ppro_0306

Alternate gene names: 118578748

Gene position: 304366-304722 (Clockwise)

Preceding gene: 118578744

Following gene: 118578749

Centisome position: 7.59

GC content: 59.66

Gene sequence:

>357_bases
ATGATCACAACCATGGAAACGATGACGAAGCGACAGAAGAAGGATATCAGGCTGCTGACAGGGTTTGTACGGCTCTACTG
CGCGGGGCATCACGGCGAGACCAGCCGGGTCGACGTCAGGCTTCCCGCAGATCTGGGGACGGTGCCGCTCTGCGGCGAGT
GCGGCCAGCTGTTGTCATACGCCGTTTCGAAACGCCTGTCATGTCCCCTGGAGGGGGAAAAGCCGAGCTGTAAGCGCTGC
CGGATCCATTGCTACGGTGACCGGGAACGGCAAAAAATCCGCCAGGTCATGGCCTGGGCGGGGAAGAGGATGATCATGTC
CGGCAGACTGGCCTATCTCTGGCACTATCTCTTCTGA

Upstream 100 bases:

>100_bases
GATTTAGCCGATGGGGTACTGTAATGCAAAGGCAGGCGGGATGCAAAGGAAAAGCTGATAATATTGACCTGGGTCATGTC
TGATTGCGTTCCGGGCTGGC

Downstream 100 bases:

>100_bases
AGCCACGAACCGCGCGACCTGTTTGACGGACATCAACGGACAGACACCACAAGGAGAATCAAATCATGCTCAGAAAAATC
GTCAAGATCGATCAGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MITTMETMTKRQKKDIRLLTGFVRLYCAGHHGETSRVDVRLPADLGTVPLCGECGQLLSYAVSKRLSCPLEGEKPSCKRC
RIHCYGDRERQKIRQVMAWAGKRMIMSGRLAYLWHYLF

Sequences:

>Translated_118_residues
MITTMETMTKRQKKDIRLLTGFVRLYCAGHHGETSRVDVRLPADLGTVPLCGECGQLLSYAVSKRLSCPLEGEKPSCKRC
RIHCYGDRERQKIRQVMAWAGKRMIMSGRLAYLWHYLF
>Mature_118_residues
MITTMETMTKRQKKDIRLLTGFVRLYCAGHHGETSRVDVRLPADLGTVPLCGECGQLLSYAVSKRLSCPLEGEKPSCKRC
RIHCYGDRERQKIRQVMAWAGKRMIMSGRLAYLWHYLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13609; Mature: 13609

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
11.0 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
11.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTMETMTKRQKKDIRLLTGFVRLYCAGHHGETSRVDVRLPADLGTVPLCGECGQLLSY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHH
AVSKRLSCPLEGEKPSCKRCRIHCYGDRERQKIRQVMAWAGKRMIMSGRLAYLWHYLF
HHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHC
>Mature Secondary Structure
MITTMETMTKRQKKDIRLLTGFVRLYCAGHHGETSRVDVRLPADLGTVPLCGECGQLLSY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHH
AVSKRLSCPLEGEKPSCKRCRIHCYGDRERQKIRQVMAWAGKRMIMSGRLAYLWHYLF
HHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA