Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is kinB [H]
Identifier: 117919838
GI number: 117919838
Start: 1604737
End: 1606098
Strand: Direct
Name: kinB [H]
Synonym: Shewana3_1390
Alternate gene names: 117919838
Gene position: 1604737-1606098 (Clockwise)
Preceding gene: 117919835
Following gene: 117919839
Centisome position: 32.27
GC content: 44.13
Gene sequence:
>1362_bases ATGACACGTATGTTAGACAGGATTTTATTCGATGTAAGCCGTTCATCCATTATTGATGGTGGCGATCTTGTTGAGGCCTC ACAACTTATCGTGACATCTGTGTGCCAAGGGTTAAAAATCACCCGTGCTGGCATTTGGTTATGGAGTGAAGATCACCAAA GTATGCATTGCTTTTACCTGCTCGATAATATGCACAGGCAAGAGGCGTTGATATTAACTCGGCAGGATTATCCACATTAT TTCAGTCTATTAGATAATGAGCGCGCTATTGTCGCGAATCATGCGCAAACAGATGGGGCGACCCATGAGTTTGTTAGTGC CTACTTAGTCCCTAATCGTATTAGTTCTCTGTTAGATAGTCCCATACGTCATCGCGGAAAAATGGTCGGCATTATCTGCT CCGAGCATCAAGGTGTGCCTCGAGAATGGACGCGTGACGAAAGAGCCTTTGCTTCTGCTTTGGCCGATTTATTCGGCCGA GCGATGAGCGCAAAGGAAATTTTGGATTATCAGCATCAATTAAAGGCTATTAATGCGGATTTGGAGGTCCAGGTTGAGCA GCGAACGCAAGAACTTGAAACTGCATTATCGGATTTACGCTCAATACAACACCATTTAGTTGAAAACGAGAAAATGGCGG CTTTAGGAAGTTTGGTTGCAGGGGTTGCGCACGAGGTCAATACGCCTCTAGGGATTGCCGTGACATCCGTAACCCATTGT TTAGATGAAGTGGCACTGCTGAAAACGGCTTTTGAGCAAAACGAGTTGGATGAGGATAAATTTTTATCCTTTATCAATAC CATGCAGGATGGTTTAGGGTTGATTGAGCGCAATCTTTCGCGAGCAGCGGAGTTAGTCCATAACTTTAAGCGCACCGCCG CAGACCAATCGGTGCTAGAACGTGAGCGGTTTAATTTAAAGACCTATATTTTCCAAATTTTCAGCTCATTAAGGCCGCTA ATGCGTAAGAAGAATATTGTCTTGAACGTGGAGCTTGATGACGACATCTTTATCGAATCTTACCCTGGTGCCATCGCACA GATTTTCACTAATTTAGTGGCCAATAGCTTTCGCCATGGATTTCCTGAGAGTTTTACGGGGGATAAAAGCATCACTATTC GAGTACAAAAACAAGACTCGAACATTTGTATGCAGTATCAAGATAATGGGGTAGGGATGAGCGATGAGGTTAAACTGAAA GCCTTCGAGCCTTTTTTCACTACCGCACGTAAAGACGGCGGCACAGGTCTTGGTATGTCTATTATTTATAATCTGGTGAC GCAAAAACTTCATGGCACCATTTTGCTAGCCTCATCCCCAGATCAAGGTGTGAAGGTCGAAATACAGATCCCTGAGAAAT AA
Upstream 100 bases:
>100_bases CAGATTGAATCTATACTAAAGAGAACCACTTAAGCTTAGGTCACCAAGTTTATTGCCTCATTTTTAAGTCAGGCGGTACC ACGCGGGGTAAATCTGCATT
Downstream 100 bases:
>100_bases GCTTAGATATTGTTTAGGCGACAATGCGATCTTGTTGAAGACCTCGTGCCATTCAGCTTTATCGGCATTTATATGCTACA ATCATCCCTTCACTTTGACT
Product: GAF sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MTRMLDRILFDVSRSSIIDGGDLVEASQLIVTSVCQGLKITRAGIWLWSEDHQSMHCFYLLDNMHRQEALILTRQDYPHY FSLLDNERAIVANHAQTDGATHEFVSAYLVPNRISSLLDSPIRHRGKMVGIICSEHQGVPREWTRDERAFASALADLFGR AMSAKEILDYQHQLKAINADLEVQVEQRTQELETALSDLRSIQHHLVENEKMAALGSLVAGVAHEVNTPLGIAVTSVTHC LDEVALLKTAFEQNELDEDKFLSFINTMQDGLGLIERNLSRAAELVHNFKRTAADQSVLERERFNLKTYIFQIFSSLRPL MRKKNIVLNVELDDDIFIESYPGAIAQIFTNLVANSFRHGFPESFTGDKSITIRVQKQDSNICMQYQDNGVGMSDEVKLK AFEPFFTTARKDGGTGLGMSIIYNLVTQKLHGTILLASSPDQGVKVEIQIPEK
Sequences:
>Translated_453_residues MTRMLDRILFDVSRSSIIDGGDLVEASQLIVTSVCQGLKITRAGIWLWSEDHQSMHCFYLLDNMHRQEALILTRQDYPHY FSLLDNERAIVANHAQTDGATHEFVSAYLVPNRISSLLDSPIRHRGKMVGIICSEHQGVPREWTRDERAFASALADLFGR AMSAKEILDYQHQLKAINADLEVQVEQRTQELETALSDLRSIQHHLVENEKMAALGSLVAGVAHEVNTPLGIAVTSVTHC LDEVALLKTAFEQNELDEDKFLSFINTMQDGLGLIERNLSRAAELVHNFKRTAADQSVLERERFNLKTYIFQIFSSLRPL MRKKNIVLNVELDDDIFIESYPGAIAQIFTNLVANSFRHGFPESFTGDKSITIRVQKQDSNICMQYQDNGVGMSDEVKLK AFEPFFTTARKDGGTGLGMSIIYNLVTQKLHGTILLASSPDQGVKVEIQIPEK >Mature_452_residues TRMLDRILFDVSRSSIIDGGDLVEASQLIVTSVCQGLKITRAGIWLWSEDHQSMHCFYLLDNMHRQEALILTRQDYPHYF SLLDNERAIVANHAQTDGATHEFVSAYLVPNRISSLLDSPIRHRGKMVGIICSEHQGVPREWTRDERAFASALADLFGRA MSAKEILDYQHQLKAINADLEVQVEQRTQELETALSDLRSIQHHLVENEKMAALGSLVAGVAHEVNTPLGIAVTSVTHCL DEVALLKTAFEQNELDEDKFLSFINTMQDGLGLIERNLSRAAELVHNFKRTAADQSVLERERFNLKTYIFQIFSSLRPLM RKKNIVLNVELDDDIFIESYPGAIAQIFTNLVANSFRHGFPESFTGDKSITIRVQKQDSNICMQYQDNGVGMSDEVKLKA FEPFFTTARKDGGTGLGMSIIYNLVTQKLHGTILLASSPDQGVKVEIQIPEK
Specific function: Phosphorylates the sporulation-regulatory proteins spo0A and spo0F. Spo0F is required for the kinB activity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=299, Percent_Identity=23.7458193979933, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1789149, Length=292, Percent_Identity=27.3972602739726, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI145693157, Length=276, Percent_Identity=23.5507246376812, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI87081816, Length=303, Percent_Identity=24.7524752475248, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1790436, Length=255, Percent_Identity=24.7058823529412, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 50994; Mature: 50863
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRMLDRILFDVSRSSIIDGGDLVEASQLIVTSVCQGLKITRAGIWLWSEDHQSMHCFYL CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEEE LDNMHRQEALILTRQDYPHYFSLLDNERAIVANHAQTDGATHEFVSAYLVPNRISSLLDS EHHCCCCCEEEEEECCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC PIRHRGKMVGIICSEHQGVPREWTRDERAFASALADLFGRAMSAKEILDYQHQLKAINAD HHHHCCCEEEEEECCCCCCCCHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC LEVQVEQRTQELETALSDLRSIQHHLVENEKMAALGSLVAGVAHEVNTPLGIAVTSVTHC CEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LDEVALLKTAFEQNELDEDKFLSFINTMQDGLGLIERNLSRAAELVHNFKRTAADQSVLE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RERFNLKTYIFQIFSSLRPLMRKKNIVLNVELDDDIFIESYPGAIAQIFTNLVANSFRHG HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHCC FPESFTGDKSITIRVQKQDSNICMQYQDNGVGMSDEVKLKAFEPFFTTARKDGGTGLGMS CCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEECHHHHHHCCCCCCCHHHH IIYNLVTQKLHGTILLASSPDQGVKVEIQIPEK HHHHHHHHHHCCEEEEECCCCCCEEEEEECCCC >Mature Secondary Structure TRMLDRILFDVSRSSIIDGGDLVEASQLIVTSVCQGLKITRAGIWLWSEDHQSMHCFYL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEEE LDNMHRQEALILTRQDYPHYFSLLDNERAIVANHAQTDGATHEFVSAYLVPNRISSLLDS EHHCCCCCEEEEEECCCCHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC PIRHRGKMVGIICSEHQGVPREWTRDERAFASALADLFGRAMSAKEILDYQHQLKAINAD HHHHCCCEEEEEECCCCCCCCHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC LEVQVEQRTQELETALSDLRSIQHHLVENEKMAALGSLVAGVAHEVNTPLGIAVTSVTHC CEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LDEVALLKTAFEQNELDEDKFLSFINTMQDGLGLIERNLSRAAELVHNFKRTAADQSVLE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RERFNLKTYIFQIFSSLRPLMRKKNIVLNVELDDDIFIESYPGAIAQIFTNLVANSFRHG HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHCC FPESFTGDKSITIRVQKQDSNICMQYQDNGVGMSDEVKLKAFEPFFTTARKDGGTGLGMS CCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEECHHHHHHCCCCCCCHHHH IIYNLVTQKLHGTILLASSPDQGVKVEIQIPEK HHHHHHHHHHCCEEEEECCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8497199; 9274030; 9384377 [H]