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The map label for this gene is yfgC [C]

Identifier: 117919413

GI number: 117919413

Start: 1131543

End: 1132352

Strand: Direct

Name: yfgC [C]

Synonym: Shewana3_0964

Alternate gene names: 117919413

Gene position: 1131543-1132352 (Clockwise)

Preceding gene: 117919412

Following gene: 117919414

Centisome position: 22.76

GC content: 53.33

Gene sequence:

>810_bases
ATGAAAGCAACAACACTCGCCTTAGTGGCGGTTGGACTCACGTTAGGATTATCGGGCTGCGCGACCACTAAATCGCCCAC
GGGGAGGGGTCAAACCTTGCTGTATTCGGCATCGCAAATGCAGCAAATGGGGGATGCTTCTTTTGAAGAAATGAAAAAGC
AGCAAAAGATCAGTAGCGATAAAAAGCTGACTCAGTATGTAAATTGCGTGGCGAATCGCGTCACTGCAGTGCTGCCCGAT
CAAAGCCAGAAGTGGGATGTCGTCTTGTTCAACTCCGAGCAAGTTAACGCCTTTGCATTGCCTGGCGGACACATTGGTGT
GTATACCGGCTTACTTAACGTCGCGAGTACTCCGGACCAACTGGCGACCGTATTAGGCCATGAAGTGGCCCACGTATTAG
CCCAACACGGTAATGAACAGGTCTCTCGGGCGCAGATGACGGGCATGGGGATGCAAATCGCCGATGCAGCCCTTGGCGCG
AGTGGAGTCTCAAACCGTGACTTATATATGTCTGCCTTAGGACTGGGGGCGCAGGTCGGGGTGATTTTACCCTTTGGTCG
CGCTCAGGAGAGTGAGGCAGATGTGATGGGGCTGGAGCTGATGGCGAGGGCGGGATTCGACCCAGCGCAGAGCGTGGTGC
TGTGGCACAATATGTCGAAAGCGGGTGGTAGCCAAGGGCCAGAGCTGTTATCAACGCATCCATCCAACAGCAATCGTATC
GCCCAACTCGAGCAATTACAGGGGCAAATGCAGCCTTTGTATCAGAGCGCAAAGGCAAGTGTTAAAAACCAATGCGTGTT
GCCGAAATAG

Upstream 100 bases:

>100_bases
AAGGCAAGTTCTGAATGTCGTTTGGCTTCTGCTTGCTATCTCAGTAAAATCTTAATCATGATTAGCTAGGTTCGGCCTCG
TTCGGATTAAGGAGTTCCCT

Downstream 100 bases:

>100_bases
CGATTTAGGGCGTGGCGCTCGTTTAGATGCAGGCCTTATCTTGCCGCAATTAGGCGCTATTGCTGGATAAATACGCATCG
GTTACGTAAAATCGCCGCCA

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MKATTLALVAVGLTLGLSGCATTKSPTGRGQTLLYSASQMQQMGDASFEEMKKQQKISSDKKLTQYVNCVANRVTAVLPD
QSQKWDVVLFNSEQVNAFALPGGHIGVYTGLLNVASTPDQLATVLGHEVAHVLAQHGNEQVSRAQMTGMGMQIADAALGA
SGVSNRDLYMSALGLGAQVGVILPFGRAQESEADVMGLELMARAGFDPAQSVVLWHNMSKAGGSQGPELLSTHPSNSNRI
AQLEQLQGQMQPLYQSAKASVKNQCVLPK

Sequences:

>Translated_269_residues
MKATTLALVAVGLTLGLSGCATTKSPTGRGQTLLYSASQMQQMGDASFEEMKKQQKISSDKKLTQYVNCVANRVTAVLPD
QSQKWDVVLFNSEQVNAFALPGGHIGVYTGLLNVASTPDQLATVLGHEVAHVLAQHGNEQVSRAQMTGMGMQIADAALGA
SGVSNRDLYMSALGLGAQVGVILPFGRAQESEADVMGLELMARAGFDPAQSVVLWHNMSKAGGSQGPELLSTHPSNSNRI
AQLEQLQGQMQPLYQSAKASVKNQCVLPK
>Mature_269_residues
MKATTLALVAVGLTLGLSGCATTKSPTGRGQTLLYSASQMQQMGDASFEEMKKQQKISSDKKLTQYVNCVANRVTAVLPD
QSQKWDVVLFNSEQVNAFALPGGHIGVYTGLLNVASTPDQLATVLGHEVAHVLAQHGNEQVSRAQMTGMGMQIADAALGA
SGVSNRDLYMSALGLGAQVGVILPFGRAQESEADVMGLELMARAGFDPAQSVVLWHNMSKAGGSQGPELLSTHPSNSNRI
AQLEQLQGQMQPLYQSAKASVKNQCVLPK

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=238, Percent_Identity=31.0924369747899, Blast_Score=100, Evalue=1e-21,
Organism=Escherichia coli, GI1788840, Length=271, Percent_Identity=29.8892988929889, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI87082185, Length=251, Percent_Identity=27.4900398406374, Blast_Score=73, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322940, Length=185, Percent_Identity=30.8108108108108, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 28440; Mature: 28440

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATTLALVAVGLTLGLSGCATTKSPTGRGQTLLYSASQMQQMGDASFEEMKKQQKISSD
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHCCH
KKLTQYVNCVANRVTAVLPDQSQKWDVVLFNSEQVNAFALPGGHIGVYTGLLNVASTPDQ
HHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHCCCHHH
LATVLGHEVAHVLAQHGNEQVSRAQMTGMGMQIADAALGASGVSNRDLYMSALGLGAQVG
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCEEE
VILPFGRAQESEADVMGLELMARAGFDPAQSVVLWHNMSKAGGSQGPELLSTHPSNSNRI
EEEECCCCCCCCHHHHHHHHHHHCCCCHHHHEEEEECCCCCCCCCCCHHHCCCCCCCCHH
AQLEQLQGQMQPLYQSAKASVKNQCVLPK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKATTLALVAVGLTLGLSGCATTKSPTGRGQTLLYSASQMQQMGDASFEEMKKQQKISSD
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHCCH
KKLTQYVNCVANRVTAVLPDQSQKWDVVLFNSEQVNAFALPGGHIGVYTGLLNVASTPDQ
HHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHCCCHHH
LATVLGHEVAHVLAQHGNEQVSRAQMTGMGMQIADAALGASGVSNRDLYMSALGLGAQVG
HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCEEE
VILPFGRAQESEADVMGLELMARAGFDPAQSVVLWHNMSKAGGSQGPELLSTHPSNSNRI
EEEECCCCCCCCHHHHHHHHHHHCCCCHHHHEEEEECCCCCCCCCCCHHHCCCCCCCCHH
AQLEQLQGQMQPLYQSAKASVKNQCVLPK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]