Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is ylxH [H]

Identifier: 117919806

GI number: 117919806

Start: 1571350

End: 1572231

Strand: Direct

Name: ylxH [H]

Synonym: Shewana3_1358

Alternate gene names: 117919806

Gene position: 1571350-1572231 (Clockwise)

Preceding gene: 117919805

Following gene: 117919807

Centisome position: 31.6

GC content: 47.62

Gene sequence:

>882_bases
ATGACCCTGGATCAAGCAAGTGGTTTACGTATGATGAATCAACCCTATAACGAAAAAGTGAAAGTAATCGCGGTTACGGG
TGGTAAAGGTGGCGTGGGTAAAACCAGCGTGTCTATCAATACCGCAGTAGCATTAGCCGAAAAGGGCAAGCGTGTCTTAG
TGCTTGATGCCGACTTAGGCTTAGCAAACGTCGATGTCATGTTAGGGATCCGTGCTGAACGTAACCTTTCCCACGTACTC
TCTGGCGATGCTGAGCTGGATGATATTATCGTCCGAGGACCTAAGGGCATAGGCATTGTCCCTGCGACCTCAGGAACTCA
AGGCATGGTAGAGTTGAGCCCTGCGCAACATGCGGGCTTAATTCGTGCTTTTAGTGAGATGCGTACCCAGTTTGATATCC
TCATCGTGGATACTGCCGCGGGGATTTCTGACATGGTACTCAGTTTCTCCCGTGCCTCACAGGATGTGTTGGTGGTTGTT
TGTGACGAGCCAACTTCTATCACTGACGCCTATGCGTTAATCAAAATTCTCAGCCGTGAACACGGCGTTTTCCGCTTTAA
AATTGTTGCTAATATGGTGCGCAGTTTGCGCGAAGGTATGGAATTGTTTGCTAAACTCAGTAAAGTGACCGACAGATTCT
TGGACGTGGCACTCGAACTGGTTGCGACCATTCCGTTTGATGAAAACCTTCGCAAATCAGTGCGTAAACAAAAGTTAGTG
GTTGAGGCTTATCCTAAGTCTCCTGCTGCGATTGCGTACCATGGCTTAGCGAATAAAATCATGAGCTGGCCAGTACCACA
GCAACCTGGTGGGCATTTGGAGTTTTTCGTTGAGCGTTTAGTTCAGCGACCAGATTTTCAAGAGGAAAAAACGAGTGAAT
AA

Upstream 100 bases:

>100_bases
CTCGCAGAGCAGGCGTTAGCGGCCTTAGAAAACACTGAACAACAATCGTTACCAGACACAGCGTGGTCAGATAATATGAC
CTGTGCATTTGAGTAGAGTT

Downstream 100 bases:

>100_bases
AGCCGCAGCGTATACTTGTTTAGACAGTAAAACGTCAATCGTTGAACAGTATGCACCGTTGGTTAAAAGAATTGCACATC
ACTTGCTCGCCAGATTACCT

Product: cobyrinic acid a,c-diamide synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGIRAERNLSHVL
SGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQDVLVVV
CDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV
VEAYPKSPAAIAYHGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE

Sequences:

>Translated_293_residues
MTLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGIRAERNLSHVL
SGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQDVLVVV
CDEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV
VEAYPKSPAAIAYHGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE
>Mature_292_residues
TLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLGLANVDVMLGIRAERNLSHVLS
GDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGLIRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQDVLVVVC
DEPTSITDAYALIKILSREHGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLVV
EAYPKSPAAIAYHGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE

Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest

COG id: COG0455

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787423, Length=163, Percent_Identity=30.6748466257669, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082045, Length=267, Percent_Identity=25.8426966292135, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 31900; Mature: 31769

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLG
CCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCC
LANVDVMLGIRAERNLSHVLSGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGL
EECEEEEEEECCCCCHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCEEEECCHHHHHH
IRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQDVLVVVCDEPTSITDAYALIKILSRE
HHHHHHHCCEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCC
HGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEE
VEAYPKSPAAIAYHGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE
EEECCCCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TLDQASGLRMMNQPYNEKVKVIAVTGGKGGVGKTSVSINTAVALAEKGKRVLVLDADLG
CCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCC
LANVDVMLGIRAERNLSHVLSGDAELDDIIVRGPKGIGIVPATSGTQGMVELSPAQHAGL
EECEEEEEEECCCCCHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCCEEEECCHHHHHH
IRAFSEMRTQFDILIVDTAAGISDMVLSFSRASQDVLVVVCDEPTSITDAYALIKILSRE
HHHHHHHCCEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCC
HGVFRFKIVANMVRSLREGMELFAKLSKVTDRFLDVALELVATIPFDENLRKSVRKQKLV
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEE
VEAYPKSPAAIAYHGLANKIMSWPVPQQPGGHLEFFVERLVQRPDFQEEKTSE
EEECCCCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7987014; 9384377 [H]