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The map label for this gene is etfB [H]

Identifier: 117919853

GI number: 117919853

Start: 1622695

End: 1623444

Strand: Direct

Name: etfB [H]

Synonym: Shewana3_1405

Alternate gene names: 117919853

Gene position: 1622695-1623444 (Clockwise)

Preceding gene: 117919840

Following gene: 117919854

Centisome position: 32.64

GC content: 46.4

Gene sequence:

>750_bases
ATGAAAGTATTGGTGCCTGTTAAGCGCGTAGTTGATGCCAATGTGAAGGTCAGGGTAAAAGCTGACAACACCAGCGTTGA
TACCGCAAACCTCAAAATGGCGTTGAACCCTTTTTGTGAAATTGCAGTAGAAGAAGCGGTTCGTTTAAAAGAAGCGGGCA
GTGCTACTGAAGTAGTGGTCGTCAGTATCGGCAATAAAGCCGTTCAAGAACAATTGCGTACCGCGTTAGCACTAGGTGCT
GACCGTGCGATTCACATTGATACTGAAGAAGAGTTAACCCCAGTATCGATTGCCAAATTACTCAAAGCCGTACAAGAAAA
AGAACAAGCGCAATTAGTGCTGTTTGGTAAGCAATCTATCGATGGCGATAATAACCAAACTGGCCAAATGTTTGCGGCAT
TAACGGATATGCCACAAGCCACTTTTGCTTCTGAAATCAAAGTCGAAGGTCATTCAGTGCAAGTGGCTCGCGAGATAGAT
GGCGGGATGCAAACCTTAAGTCTGCCGCTGCCAGCTGTGGTGACTGCCGATTTACGTTTGAACGAACCTCGTTACGCTTC
ATTGCCTAACATCATGAAAGCTAAACGTAAGCCATTAGATGTGCTCACTGTTGCGGATTTAGGTGTGACGCTAAAAGCCC
ATCAAACTGTGGTGAAGGTGACGCCACCTGCCGAACGTAAGGCGGGCATCATGGTTGCGTCGGTAGCTGAGCTGGTTGAA
AAGTTAAAGAATGAAGCGAAGGTGATCTAA

Upstream 100 bases:

>100_bases
TGGTTGACGTTAACGTTAACAGGACGTAAAGTGGCTCTATCCTGCATTGGTGATGACCAATGTTTTGTCCATGTACATGA
AATTGTAGGAAGGAAACCCT

Downstream 100 bases:

>100_bases
ATGGCCATTTTAGTATTAGCAGAACACGATAATGCGGCACTGAAACTGGATACCGCAAAGGTTGTCACCGCTGCGTGTGC
CATTGGTGATGATGTGCATG

Product: electron transfer flavoprotein beta-subunit

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKVLVPVKRVVDANVKVRVKADNTSVDTANLKMALNPFCEIAVEEAVRLKEAGSATEVVVVSIGNKAVQEQLRTALALGA
DRAIHIDTEEELTPVSIAKLLKAVQEKEQAQLVLFGKQSIDGDNNQTGQMFAALTDMPQATFASEIKVEGHSVQVAREID
GGMQTLSLPLPAVVTADLRLNEPRYASLPNIMKAKRKPLDVLTVADLGVTLKAHQTVVKVTPPAERKAGIMVASVAELVE
KLKNEAKVI

Sequences:

>Translated_249_residues
MKVLVPVKRVVDANVKVRVKADNTSVDTANLKMALNPFCEIAVEEAVRLKEAGSATEVVVVSIGNKAVQEQLRTALALGA
DRAIHIDTEEELTPVSIAKLLKAVQEKEQAQLVLFGKQSIDGDNNQTGQMFAALTDMPQATFASEIKVEGHSVQVAREID
GGMQTLSLPLPAVVTADLRLNEPRYASLPNIMKAKRKPLDVLTVADLGVTLKAHQTVVKVTPPAERKAGIMVASVAELVE
KLKNEAKVI
>Mature_249_residues
MKVLVPVKRVVDANVKVRVKADNTSVDTANLKMALNPFCEIAVEEAVRLKEAGSATEVVVVSIGNKAVQEQLRTALALGA
DRAIHIDTEEELTPVSIAKLLKAVQEKEQAQLVLFGKQSIDGDNNQTGQMFAALTDMPQATFASEIKVEGHSVQVAREID
GGMQTLSLPLPAVVTADLRLNEPRYASLPNIMKAKRKPLDVLTVADLGVTLKAHQTVVKVTPPAERKAGIMVASVAELVE
KLKNEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=252, Percent_Identity=55.1587301587302, Blast_Score=274, Evalue=5e-74,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=54.4303797468354, Blast_Score=256, Evalue=2e-68,
Organism=Escherichia coli, GI87081682, Length=232, Percent_Identity=28.448275862069, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI2367123, Length=254, Percent_Identity=25.1968503937008, Blast_Score=62, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=48.2213438735178, Blast_Score=221, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=45.6, Blast_Score=204, Evalue=9e-54,
Organism=Drosophila melanogaster, GI24651147, Length=251, Percent_Identity=51.394422310757, Blast_Score=223, Evalue=8e-59,
Organism=Drosophila melanogaster, GI24651145, Length=251, Percent_Identity=51.394422310757, Blast_Score=223, Evalue=8e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26772; Mature: 26772

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVPVKRVVDANVKVRVKADNTSVDTANLKMALNPFCEIAVEEAVRLKEAGSATEVVV
CCEEECCHHHHCCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEE
VSIGNKAVQEQLRTALALGADRAIHIDTEEELTPVSIAKLLKAVQEKEQAQLVLFGKQSI
EECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
DGDNNQTGQMFAALTDMPQATFASEIKVEGHSVQVAREIDGGMQTLSLPLPAVVTADLRL
CCCCCCCHHHHHHHHCCCCHHHHHHEEECCCEEEEEEHHCCCCEEECCCCCEEEEECEEE
NEPRYASLPNIMKAKRKPLDVLTVADLGVTLKAHQTVVKVTPPAERKAGIMVASVAELVE
CCCCCCCCCHHHHHCCCCCEEEEEECCCEEEEECCEEEEECCCCCHHCCCHHHHHHHHHH
KLKNEAKVI
HHHHHCCCC
>Mature Secondary Structure
MKVLVPVKRVVDANVKVRVKADNTSVDTANLKMALNPFCEIAVEEAVRLKEAGSATEVVV
CCEEECCHHHHCCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEE
VSIGNKAVQEQLRTALALGADRAIHIDTEEELTPVSIAKLLKAVQEKEQAQLVLFGKQSI
EECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
DGDNNQTGQMFAALTDMPQATFASEIKVEGHSVQVAREIDGGMQTLSLPLPAVVTADLRL
CCCCCCCHHHHHHHHCCCCHHHHHHEEECCCEEEEEEHHCCCCEEECCCCCEEEEECEEE
NEPRYASLPNIMKAKRKPLDVLTVADLGVTLKAHQTVVKVTPPAERKAGIMVASVAELVE
CCCCCCCCCHHHHHCCCCCEEEEEECCCEEEEECCEEEEECCCCCHHCCCHHHHHHHHHH
KLKNEAKVI
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]