Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is 118578583
Identifier: 118578583
GI number: 118578583
Start: 148582
End: 149022
Strand: Direct
Name: 118578583
Synonym: Ppro_0139
Alternate gene names: NA
Gene position: 148582-149022 (Clockwise)
Preceding gene: 118578581
Following gene: 118578585
Centisome position: 3.71
GC content: 46.03
Gene sequence:
>441_bases ATGGCCACAACAGACGAACTGCTCGACGTTTTGATGAAGGATTACAAGAAACCAGAAGACCTGATTGGAGAGAATGGACT TCTGAAACAACTGACCAAGAGACTGTTAGAGCGGGCAATGCAAACCGAACTGACTGAACACCTTGGTTATGAGAAACATG CTCCCACCGGCAAGAACAGTGGAAACTCCAGAAACGGTGGATATAAGAAAACCATCACTGGTGATTTTGGCAACCTCGAT ATTACTACCCCCCGTGACCGCAATTCAACATTTGAACCGGTCATCCTGCCCAAAGGTGAAACACGTTTTACTGGCTTTGA TGACAAGATAATCTCTATGTACGCCCGTGGCATGACCACCCGTGACATCCAAGGACATCTGCAAGAGATTTACGGTATTG ATGTTTCCCCAACCACTACTGTCCGGTTAATAGTCGAATAA
Upstream 100 bases:
>100_bases TAGAACTGTTCTTGGTAAATCAGAAAACCTTCCTTCGGGGGTGTAAAATAGATTGTGTAAGTGGCTAAAATCGGTAAAAC CCAAGATAAAGGAGAAACCG
Downstream 100 bases:
>100_bases GTTCAGCTGGTTGTAGTCATAGGGGCCGGAATTTTGCTTGAGAGCTTCCGTAACCAGCTGTGAAATGGGCTTTTTCTCGA ACAAGTTGACCTCCAGAATC
Product: transposase mutator family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MATTDELLDVLMKDYKKPEDLIGENGLLKQLTKRLLERAMQTELTEHLGYEKHAPTGKNSGNSRNGGYKKTITGDFGNLD ITTPRDRNSTFEPVILPKGETRFTGFDDKIISMYARGMTTRDIQGHLQEIYGIDVSPTTTVRLIVE
Sequences:
>Translated_146_residues MATTDELLDVLMKDYKKPEDLIGENGLLKQLTKRLLERAMQTELTEHLGYEKHAPTGKNSGNSRNGGYKKTITGDFGNLD ITTPRDRNSTFEPVILPKGETRFTGFDDKIISMYARGMTTRDIQGHLQEIYGIDVSPTTTVRLIVE >Mature_145_residues ATTDELLDVLMKDYKKPEDLIGENGLLKQLTKRLLERAMQTELTEHLGYEKHAPTGKNSGNSRNGGYKKTITGDFGNLDI TTPRDRNSTFEPVILPKGETRFTGFDDKIISMYARGMTTRDIQGHLQEIYGIDVSPTTTVRLIVE
Specific function: Required for the transposition of the insertion element [H]
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 16435; Mature: 16304
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTDELLDVLMKDYKKPEDLIGENGLLKQLTKRLLERAMQTELTEHLGYEKHAPTGKNS CCCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GNSRNGGYKKTITGDFGNLDITTPRDRNSTFEPVILPKGETRFTGFDDKIISMYARGMTT CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCC RDIQGHLQEIYGIDVSPTTTVRLIVE HHHHHHHHHHHCCCCCCCCEEEEEEC >Mature Secondary Structure ATTDELLDVLMKDYKKPEDLIGENGLLKQLTKRLLERAMQTELTEHLGYEKHAPTGKNS CCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GNSRNGGYKKTITGDFGNLDITTPRDRNSTFEPVILPKGETRFTGFDDKIISMYARGMTT CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCC RDIQGHLQEIYGIDVSPTTTVRLIVE HHHHHHHHHHHCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]