Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is lysC [H]
Identifier: 118477278
GI number: 118477278
Start: 1735459
End: 1736688
Strand: Reverse
Name: lysC [H]
Synonym: BALH_1589
Alternate gene names: 118477278
Gene position: 1736688-1735459 (Counterclockwise)
Preceding gene: 118477282
Following gene: 118477269
Centisome position: 33.04
GC content: 36.83
Gene sequence:
>1230_bases ATGGAAACGATTGTACAAAAATTTGGTGGCACTTCTGTCGGAAGCGTTGAACGCATTCAACATGTAGCAAATTTAATTAT TGAAGAATATGAACGAGGACATAGTATCGTCTCTGTCGTTTCAGCAATGGGGAAAAGTACAGACGAACTTGTAGCACTTG CTAATGCGATTACAGAAAATCCGAGTAAACGCGAAATGGATATGCTTCTATCAACAGGAGAGCAAGTCACTATTTCATTA TTAACGATGGCATTACAAGCAAAAGGTTATAACGCGATTTCATTAACAGGATGGCAAGCTGGTATTACGACAGAATCTGT ACATAGTAGTGCACGGATTACTGACATTCATACAGATCGAATTCAATCTTATCTTACTGAAGGTACGATTGTTATTGTAG CTGGATTCCAAGGAATGAGTGAAAACCATGAAATTACAACACTTGGACGCGGTGGTTCTGATACAACTGCTGTTGCATTA GCTGCTGCACTGAACGCAAAAAAATGTGATATTTACACGGATGTAACAGGCGTATATACAACGGACCCACGAGTTGTAAA AGATGCTTATAAATTAGATGAAATTTCTTATGACGAAATGTTAGAACTTGCAAACCTCGGTGCTGGTGTATTACACCCGC GTGCTGTTGAGTTTGCTAAAAATCATAATGTCATGTTAGAAGTTCGCTCAAGTATGGAACAAGAAAATGGAACAATTGTA AAAGGAGAATGTAACATGGAACAACAATCAATCGTTAAAGGTATTGCATTTGAAGATAATATTACACGCATCACAGTGAA AGGATTGGAACAAGGATCGCTTTCAACTGTTTTCTCTACATTAGCAGCGGCACATATTAATGTAGACATCATCATTCAAA GTATTACAAATGAAGGAACTGTTCATCTCTCCTTCTCCATCCATTCTAATGATTTAAGAGAAACATTAAAAGTGTTGGAA CAAAATCAAGAGGCACTTCACTATGAATCAGTAGAATATGAAAATCATTTAGCAAAAGTATCAATTGTAGGATCTGGTAT GGTCTCTAATCCAGGTGTTGCTGCGAATATGTTCACTACTTTAAAAGAAGAAGATATTCATATTAAAATGGTAAGTACAT CAGAAATTAAAGTGTCTGTCGTTATTGACCGCCTTCATTTAGTAACAGGTGTCGAGGCGCTGCATCAATCATTTATGGCG AAAATTGAGCCTTTAGTGCAACTAATTTAA
Upstream 100 bases:
>100_bases TGAGATGGTGTTTTTTGTTTTTCTCTGGTAACTACAGGAATATTGGGATTTATATATGTCCTAATCTATTCTTAAAAATG GATGAAAGAAGGAATTCGTA
Downstream 100 bases:
>100_bases CATTTTTCTTTAAATTTCATAAAAGTCATATCAACCTATTTGCTTCCTATATAAATAAAAAGCTGTTTGTATAGATTTCA AGACTCTATACAAACAGCTT
Product: aspartate kinase
Products: NA
Alternate protein names: Aspartate kinase 2; Aspartokinase II [H]
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues METIVQKFGGTSVGSVERIQHVANLIIEEYERGHSIVSVVSAMGKSTDELVALANAITENPSKREMDMLLSTGEQVTISL LTMALQAKGYNAISLTGWQAGITTESVHSSARITDIHTDRIQSYLTEGTIVIVAGFQGMSENHEITTLGRGGSDTTAVAL AAALNAKKCDIYTDVTGVYTTDPRVVKDAYKLDEISYDEMLELANLGAGVLHPRAVEFAKNHNVMLEVRSSMEQENGTIV KGECNMEQQSIVKGIAFEDNITRITVKGLEQGSLSTVFSTLAAAHINVDIIIQSITNEGTVHLSFSIHSNDLRETLKVLE QNQEALHYESVEYENHLAKVSIVGSGMVSNPGVAANMFTTLKEEDIHIKMVSTSEIKVSVVIDRLHLVTGVEALHQSFMA KIEPLVQLI
Sequences:
>Translated_409_residues METIVQKFGGTSVGSVERIQHVANLIIEEYERGHSIVSVVSAMGKSTDELVALANAITENPSKREMDMLLSTGEQVTISL LTMALQAKGYNAISLTGWQAGITTESVHSSARITDIHTDRIQSYLTEGTIVIVAGFQGMSENHEITTLGRGGSDTTAVAL AAALNAKKCDIYTDVTGVYTTDPRVVKDAYKLDEISYDEMLELANLGAGVLHPRAVEFAKNHNVMLEVRSSMEQENGTIV KGECNMEQQSIVKGIAFEDNITRITVKGLEQGSLSTVFSTLAAAHINVDIIIQSITNEGTVHLSFSIHSNDLRETLKVLE QNQEALHYESVEYENHLAKVSIVGSGMVSNPGVAANMFTTLKEEDIHIKMVSTSEIKVSVVIDRLHLVTGVEALHQSFMA KIEPLVQLI >Mature_409_residues METIVQKFGGTSVGSVERIQHVANLIIEEYERGHSIVSVVSAMGKSTDELVALANAITENPSKREMDMLLSTGEQVTISL LTMALQAKGYNAISLTGWQAGITTESVHSSARITDIHTDRIQSYLTEGTIVIVAGFQGMSENHEITTLGRGGSDTTAVAL AAALNAKKCDIYTDVTGVYTTDPRVVKDAYKLDEISYDEMLELANLGAGVLHPRAVEFAKNHNVMLEVRSSMEQENGTIV KGECNMEQQSIVKGIAFEDNITRITVKGLEQGSLSTVFSTLAAAHINVDIIIQSITNEGTVHLSFSIHSNDLRETLKVLE QNQEALHYESVEYENHLAKVSIVGSGMVSNPGVAANMFTTLKEEDIHIKMVSTSEIKVSVVIDRLHLVTGVEALHQSFMA KIEPLVQLI
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=342, Percent_Identity=32.1637426900585, Blast_Score=152, Evalue=4e-38, Organism=Escherichia coli, GI1790455, Length=256, Percent_Identity=37.890625, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1790376, Length=279, Percent_Identity=27.9569892473118, Blast_Score=88, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6320893, Length=377, Percent_Identity=27.0557029177719, Blast_Score=119, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 44456; Mature: 44456
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METIVQKFGGTSVGSVERIQHVANLIIEEYERGHSIVSVVSAMGKSTDELVALANAITEN CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCC PSKREMDMLLSTGEQVTISLLTMALQAKGYNAISLTGWQAGITTESVHSSARITDIHTDR CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCEEEECHHHH IQSYLTEGTIVIVAGFQGMSENHEITTLGRGGSDTTAVALAAALNAKKCDIYTDVTGVYT HHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEECCCEEEE TDPRVVKDAYKLDEISYDEMLELANLGAGVLHPRAVEFAKNHNVMLEVRSSMEQENGTIV CCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEHHHHHHCCCCEE KGECNMEQQSIVKGIAFEDNITRITVKGLEQGSLSTVFSTLAAAHINVDIIIQSITNEGT EEECCCCHHHHHHCCEECCCCEEEEEECCCCCCHHHHHHHHHHHHCEEEEEEEEECCCCE VHLSFSIHSNDLRETLKVLEQNQEALHYESVEYENHLAKVSIVGSGMVSNPGVAANMFTT EEEEEEECCHHHHHHHHHHHCCCHHHHHCCCCHHCCEEEEEEEECCCCCCCCCHHHHHHH LKEEDIHIKMVSTSEIKVSVVIDRLHLVTGVEALHQSFMAKIEPLVQLI HCCCCEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure METIVQKFGGTSVGSVERIQHVANLIIEEYERGHSIVSVVSAMGKSTDELVALANAITEN CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCC PSKREMDMLLSTGEQVTISLLTMALQAKGYNAISLTGWQAGITTESVHSSARITDIHTDR CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCEEEECHHHH IQSYLTEGTIVIVAGFQGMSENHEITTLGRGGSDTTAVALAAALNAKKCDIYTDVTGVYT HHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEECCCEEEE TDPRVVKDAYKLDEISYDEMLELANLGAGVLHPRAVEFAKNHNVMLEVRSSMEQENGTIV CCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEHHHHHHCCCCEE KGECNMEQQSIVKGIAFEDNITRITVKGLEQGSLSTVFSTLAAAHINVDIIIQSITNEGT EEECCCCHHHHHHCCEECCCCEEEEEECCCCCCHHHHHHHHHHHHCEEEEEEEEECCCCE VHLSFSIHSNDLRETLKVLEQNQEALHYESVEYENHLAKVSIVGSGMVSNPGVAANMFTT EEEEEEECCHHHHHHHHHHHCCCHHHHHCCCCHHCCEEEEEEEECCCCCCCCCHHHHHHH LKEEDIHIKMVSTSEIKVSVVIDRLHLVTGVEALHQSFMAKIEPLVQLI HCCCCEEEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1444390 [H]