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The map label for this gene is ugd [H]

Identifier: 117919835

GI number: 117919835

Start: 1601734

End: 1602900

Strand: Direct

Name: ugd [H]

Synonym: Shewana3_1387

Alternate gene names: 117919835

Gene position: 1601734-1602900 (Clockwise)

Preceding gene: 117919834

Following gene: 117919838

Centisome position: 32.21

GC content: 36.16

Gene sequence:

>1167_bases
ATGAAGATTGCTATAGCCGGTACAGGTTATGTAGGTTTATCAAATTCTGTACTCTTAGCGCAGAATCATAAAGTGACCGC
AGTCGATGTTGTTGATTATAAAGTTGAATTAATTAATAATCGTAAGTCTCCGATTGTTGATGCTGAAATTGAATATTTTT
TAGCTAATTATGAACTTGATTTAACTGCGACTTTAGATAGACAACTTGCATATCAAGATGCTGACTTTGTTATTATTGCC
ACACCAACAGATTATGATCCAAAGACTAATTATTTTAATACTTCATCTGTTGAATCTGTTATTCAAGATGTTTTAATGAT
TAATCCGAATGCTGTTATGGTGATTAAGTCTACGGTTCCTGTTGGGTTTACCGCTAAAGTTAAACAAAAATACAATTGTG
ATAATATTCTTTTTTCACCTGAGTTTTTGCGCGAGGGTAAGGCACTTTATGATAATTTGCACCCATCACGTATCATTGTT
GGTGAACGCTCAGAACGCGCTGAAGTTTTTGCAAATTTATTAGTGCAAGGTGCGATTAAACAAGATATTCAAGTGTTATT
TACTGATTCTATTGAAGCTGAAGCGGTTAAATTATTCTCTAATACATATCTCGCGATGCGTGTTGCTTACTTTAATGAGC
TTGATACTTACGCTGAAGCCCATGGTTTAAACACTCGTCAAATTATCGAGGGTGTATGTTTAGATCCTCGTATTGGAAAT
CATTACAATAATCCGTCGTTTGGGTATGGTGGTTATTGTTTGCCTAAAGATACCAAGCAACTTAGAGCCAATTACGCCGA
TGTACCTAATAGTATTATTGGCGCGATTGTTGAGTCGAACACTACGCGTAAAGATTTTATCGCGGATTCTATTTTAAGTC
GTAATCCTAAAGTTGTCGGCATTTATCGACTGATCATGAAGGCTGGTTCCGATAATTTTAGAGCTTCGAGCATTCAAGGC
ATAATGAAGCGTATTAAGGCTAAGGGGATTGAAGTTGTCATTTATGAACCCGTTTTAAATGAGTCGGAGTTTTTCCACTC
GAGGGTTATAACTGACCTTGCTGAATTTAAAGCGAAAGCGGATGTGATTGTTTCTAATCGTATGGCTAATGAACTCGCAG
ATGTTGCTGATAAACTATATACACGCGATTTATTTGGTAGTGATTAA

Upstream 100 bases:

>100_bases
TAAATGGGCAGGCTTTTTAGGTGAGCAGAATAATGTTTTTTATTATTCTGAATTTTAGTTAGTGTCAAGAGATATTTGTT
TTTTTGGGGAGTTAGATGCT

Downstream 100 bases:

>100_bases
CAATTATTTCATTTGCTATCTTATTTAAAGGCCGGAGTGTATTCGGCTTTTTATGAGTTTTTTTCTACGCCTCTTTTGGG
TATCAGTTTTGCAATCGGTG

Product: UDP-glucose/GDP-mannose dehydrogenase

Products: NA

Alternate protein names: UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH [H]

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKIAIAGTGYVGLSNSVLLAQNHKVTAVDVVDYKVELINNRKSPIVDAEIEYFLANYELDLTATLDRQLAYQDADFVIIA
TPTDYDPKTNYFNTSSVESVIQDVLMINPNAVMVIKSTVPVGFTAKVKQKYNCDNILFSPEFLREGKALYDNLHPSRIIV
GERSERAEVFANLLVQGAIKQDIQVLFTDSIEAEAVKLFSNTYLAMRVAYFNELDTYAEAHGLNTRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFIADSILSRNPKVVGIYRLIMKAGSDNFRASSIQG
IMKRIKAKGIEVVIYEPVLNESEFFHSRVITDLAEFKAKADVIVSNRMANELADVADKLYTRDLFGSD

Sequences:

>Translated_388_residues
MKIAIAGTGYVGLSNSVLLAQNHKVTAVDVVDYKVELINNRKSPIVDAEIEYFLANYELDLTATLDRQLAYQDADFVIIA
TPTDYDPKTNYFNTSSVESVIQDVLMINPNAVMVIKSTVPVGFTAKVKQKYNCDNILFSPEFLREGKALYDNLHPSRIIV
GERSERAEVFANLLVQGAIKQDIQVLFTDSIEAEAVKLFSNTYLAMRVAYFNELDTYAEAHGLNTRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFIADSILSRNPKVVGIYRLIMKAGSDNFRASSIQG
IMKRIKAKGIEVVIYEPVLNESEFFHSRVITDLAEFKAKADVIVSNRMANELADVADKLYTRDLFGSD
>Mature_388_residues
MKIAIAGTGYVGLSNSVLLAQNHKVTAVDVVDYKVELINNRKSPIVDAEIEYFLANYELDLTATLDRQLAYQDADFVIIA
TPTDYDPKTNYFNTSSVESVIQDVLMINPNAVMVIKSTVPVGFTAKVKQKYNCDNILFSPEFLREGKALYDNLHPSRIIV
GERSERAEVFANLLVQGAIKQDIQVLFTDSIEAEAVKLFSNTYLAMRVAYFNELDTYAEAHGLNTRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFIADSILSRNPKVVGIYRLIMKAGSDNFRASSIQG
IMKRIKAKGIEVVIYEPVLNESEFFHSRVITDLAEFKAKADVIVSNRMANELADVADKLYTRDLFGSD

Specific function: Unknown

COG id: COG1004

COG function: function code M; Predicted UDP-glucose 6-dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507813, Length=366, Percent_Identity=25.4098360655738, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI296040438, Length=252, Percent_Identity=26.984126984127, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI296040443, Length=216, Percent_Identity=27.7777777777778, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI1788340, Length=388, Percent_Identity=76.2886597938144, Blast_Score=623, Evalue=1e-180,
Organism=Escherichia coli, GI48994968, Length=406, Percent_Identity=24.1379310344828, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17560350, Length=400, Percent_Identity=27.5, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI17136908, Length=278, Percent_Identity=29.8561151079137, Blast_Score=102, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR016040
- InterPro:   IPR017476
- InterPro:   IPR014027
- InterPro:   IPR014026
- InterPro:   IPR014028
- InterPro:   IPR001732 [H]

Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]

EC number: =1.1.1.22 [H]

Molecular weight: Translated: 43289; Mature: 43289

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAIAGTGYVGLSNSVLLAQNHKVTAVDVVDYKVELINNRKSPIVDAEIEYFLANYELD
CEEEEEECCCEECCCCEEEECCCCEEEEEEEEEEEEEECCCCCCEEEHEEEEEEEEEEEE
LTATLDRQLAYQDADFVIIATPTDYDPKTNYFNTSSVESVIQDVLMINPNAVMVIKSTVP
EEEEHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEECCCEEEEEEECCC
VGFTAKVKQKYNCDNILFSPEFLREGKALYDNLHPSRIIVGERSERAEVFANLLVQGAIK
CCEEEHHHHCCCCCCEEECHHHHHCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHH
QDIQVLFTDSIEAEAVKLFSNTYLAMRVAYFNELDTYAEAHGLNTRQIIEGVCLDPRIGN
HCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC
HYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFIADSILSRNPKVVG
CCCCCCCCCCCEECCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEH
IYRLIMKAGSDNFRASSIQGIMKRIKAKGIEVVIYEPVLNESEFFHSRVITDLAEFKAKA
HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
DVIVSNRMANELADVADKLYTRDLFGSD
HHEEHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKIAIAGTGYVGLSNSVLLAQNHKVTAVDVVDYKVELINNRKSPIVDAEIEYFLANYELD
CEEEEEECCCEECCCCEEEECCCCEEEEEEEEEEEEEECCCCCCEEEHEEEEEEEEEEEE
LTATLDRQLAYQDADFVIIATPTDYDPKTNYFNTSSVESVIQDVLMINPNAVMVIKSTVP
EEEEHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHEECCCEEEEEEECCC
VGFTAKVKQKYNCDNILFSPEFLREGKALYDNLHPSRIIVGERSERAEVFANLLVQGAIK
CCEEEHHHHCCCCCCEEECHHHHHCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHH
QDIQVLFTDSIEAEAVKLFSNTYLAMRVAYFNELDTYAEAHGLNTRQIIEGVCLDPRIGN
HCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCC
HYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFIADSILSRNPKVVG
CCCCCCCCCCCEECCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEH
IYRLIMKAGSDNFRASSIQGIMKRIKAKGIEVVIYEPVLNESEFFHSRVITDLAEFKAKA
HHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
DVIVSNRMANELADVADKLYTRDLFGSD
HHEEHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9383197 [H]