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The map label for this gene is yqgE [C]

Identifier: 117919649

GI number: 117919649

Start: 1406415

End: 1406978

Strand: Reverse

Name: yqgE [C]

Synonym: Shewana3_1200

Alternate gene names: 117919649

Gene position: 1406978-1406415 (Counterclockwise)

Preceding gene: 117919650

Following gene: 117919648

Centisome position: 28.3

GC content: 51.77

Gene sequence:

>564_bases
ATGGAGAGTTTGCAGAACCATTTTTTAATCGCCATGCCGTCGCTCGATGACACTTTTTTTGAACGCACCGTCATCTATCT
ATGCGAACACGATGAAAAAGGCGCCATGGGGCTCGTGATTAATAAACCATTGGGCATTGAAGTGAACTCATTGCTCGAAC
AGATGGATTTGCCCGCTGAGCAAGTGTCGACCGACCTCGCATTAGGCGCGCAGGTTTTAATGGGCGGCCCCGTGTCCCAA
GATAGAGGCTTTGTCTTGCATACATCCCAGCCCTATTGGGCCAACAGTACAGAATTAAGCTCTGGCCTCATGCTCACCAC
CTCAAGGGATGTATTAACGGCGATTGGCAGCGAGCGCTCGCCAGAAAAATTTATCGTGGCATTAGGTTATGCGGGTTGGA
GCAAAAACCAGCTGGAGCAAGAACTGGCCGATAACTCATGGCTGACTATCCCTGCCGATCAGGCCCTACTCTTCGATGTC
AAACACGAGGATAGATGGCAACAAGCGAGCCGCGCGCTCGGCTTTGATGCTTGGCAATTGTCATCACAGGCGGGCCACGC
CTAG

Upstream 100 bases:

>100_bases
AAAACTACAAAGTCAAATTAGCCGGCGGTTGATACGCCACCAGCCTAAGCCGCTGGATTTAATCTATTGGTCAACGCCTG
TGGGCTGAACGGAGCATTTA

Downstream 100 bases:

>100_bases
CCGATTTTATTGTGACGAGTGAATATAGATGAACGCAAAAACCGTTTTAGGTTTTGATTTTGGAACAAAAAGTATTGGTG
TCGCCATAGGGCAACAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MESLQNHFLIAMPSLDDTFFERTVIYLCEHDEKGAMGLVINKPLGIEVNSLLEQMDLPAEQVSTDLALGAQVLMGGPVSQ
DRGFVLHTSQPYWANSTELSSGLMLTTSRDVLTAIGSERSPEKFIVALGYAGWSKNQLEQELADNSWLTIPADQALLFDV
KHEDRWQQASRALGFDAWQLSSQAGHA

Sequences:

>Translated_187_residues
MESLQNHFLIAMPSLDDTFFERTVIYLCEHDEKGAMGLVINKPLGIEVNSLLEQMDLPAEQVSTDLALGAQVLMGGPVSQ
DRGFVLHTSQPYWANSTELSSGLMLTTSRDVLTAIGSERSPEKFIVALGYAGWSKNQLEQELADNSWLTIPADQALLFDV
KHEDRWQQASRALGFDAWQLSSQAGHA
>Mature_187_residues
MESLQNHFLIAMPSLDDTFFERTVIYLCEHDEKGAMGLVINKPLGIEVNSLLEQMDLPAEQVSTDLALGAQVLMGGPVSQ
DRGFVLHTSQPYWANSTELSSGLMLTTSRDVLTAIGSERSPEKFIVALGYAGWSKNQLEQELADNSWLTIPADQALLFDV
KHEDRWQQASRALGFDAWQLSSQAGHA

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=186, Percent_Identity=46.2365591397849, Blast_Score=197, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1199_SHESM (Q0HKY8)

Other databases:

- EMBL:   CP000446
- RefSeq:   YP_733336.1
- ProteinModelPortal:   Q0HKY8
- SMR:   Q0HKY8
- STRING:   Q0HKY8
- GeneID:   4251238
- GenomeReviews:   CP000446_GR
- KEGG:   she:Shewmr4_1199
- eggNOG:   COG1678
- HOGENOM:   HBG530212
- OMA:   LIAMPGM
- ProtClustDB:   CLSK907119
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 20665; Mature: 20665

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLQNHFLIAMPSLDDTFFERTVIYLCEHDEKGAMGLVINKPLGIEVNSLLEQMDLPAE
CCCCCCCEEEEECCCCCHHHHEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCCHH
QVSTDLALGAQVLMGGPVSQDRGFVLHTSQPYWANSTELSSGLMLTTSRDVLTAIGSERS
HHHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECHHHHHHHCCCCC
PEKFIVALGYAGWSKNQLEQELADNSWLTIPADQALLFDVKHEDRWQQASRALGFDAWQL
CCEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHHHCCCCCEEC
SSQAGHA
CCCCCCC
>Mature Secondary Structure
MESLQNHFLIAMPSLDDTFFERTVIYLCEHDEKGAMGLVINKPLGIEVNSLLEQMDLPAE
CCCCCCCEEEEECCCCCHHHHEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCCCHH
QVSTDLALGAQVLMGGPVSQDRGFVLHTSQPYWANSTELSSGLMLTTSRDVLTAIGSERS
HHHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECHHHHHHHCCCCC
PEKFIVALGYAGWSKNQLEQELADNSWLTIPADQALLFDVKHEDRWQQASRALGFDAWQL
CCEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCEEEEECCCHHHHHHHHHHCCCCCEEC
SSQAGHA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA