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The map label for this gene is yeeZ [H]

Identifier: 117920020

GI number: 117920020

Start: 1840055

End: 1840912

Strand: Direct

Name: yeeZ [H]

Synonym: Shewana3_1572

Alternate gene names: 117920020

Gene position: 1840055-1840912 (Clockwise)

Preceding gene: 117920019

Following gene: 117920021

Centisome position: 37.01

GC content: 51.05

Gene sequence:

>858_bases
ATGGAAATGGAGCTAAGAGTGGCAGATCAAAAAAGTGTTGCGGTTGTCGGTTGTGGTTGGTTTGGTTTTGCCCTCGCTAA
GCAGTTAGTGCAAGCGGGTTACCGAGTCACTGGTGCTAAACGCCACGCAGAGGAGTTAGCACCTCTCACTGAGGCGGGGA
TCCATGGATTCCAACTGCAACTCGGGGATGAAGCCGATGTACTCCCAGATGCGCAGGCTTTAAAAGCCTTGTTTCAGACA
GACTTTCTTGTCGTCAATATTCCTCCGCGCCTAAAACATGGCAATAGTGCCTATCTTCAAGAATTACAGCAGTTAATTGC
GCTAACCCAGGGCTGGCACTATCAAGGCATAGTGTTTATCAGCACCACAGGCGTTTACCCTTCCCTCGATAAGTCGATGA
CCGAAGCGGATGCGCAGGCGGAATCGGCTTCATCACAGGTGTTATTGGATGCCGAAGCCTTATTTGCTCGCCAGCCGAAT
AGTTGCATTGTACGTTTTGCCGGCTTGGTTGGACCTAAACGTCATCCTGGTCGCTTCTTTGCCGGTAAAACCGATGTGTC
GGGCGGCAATGTTGCGGTCAATCTGGTGCATTTGCAGGACTGCGTGACGGCGGTGAGCTTGATTATTGCTGCAAAGGCGA
AGGGAGAGAAGGTTGCTGCTATCTATAATCTTTGTGCGCCAGAGCATCCTTCCAGAAGTGAATTTTATGTGGCTGCCGCC
GAGTCCTTGGGATTAGTGGCGCCGCAATTTAATGAGCAGGTACAAGCCAGCAAAGTCATTCTAGGAGATGCGATAGTCCG
CGAGCTGGGGTTTGAGTATCAGTTTGTTTCGCCCCTTGCAATGCTGACGGCCTGTTAG

Upstream 100 bases:

>100_bases
TGGATAAAGGCATTAGTTTTTATTTTAGCTCGTTCCAAGCTTGAATCACGCCACCTGAGTTCCGTATGCTATTGGCCGAA
ATACCTTGGGTTGTCGGTCA

Downstream 100 bases:

>100_bases
TGGGTGATTTAGCACCTATTGTTAACAAATGTTTAAGAACCTTAGCCATATTTTGAGGTATCTTAATGGCCTGTGCGTGT
CGCAAACGACTTACGATTAA

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MEMELRVADQKSVAVVGCGWFGFALAKQLVQAGYRVTGAKRHAEELAPLTEAGIHGFQLQLGDEADVLPDAQALKALFQT
DFLVVNIPPRLKHGNSAYLQELQQLIALTQGWHYQGIVFISTTGVYPSLDKSMTEADAQAESASSQVLLDAEALFARQPN
SCIVRFAGLVGPKRHPGRFFAGKTDVSGGNVAVNLVHLQDCVTAVSLIIAAKAKGEKVAAIYNLCAPEHPSRSEFYVAAA
ESLGLVAPQFNEQVQASKVILGDAIVRELGFEYQFVSPLAMLTAC

Sequences:

>Translated_285_residues
MEMELRVADQKSVAVVGCGWFGFALAKQLVQAGYRVTGAKRHAEELAPLTEAGIHGFQLQLGDEADVLPDAQALKALFQT
DFLVVNIPPRLKHGNSAYLQELQQLIALTQGWHYQGIVFISTTGVYPSLDKSMTEADAQAESASSQVLLDAEALFARQPN
SCIVRFAGLVGPKRHPGRFFAGKTDVSGGNVAVNLVHLQDCVTAVSLIIAAKAKGEKVAAIYNLCAPEHPSRSEFYVAAA
ESLGLVAPQFNEQVQASKVILGDAIVRELGFEYQFVSPLAMLTAC
>Mature_285_residues
MEMELRVADQKSVAVVGCGWFGFALAKQLVQAGYRVTGAKRHAEELAPLTEAGIHGFQLQLGDEADVLPDAQALKALFQT
DFLVVNIPPRLKHGNSAYLQELQQLIALTQGWHYQGIVFISTTGVYPSLDKSMTEADAQAESASSQVLLDAEALFARQPN
SCIVRFAGLVGPKRHPGRFFAGKTDVSGGNVAVNLVHLQDCVTAVSLIIAAKAKGEKVAAIYNLCAPEHPSRSEFYVAAA
ESLGLVAPQFNEQVQASKVILGDAIVRELGFEYQFVSPLAMLTAC

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788327, Length=277, Percent_Identity=39.7111913357401, Blast_Score=172, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 30613; Mature: 30613

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS00047 HISTONE_H4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMELRVADQKSVAVVGCGWFGFALAKQLVQAGYRVTGAKRHAEELAPLTEAGIHGFQLQ
CCCEEEECCCCCEEEEECCHHHHHHHHHHHHCCCEECCHHHHHHHHCCHHHHCCCEEEEE
LGDEADVLPDAQALKALFQTDFLVVNIPPRLKHGNSAYLQELQQLIALTQGWHYQGIVFI
ECCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
STTGVYPSLDKSMTEADAQAESASSQVLLDAEALFARQPNSCIVRFAGLVGPKRHPGRFF
EECCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHHHHHHHHCCCCCCCCCEE
AGKTDVSGGNVAVNLVHLQDCVTAVSLIIAAKAKGEKVAAIYNLCAPEHPSRSEFYVAAA
CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCEEEEEH
ESLGLVAPQFNEQVQASKVILGDAIVRELGFEYQFVSPLAMLTAC
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCC
>Mature Secondary Structure
MEMELRVADQKSVAVVGCGWFGFALAKQLVQAGYRVTGAKRHAEELAPLTEAGIHGFQLQ
CCCEEEECCCCCEEEEECCHHHHHHHHHHHHCCCEECCHHHHHHHHCCHHHHCCCEEEEE
LGDEADVLPDAQALKALFQTDFLVVNIPPRLKHGNSAYLQELQQLIALTQGWHYQGIVFI
ECCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
STTGVYPSLDKSMTEADAQAESASSQVLLDAEALFARQPNSCIVRFAGLVGPKRHPGRFF
EECCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHHHHHHHHCCCCCCCCCEE
AGKTDVSGGNVAVNLVHLQDCVTAVSLIIAAKAKGEKVAAIYNLCAPEHPSRSEFYVAAA
CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCCEEEEEH
ESLGLVAPQFNEQVQASKVILGDAIVRELGFEYQFVSPLAMLTAC
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]