Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is 118578585
Identifier: 118578585
GI number: 118578585
Start: 150318
End: 151118
Strand: Direct
Name: 118578585
Synonym: Ppro_0141
Alternate gene names: NA
Gene position: 150318-151118 (Clockwise)
Preceding gene: 118578583
Following gene: 118578586
Centisome position: 3.75
GC content: 46.07
Gene sequence:
>801_bases TTGATTTCCCAAGTTACTGATGCTATCAGTGAAGAAGTGCTGATGTGGCAGAACCGCCCACTGGACGAGGTCTACCCCAT CGTCTATCTTGATGCAGTCAGAATAAAGGTGCGTCACGACAGCAGGGTAATCAACAAAGCAGTTTACCTTGCTATCGGCA TCAATATGGATGGCATCAAGGAAGTTCTTGGCATGTGGACTTCTGAAAACGAGGGTGCTAAATTCTGGCTTCAAGTTGTC ACCGAATTGAAAAACCGTGGGGTGAAAGAAATCTTCATTGCCTGTGTTGATGGACTCAAGGGATTTCCAGAGGCAATAGA AGCAGTGTATCCAAATACCCAGATTCAGCTCTGCATCGTCCATATGGTGCGGCACAGCTTGAACTATGTATCATGGAAAC AGCGTAAAGAAGTTGCAACAGACTTAAAGGCCATTTATCAAGCACCAACCGTAGAAATGGCAGAGAAAAATCTCGATGCA TTCGCCGCCAAATGGGACGCCAGTCATCCGACTATAGCAAGGTCATGGCGAAACAACTGGGAACGTATTATCCCACTGTT TTCATATCCAACAGAGATTCGTAAAGCCATCTACACGACCAATGCCATCGAATCTCTGAACATGTCACTTCGCAAGGTCA CCAAGAATCGTGGTCACTTTCCAAGTGACGAAGCGATGTTCAAGTTGCTCTATCTGGCCTTGAAGAACATTGCGAAGAAA TGGACAATGCCGATTAGGGACTGGAAGTCAGCATTGAACCAGTTTAGCATCATGTTTCACGGCAGGATGCCGACCTTCTG A
Upstream 100 bases:
>100_bases GAATTTATGTCGAAAAAAGAACAATTACAAAAAAACCAATAAACTTAAAATATTTACAGCTGTGCAATCAATTTTAACCG GACAGTAGTGTTCCCCAACC
Downstream 100 bases:
>100_bases ATCTGGGGAAAAGCATATACATGTAGATGCATCGGGATAAGTCGCAAAAACCGTAAAAGCATATACATATAGATACAAAG TCGTTATCTACAGGTAGATG
Product: transposase, mutator type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MISQVTDAISEEVLMWQNRPLDEVYPIVYLDAVRIKVRHDSRVINKAVYLAIGINMDGIKEVLGMWTSENEGAKFWLQVV TELKNRGVKEIFIACVDGLKGFPEAIEAVYPNTQIQLCIVHMVRHSLNYVSWKQRKEVATDLKAIYQAPTVEMAEKNLDA FAAKWDASHPTIARSWRNNWERIIPLFSYPTEIRKAIYTTNAIESLNMSLRKVTKNRGHFPSDEAMFKLLYLALKNIAKK WTMPIRDWKSALNQFSIMFHGRMPTF
Sequences:
>Translated_266_residues MISQVTDAISEEVLMWQNRPLDEVYPIVYLDAVRIKVRHDSRVINKAVYLAIGINMDGIKEVLGMWTSENEGAKFWLQVV TELKNRGVKEIFIACVDGLKGFPEAIEAVYPNTQIQLCIVHMVRHSLNYVSWKQRKEVATDLKAIYQAPTVEMAEKNLDA FAAKWDASHPTIARSWRNNWERIIPLFSYPTEIRKAIYTTNAIESLNMSLRKVTKNRGHFPSDEAMFKLLYLALKNIAKK WTMPIRDWKSALNQFSIMFHGRMPTF >Mature_266_residues MISQVTDAISEEVLMWQNRPLDEVYPIVYLDAVRIKVRHDSRVINKAVYLAIGINMDGIKEVLGMWTSENEGAKFWLQVV TELKNRGVKEIFIACVDGLKGFPEAIEAVYPNTQIQLCIVHMVRHSLNYVSWKQRKEVATDLKAIYQAPTVEMAEKNLDA FAAKWDASHPTIARSWRNNWERIIPLFSYPTEIRKAIYTTNAIESLNMSLRKVTKNRGHFPSDEAMFKLLYLALKNIAKK WTMPIRDWKSALNQFSIMFHGRMPTF
Specific function: Required for the transposition of the insertion element [H]
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 30809; Mature: 30809
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISQVTDAISEEVLMWQNRPLDEVYPIVYLDAVRIKVRHDSRVINKAVYLAIGINMDGIK CCCHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEEEEECHHHHHHHHEEEEEECCHHHHH EVLGMWTSENEGAKFWLQVVTELKNRGVKEIFIACVDGLKGFPEAIEAVYPNTQIQLCIV HHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHH HMVRHSLNYVSWKQRKEVATDLKAIYQAPTVEMAEKNLDAFAAKWDASHPTIARSWRNNW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCH ERIIPLFSYPTEIRKAIYTTNAIESLNMSLRKVTKNRGHFPSDEAMFKLLYLALKNIAKK HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH WTMPIRDWKSALNQFSIMFHGRMPTF HCCCHHHHHHHHHHHHHEEECCCCCC >Mature Secondary Structure MISQVTDAISEEVLMWQNRPLDEVYPIVYLDAVRIKVRHDSRVINKAVYLAIGINMDGIK CCCHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEEEEECHHHHHHHHEEEEEECCHHHHH EVLGMWTSENEGAKFWLQVVTELKNRGVKEIFIACVDGLKGFPEAIEAVYPNTQIQLCIV HHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHH HMVRHSLNYVSWKQRKEVATDLKAIYQAPTVEMAEKNLDAFAAKWDASHPTIARSWRNNW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCH ERIIPLFSYPTEIRKAIYTTNAIESLNMSLRKVTKNRGHFPSDEAMFKLLYLALKNIAKK HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH WTMPIRDWKSALNQFSIMFHGRMPTF HCCCHHHHHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]