| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is ynaC [H]
Identifier: 118478596
GI number: 118478596
Start: 3159579
End: 3160331
Strand: Reverse
Name: ynaC [H]
Synonym: BALH_2973
Alternate gene names: 118478596
Gene position: 3160331-3159579 (Counterclockwise)
Preceding gene: 118478597
Following gene: 118478595
Centisome position: 60.12
GC content: 32.27
Gene sequence:
>753_bases TTGACTATGTATGAGCAACTTATAGAGGCACTTAAAGAAAAAATAGGCGATATTTTAACATCTGCAGAGATAAAGGACAG ATTAATAACAAAATTTAATACGAAACCGGGGAGTATTAATCCTGCTGATTATTGTTATAACCGTTATAACAAAGGGAGGG CTGTTAATAAAAATTTATTTATATATATAAACAAAAAAACTTATAGATATGTAGGTGAAAATTATCCTTATACTGGATTA GTTTTTCACAAACCTAAAGGGGCAGAGTGTGAATCTGTTGTAGGTGAGTGGGAAAATGGGAAACTTCTTTTCTATAAGGA GAAGGATAAAATAGGAATCTCACAAATTAAAAAGTTATATGAGGCATACTTTGAAATGTTACGATTTGAAATGAATATTC TTGGTTGTAAGGCGACTGAATTAAGACATCTTATAGGTCGTCTAGGTGAATTTTTTTGTGTCCTTTACACGAATGGTGAG TTATCCAAAGTGACGAATCAGCATGGATATGATGTCATTAAAGATGGACGAAGAATAAGTGTTAAAACAACTGCCCAAGA AAAAGGGTTTATCACGATCAACCAAAACACATTCGACCAATTCGATGACTTCTTCATAGTTCAGTATAAAGATGATGATT TGAAACTATTATTTTATGGGCCAAAGGAAGAGATTCCATCACTTAGACCATATGGGAATACTTATGAGGTTGATATAAAT TCTTTAAAAAGAGTAGAAAAGACACTCCTATAG
Upstream 100 bases:
>100_bases ATAAGGAACTCTAGATATATTATTCTACAATTAGGCCAAATGATAGAGTGAAAGCTTTACTATGTCTAAAACTATTTAGA AACACGAGGAGAGGATTACA
Downstream 100 bases:
>100_bases GGTGTCTTTTTAGCAGAAGTAAGCAGCTCCAACAATGATTCTTCAGCTTTGTAATCGTTATAGGAATCATATGAAACAAA AACTATTAGTGCTCAGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTMYEQLIEALKEKIGDILTSAEIKDRLITKFNTKPGSINPADYCYNRYNKGRAVNKNLFIYINKKTYRYVGENYPYTGL VFHKPKGAECESVVGEWENGKLLFYKEKDKIGISQIKKLYEAYFEMLRFEMNILGCKATELRHLIGRLGEFFCVLYTNGE LSKVTNQHGYDVIKDGRRISVKTTAQEKGFITINQNTFDQFDDFFIVQYKDDDLKLLFYGPKEEIPSLRPYGNTYEVDIN SLKRVEKTLL
Sequences:
>Translated_250_residues MTMYEQLIEALKEKIGDILTSAEIKDRLITKFNTKPGSINPADYCYNRYNKGRAVNKNLFIYINKKTYRYVGENYPYTGL VFHKPKGAECESVVGEWENGKLLFYKEKDKIGISQIKKLYEAYFEMLRFEMNILGCKATELRHLIGRLGEFFCVLYTNGE LSKVTNQHGYDVIKDGRRISVKTTAQEKGFITINQNTFDQFDDFFIVQYKDDDLKLLFYGPKEEIPSLRPYGNTYEVDIN SLKRVEKTLL >Mature_249_residues TMYEQLIEALKEKIGDILTSAEIKDRLITKFNTKPGSINPADYCYNRYNKGRAVNKNLFIYINKKTYRYVGENYPYTGLV FHKPKGAECESVVGEWENGKLLFYKEKDKIGISQIKKLYEAYFEMLRFEMNILGCKATELRHLIGRLGEFFCVLYTNGEL SKVTNQHGYDVIKDGRRISVKTTAQEKGFITINQNTFDQFDDFFIVQYKDDDLKLLFYGPKEEIPSLRPYGNTYEVDINS LKRVEKTLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29204; Mature: 29073
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMYEQLIEALKEKIGDILTSAEIKDRLITKFNTKPGSINPADYCYNRYNKGRAVNKNLF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEECCEEE IYINKKTYRYVGENYPYTGLVFHKPKGAECESVVGEWENGKLLFYKEKDKIGISQIKKLY EEECCCEEEECCCCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHHHH EAYFEMLRFEMNILGCKATELRHLIGRLGEFFCVLYTNGELSKVTNQHGYDVIKDGRRIS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEECCCHHHHHCCCCCHHHCCCCEEE VKTTAQEKGFITINQNTFDQFDDFFIVQYKDDDLKLLFYGPKEEIPSLRPYGNTYEVDIN EEEECCCCCEEEECCCCCCCCCCEEEEEEECCCEEEEEECCHHHCCCCCCCCCEEEEEHH SLKRVEKTLL HHHHHHHHCC >Mature Secondary Structure TMYEQLIEALKEKIGDILTSAEIKDRLITKFNTKPGSINPADYCYNRYNKGRAVNKNLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEECCEEE IYINKKTYRYVGENYPYTGLVFHKPKGAECESVVGEWENGKLLFYKEKDKIGISQIKKLY EEECCCEEEECCCCCCEEEEEEECCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHHHH EAYFEMLRFEMNILGCKATELRHLIGRLGEFFCVLYTNGELSKVTNQHGYDVIKDGRRIS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEECCCHHHHHCCCCCHHHCCCCEEE VKTTAQEKGFITINQNTFDQFDDFFIVQYKDDDLKLLFYGPKEEIPSLRPYGNTYEVDIN EEEECCCCCEEEECCCCCCCCCCEEEEEEECCCEEEEEECCHHHCCCCCCCCCEEEEEHH SLKRVEKTLL HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]