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The map label for this gene is ynaD [H]

Identifier: 117919412

GI number: 117919412

Start: 1130825

End: 1131418

Strand: Direct

Name: ynaD [H]

Synonym: Shewana3_0963

Alternate gene names: 117919412

Gene position: 1130825-1131418 (Clockwise)

Preceding gene: 117919411

Following gene: 117919413

Centisome position: 22.74

GC content: 47.31

Gene sequence:

>594_bases
ATGGCGTCGACATTAGCGATAAGTAACGCACTTCACCACATGGTCAATCACGGGTTAATCACTCAACGTTTTAGGCTTCG
GCCATTTCAGCGAGCGGATCTCGAGGCTTTTACTGCCTATCGAGCCGAGCCTAAGGTCGCCAAATATCAAAGCTGGACGG
ATTACTCTTATAGCGATGCTGTCGCGTTATTCGAGAACATGGATTACGCACAATTTGGCGCGGCGGACACTTGGTTTCAA
TTGGCGATTGTCACTGCGGCATCGCTTGTAACGCCTGCCACCTTAGTGGGCGATTTGGCGCTGTATTTTATTGATGAGCA
GCAAATGGAAATCGGCTTTACGATTGCGCCTGAGTATCAAGGTCAGCAGGTTGCGTTTGAGGCAGTCAGCGCATTACTGG
ATTACCTCTTTGTGGAATTAGATAAGCATCGTGTTATTGCGATAACCGATACTCAAAATCTTGCCAGCTGTCGATTACTC
GAAAAACTCGGTTTTCGGCGCGAAGCCCATTATGTCAAAAATATCTTCTTTAAGGGCGCATGGGGCGATGAATACCTCTA
TGCCATGTTAAGGGGAGACTATATTGCACCTTAA

Upstream 100 bases:

>100_bases
CCATAAATTGCTAGCACTTATTGGCTGCTGTTTACCTGTGTGCTTATTCATATTAGAAGCTTACTCACATTAGAGGCTTA
CTCTGATTAAAGGATCCGGC

Downstream 100 bases:

>100_bases
CGGGCTCAAAGCTCACTCGGCTTTAAGGCAAGTTCTGAATGTCGTTTGGCTTCTGCTTGCTATCTCAGTAAAATCTTAAT
CATGATTAGCTAGGTTCGGC

Product: GCN5-related N-acetyltransferase

Products: Coenzyme A; H+; N8-Acetylspermidine [C]

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MASTLAISNALHHMVNHGLITQRFRLRPFQRADLEAFTAYRAEPKVAKYQSWTDYSYSDAVALFENMDYAQFGAADTWFQ
LAIVTAASLVTPATLVGDLALYFIDEQQMEIGFTIAPEYQGQQVAFEAVSALLDYLFVELDKHRVIAITDTQNLASCRLL
EKLGFRREAHYVKNIFFKGAWGDEYLYAMLRGDYIAP

Sequences:

>Translated_197_residues
MASTLAISNALHHMVNHGLITQRFRLRPFQRADLEAFTAYRAEPKVAKYQSWTDYSYSDAVALFENMDYAQFGAADTWFQ
LAIVTAASLVTPATLVGDLALYFIDEQQMEIGFTIAPEYQGQQVAFEAVSALLDYLFVELDKHRVIAITDTQNLASCRLL
EKLGFRREAHYVKNIFFKGAWGDEYLYAMLRGDYIAP
>Mature_196_residues
ASTLAISNALHHMVNHGLITQRFRLRPFQRADLEAFTAYRAEPKVAKYQSWTDYSYSDAVALFENMDYAQFGAADTWFQL
AIVTAASLVTPATLVGDLALYFIDEQQMEIGFTIAPEYQGQQVAFEAVSALLDYLFVELDKHRVIAITDTQNLASCRLLE
KLGFRREAHYVKNIFFKGAWGDEYLYAMLRGDYIAP

Specific function: Regulates Polyamine Concentration By Their Degradation. Acts On Spermidine, Forming N(1)- And N(8)-Acetylspermidine. [C]

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.57 [C]

Molecular weight: Translated: 22402; Mature: 22271

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTLAISNALHHMVNHGLITQRFRLRPFQRADLEAFTAYRAEPKVAKYQSWTDYSYSDA
CCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHCCCCCCCCHHHH
VALFENMDYAQFGAADTWFQLAIVTAASLVTPATLVGDLALYFIDEQQMEIGFTIAPEYQ
HHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCC
GQQVAFEAVSALLDYLFVELDKHRVIAITDTQNLASCRLLEKLGFRREAHYVKNIFFKGA
CHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
WGDEYLYAMLRGDYIAP
CCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ASTLAISNALHHMVNHGLITQRFRLRPFQRADLEAFTAYRAEPKVAKYQSWTDYSYSDA
CCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHCCCCCCCCHHHH
VALFENMDYAQFGAADTWFQLAIVTAASLVTPATLVGDLALYFIDEQQMEIGFTIAPEYQ
HHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCC
GQQVAFEAVSALLDYLFVELDKHRVIAITDTQNLASCRLLEKLGFRREAHYVKNIFFKGA
CHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
WGDEYLYAMLRGDYIAP
CCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acetyl-CoA; Spermidine [C]

Specific reaction: Acetyl-CoA + Spermidine --> Coenzyme A + H+ + N8-Acetylspermidine [C]

General reaction: Acyl group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]