Click here to switch to the map view.

The map label for this gene is trg [C]

Identifier: 118578586

GI number: 118578586

Start: 151353

End: 152975

Strand: Direct

Name: trg [C]

Synonym: Ppro_0142

Alternate gene names: 118578586

Gene position: 151353-152975 (Clockwise)

Preceding gene: 118578585

Following gene: 118578588

Centisome position: 3.78

GC content: 44.3

Gene sequence:

>1623_bases
ATGCCGTTCATAAGAAACATTAAGTTGTCGGCCAAGTTTGCTCTTTTCGGGTCAATTATTACTGTATTGCTATTTCTTGC
AACACTGGTTTCCTATCACGGAATGTCAGGTACTACAGAACGTTTTGATCGATTTACGAGCAAGTATCAGGCACTGGCTC
TGGTGTGCAGTGAGATGCATACGCAGGGACTTCAGGCAGAGCAAGCGTGTCGCAACGTTATTTTAAGTCCATCTGATGAG
AAGGCACTATCTAATTATAAAACAGCGTCGGAAAAATTTCTTGAAATGCAAAAGGAAGCGATAGTCATAGCCAAGGGTAT
TGATGACTATGAAAAGCAACTACAGAACATTCCGGCACTCTGGCAGGAAAACGGTGCCGTTAAAGATGAGATTATTAAGC
TTGCAAAGGATGGTATGCAAGCTGAGGCTGTCGAAATATTAATTAAAAAGGAAACTCCAAAATGGCGTGAAATAAAAAAC
CAGATCATCGCGGTGCAGGGCGCCCTGAAAAAGAAAACTGCGGCAGAACATATTGAACTGAAAACTTTTGTAAGTCGCAC
CTTCTATCAAACTATCGCAACTCTTGGAATTGTAATTATAATAATGATTTTACTGTTAATTGTTTTCTGGAAAATCATGC
AAGCGTCTTTCAATAAAACAATTAACCATTTGAATACGCTCGCTTCTGGTGATTTTACGGCAAATTATGAAACTGCGACC
CGGGATGAATTTGGACAACTAATGTCAGCATCAAGAGTAGTGTCTGAAAACATGCATAGCATTATCAGCCAGATATCCAA
TACATCCACACAGATTGCCTCTGCTTCCTCTCAGCTACATGCCACCGCTGAGCGTATCGCTACCGGTTCGGAAGAGGTCG
CTTCACAGGCGTCAACAGTTGCAACAGCCGGTGAAGAAATGTCCGCGACATCCAGTGACATTGCCCATAACTGCCAGATG
GCTGCTGAAGGAGCGCAATGTGCCTCTCAGACTGCCTGCGAAGGTGCAGCGGTGGTACAAAGAACCGTATCTGTTATGGA
GCAAATCGCTGCGAAAGTGCAGGAATCAGCCAAAACAGTGGAAAGTCTGGGTGCCAGAAGCGACCAGATTGGCAATATTA
TCGGTACAATTGAAGACATTGCCGACCAGACCAATTTGCTTGCACTTAATGCAGCTATTGAAGCAGCCCGTGCTGGTGAG
CAGGGACGAGGGTTTGCTGTAGTTGCAGATGAAGTCCGTGCCCTCGCAGAAAGAACCACTCGTGCTACCAAAGAGATTGG
TGAAATGATCAAGGCTATTCAAAAAGAAACCAAAGGTGCTGTTGCGGCTATGGAACAGGGGGTACAACAGGTAGAGTCCG
GCACAGAAGAAGCTGCTAGATCAGGAGAAGCACTTCAGGATATTTTGCAGCAAGTTAATGATGTTGCCATGCAAATTAAC
CAAGTTGCTACAGCAGCTGAAGAGCAAACAGCAACAACCAGCGAAATATCAAGCAATATGCAACAGATTACAGAAGTTGT
ACACCAAACATCGCAAGGAGCAGTTGAATCAGCGACTGCTGCAGCACAACTAAATAAAACTGCTGAAGAGCTGCAACATT
TGGTTCGACAGTTTAAGCTGTAA

Upstream 100 bases:

>100_bases
TATATACATCGAGCTGACCGCTCAATAACGAGTTGGAAAGATAAAAAAATATGGTATAAATTCGGTCAAATTTCGTGAAG
TAAACATGAAGGAGTTTGTT

Downstream 100 bases:

>100_bases
AGAAAGTCGAAGAATAGAAGCGGGGTTCTTGAATATGAAAAACATATGATATCCCAACAAGCCGGTCAGACCGTGACCGG
GGGCATAATGACCGCCCCCG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 539

Protein sequence:

>540_residues
MPFIRNIKLSAKFALFGSIITVLLFLATLVSYHGMSGTTERFDRFTSKYQALALVCSEMHTQGLQAEQACRNVILSPSDE
KALSNYKTASEKFLEMQKEAIVIAKGIDDYEKQLQNIPALWQENGAVKDEIIKLAKDGMQAEAVEILIKKETPKWREIKN
QIIAVQGALKKKTAAEHIELKTFVSRTFYQTIATLGIVIIIMILLLIVFWKIMQASFNKTINHLNTLASGDFTANYETAT
RDEFGQLMSASRVVSENMHSIISQISNTSTQIASASSQLHATAERIATGSEEVASQASTVATAGEEMSATSSDIAHNCQM
AAEGAQCASQTACEGAAVVQRTVSVMEQIAAKVQESAKTVESLGARSDQIGNIIGTIEDIADQTNLLALNAAIEAARAGE
QGRGFAVVADEVRALAERTTRATKEIGEMIKAIQKETKGAVAAMEQGVQQVESGTEEAARSGEALQDILQQVNDVAMQIN
QVATAAEEQTATTSEISSNMQQITEVVHQTSQGAVESATAAAQLNKTAEELQHLVRQFKL

Sequences:

>Translated_540_residues
MPFIRNIKLSAKFALFGSIITVLLFLATLVSYHGMSGTTERFDRFTSKYQALALVCSEMHTQGLQAEQACRNVILSPSDE
KALSNYKTASEKFLEMQKEAIVIAKGIDDYEKQLQNIPALWQENGAVKDEIIKLAKDGMQAEAVEILIKKETPKWREIKN
QIIAVQGALKKKTAAEHIELKTFVSRTFYQTIATLGIVIIIMILLLIVFWKIMQASFNKTINHLNTLASGDFTANYETAT
RDEFGQLMSASRVVSENMHSIISQISNTSTQIASASSQLHATAERIATGSEEVASQASTVATAGEEMSATSSDIAHNCQM
AAEGAQCASQTACEGAAVVQRTVSVMEQIAAKVQESAKTVESLGARSDQIGNIIGTIEDIADQTNLLALNAAIEAARAGE
QGRGFAVVADEVRALAERTTRATKEIGEMIKAIQKETKGAVAAMEQGVQQVESGTEEAARSGEALQDILQQVNDVAMQIN
QVATAAEEQTATTSEISSNMQQITEVVHQTSQGAVESATAAAQLNKTAEELQHLVRQFKL
>Mature_539_residues
PFIRNIKLSAKFALFGSIITVLLFLATLVSYHGMSGTTERFDRFTSKYQALALVCSEMHTQGLQAEQACRNVILSPSDEK
ALSNYKTASEKFLEMQKEAIVIAKGIDDYEKQLQNIPALWQENGAVKDEIIKLAKDGMQAEAVEILIKKETPKWREIKNQ
IIAVQGALKKKTAAEHIELKTFVSRTFYQTIATLGIVIIIMILLLIVFWKIMQASFNKTINHLNTLASGDFTANYETATR
DEFGQLMSASRVVSENMHSIISQISNTSTQIASASSQLHATAERIATGSEEVASQASTVATAGEEMSATSSDIAHNCQMA
AEGAQCASQTACEGAAVVQRTVSVMEQIAAKVQESAKTVESLGARSDQIGNIIGTIEDIADQTNLLALNAAIEAARAGEQ
GRGFAVVADEVRALAERTTRATKEIGEMIKAIQKETKGAVAAMEQGVQQVESGTEEAARSGEALQDILQQVNDVAMQINQ
VATAAEEQTATTSEISSNMQQITEVVHQTSQGAVESATAAAQLNKTAEELQHLVRQFKL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=417, Percent_Identity=29.7362110311751, Blast_Score=148, Evalue=9e-37,
Organism=Escherichia coli, GI2367378, Length=319, Percent_Identity=30.4075235109718, Blast_Score=139, Evalue=6e-34,
Organism=Escherichia coli, GI1788195, Length=308, Percent_Identity=32.1428571428571, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788194, Length=357, Percent_Identity=29.6918767507003, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1789453, Length=291, Percent_Identity=29.553264604811, Blast_Score=109, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58396; Mature: 58265

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFIRNIKLSAKFALFGSIITVLLFLATLVSYHGMSGTTERFDRFTSKYQALALVCSEMH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TQGLQAEQACRNVILSPSDEKALSNYKTASEKFLEMQKEAIVIAKGIDDYEKQLQNIPAL
HCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCHH
WQENGAVKDEIIKLAKDGMQAEAVEILIKKETPKWREIKNQIIAVQGALKKKTAAEHIEL
HHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTFVSRTFYQTIATLGIVIIIMILLLIVFWKIMQASFNKTINHLNTLASGDFTANYETAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
RDEFGQLMSASRVVSENMHSIISQISNTSTQIASASSQLHATAERIATGSEEVASQASTV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ATAGEEMSATSSDIAHNCQMAAEGAQCASQTACEGAAVVQRTVSVMEQIAAKVQESAKTV
HHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLGARSDQIGNIIGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTT
HHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH
RATKEIGEMIKAIQKETKGAVAAMEQGVQQVESGTEEAARSGEALQDILQQVNDVAMQIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHH
QVATAAEEQTATTSEISSNMQQITEVVHQTSQGAVESATAAAQLNKTAEELQHLVRQFKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PFIRNIKLSAKFALFGSIITVLLFLATLVSYHGMSGTTERFDRFTSKYQALALVCSEMH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TQGLQAEQACRNVILSPSDEKALSNYKTASEKFLEMQKEAIVIAKGIDDYEKQLQNIPAL
HCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCHH
WQENGAVKDEIIKLAKDGMQAEAVEILIKKETPKWREIKNQIIAVQGALKKKTAAEHIEL
HHCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTFVSRTFYQTIATLGIVIIIMILLLIVFWKIMQASFNKTINHLNTLASGDFTANYETAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
RDEFGQLMSASRVVSENMHSIISQISNTSTQIASASSQLHATAERIATGSEEVASQASTV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ATAGEEMSATSSDIAHNCQMAAEGAQCASQTACEGAAVVQRTVSVMEQIAAKVQESAKTV
HHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLGARSDQIGNIIGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTT
HHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH
RATKEIGEMIKAIQKETKGAVAAMEQGVQQVESGTEEAARSGEALQDILQQVNDVAMQIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHH
QVATAAEEQTATTSEISSNMQQITEVVHQTSQGAVESATAAAQLNKTAEELQHLVRQFKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA