Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_008577 |
Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is proB [H]
Identifier: 117919403
GI number: 117919403
Start: 1119491
End: 1120609
Strand: Direct
Name: proB [H]
Synonym: Shewana3_0954
Alternate gene names: 117919403
Gene position: 1119491-1120609 (Clockwise)
Preceding gene: 117919402
Following gene: 117919404
Centisome position: 22.51
GC content: 50.85
Gene sequence:
>1119_bases ATGAATTTAAGTGAGATTGCGTATCGCCGCGTGGTAGTGAAGTTAGGGACGAGTGTGCTGACGTCTGGCAGTAAACAGCT AGATAAAGCCCATATGGTTGAGCTTGCTCGTCAAATGGCAGCACTGATGAGATCAGGGGTCGAAGTCGTATTATGCACTT CTGGCGCAATTGCCGCCGGACGCGAACATCTCCAATACCCGGAATTGCCCGACACTATGGCCAATAAACAGTTATTAGCC GCTGTCGGGCAGAGTCAGCTTATTCTCGCTTGGGCACAACTCTTTAGCATCTATGGTTTGCATGTGGGGCAATTGCTGCT GACCCGTGCTGACCTACACGATAGAGAGCGATATTTGAATGCCCGCGATACGCTTAATGCCTTGCTGGCAAACAATATTA TCCCAATCATCAACGAAAACGATGCCGTTGCTACTAATGAGATCAAAGTGGGCGACAACGACAACTTGTCGGCGCGTGCG GCACTGCTGTGTGATGCCGACCTGTTGATTTTGTTGACGGATCAAAAGGGCTTATTCGATGCCGATCCGCGCACTAACCC TAATGCTAAGCTGATTTCGCAGGTCGAGAAAATTGACGACAGTCTGCGCCTGTTAGCGGGTGGTTCGGTTTCTGGCTTAG GTACGGGCGGAATGTCGACTAAGCTAGAAGCTGCGGATATTGCTCGCCGCGCGGGTATTGAAGTGGTGATTGCCTCGGGT CATCACCCCGATGTGATTAAAAAGGTTGTCGGCAAAGAATCTGTCGGCACGCATTTTAGTGCCATCGAAAATCCGTTAGA GAGCCGCAAACAGTGGATTTTAGCGGGACCTGCCGCCCAAGGTTCACTGGTGCTCGATGCGGGCGCGGTGAAAGCCGTGA CCGAAAAAGGTCGCAGCTTGCTCTCTAAGGGGATTATTGGCGTTAAAGGGGAATTTGAACGTGGTGCAACCCTGCAATTG GTTGACCAAAAAGGCAAAATCATTGCCAGAGGCATCACCCGCTACTGTGGTGAGGCCTTAGGGTTAATTGCGGGTAAACA TTCCGACGAAATCGAGTCAGTGCTCGGTTACGATTATGGTGACGCAATAGTGCACCGCAACGACATGGTCGTCTTATAA
Upstream 100 bases:
>100_bases AAGCAGAATTGAAAATTTCTACCAACATCCGGCCCACTAACTACCAATTGCTCTGCGGATTAGGTATAAGGATTATCCGG TTATTTTCTACATATGAATA
Downstream 100 bases:
>100_bases GCGAGGTCTGTTTTGAGTCAAACTAATCAAGCGCAATATTTACAACAACTGGGCAGTCAGGCTAAGCAAGCCAGCTATGC CTTGGCCAATCTAAGCGCCG
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK [H]
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MNLSEIAYRRVVVKLGTSVLTSGSKQLDKAHMVELARQMAALMRSGVEVVLCTSGAIAAGREHLQYPELPDTMANKQLLA AVGQSQLILAWAQLFSIYGLHVGQLLLTRADLHDRERYLNARDTLNALLANNIIPIINENDAVATNEIKVGDNDNLSARA ALLCDADLLILLTDQKGLFDADPRTNPNAKLISQVEKIDDSLRLLAGGSVSGLGTGGMSTKLEAADIARRAGIEVVIASG HHPDVIKKVVGKESVGTHFSAIENPLESRKQWILAGPAAQGSLVLDAGAVKAVTEKGRSLLSKGIIGVKGEFERGATLQL VDQKGKIIARGITRYCGEALGLIAGKHSDEIESVLGYDYGDAIVHRNDMVVL
Sequences:
>Translated_372_residues MNLSEIAYRRVVVKLGTSVLTSGSKQLDKAHMVELARQMAALMRSGVEVVLCTSGAIAAGREHLQYPELPDTMANKQLLA AVGQSQLILAWAQLFSIYGLHVGQLLLTRADLHDRERYLNARDTLNALLANNIIPIINENDAVATNEIKVGDNDNLSARA ALLCDADLLILLTDQKGLFDADPRTNPNAKLISQVEKIDDSLRLLAGGSVSGLGTGGMSTKLEAADIARRAGIEVVIASG HHPDVIKKVVGKESVGTHFSAIENPLESRKQWILAGPAAQGSLVLDAGAVKAVTEKGRSLLSKGIIGVKGEFERGATLQL VDQKGKIIARGITRYCGEALGLIAGKHSDEIESVLGYDYGDAIVHRNDMVVL >Mature_372_residues MNLSEIAYRRVVVKLGTSVLTSGSKQLDKAHMVELARQMAALMRSGVEVVLCTSGAIAAGREHLQYPELPDTMANKQLLA AVGQSQLILAWAQLFSIYGLHVGQLLLTRADLHDRERYLNARDTLNALLANNIIPIINENDAVATNEIKVGDNDNLSARA ALLCDADLLILLTDQKGLFDADPRTNPNAKLISQVEKIDDSLRLLAGGSVSGLGTGGMSTKLEAADIARRAGIEVVIASG HHPDVIKKVVGKESVGTHFSAIENPLESRKQWILAGPAAQGSLVLDAGAVKAVTEKGRSLLSKGIIGVKGEFERGATLQL VDQKGKIIARGITRYCGEALGLIAGKHSDEIESVLGYDYGDAIVHRNDMVVL
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline [H]
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
Organism=Homo sapiens, GI21361368, Length=330, Percent_Identity=34.5454545454545, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI62912457, Length=328, Percent_Identity=34.4512195121951, Blast_Score=149, Evalue=5e-36, Organism=Escherichia coli, GI1786437, Length=361, Percent_Identity=63.7119113573407, Blast_Score=456, Evalue=1e-129, Organism=Caenorhabditis elegans, GI17569967, Length=268, Percent_Identity=34.7014925373134, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17569969, Length=268, Percent_Identity=34.7014925373134, Blast_Score=137, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6320506, Length=415, Percent_Identity=36.144578313253, Blast_Score=213, Evalue=5e-56, Organism=Saccharomyces cerevisiae, GI6321822, Length=411, Percent_Identity=34.7931873479319, Blast_Score=209, Evalue=7e-55, Organism=Drosophila melanogaster, GI21357643, Length=318, Percent_Identity=33.9622641509434, Blast_Score=139, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 [H]
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA [H]
EC number: =2.7.2.11 [H]
Molecular weight: Translated: 39717; Mature: 39717
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50890 PUA ; PS00902 GLUTAMATE_5_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSEIAYRRVVVKLGTSVLTSGSKQLDKAHMVELARQMAALMRSGVEVVLCTSGAIAAG CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHC REHLQYPELPDTMANKQLLAAVGQSQLILAWAQLFSIYGLHVGQLLLTRADLHDRERYLN HHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ARDTLNALLANNIIPIINENDAVATNEIKVGDNDNLSARAALLCDADLLILLTDQKGLFD HHHHHHHHHHCCCEEEECCCCCEEECEEEECCCCCCCCEEEEEECCCEEEEEECCCCCCC ADPRTNPNAKLISQVEKIDDSLRLLAGGSVSGLGTGGMSTKLEAADIARRAGIEVVIASG CCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECC HHPDVIKKVVGKESVGTHFSAIENPLESRKQWILAGPAAQGSLVLDAGAVKAVTEKGRSL CCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCEEEECCHHHHHHHHHHHH LSKGIIGVKGEFERGATLQLVDQKGKIIARGITRYCGEALGLIAGKHSDEIESVLGYDYG HHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC DAIVHRNDMVVL CCEEECCCEEEC >Mature Secondary Structure MNLSEIAYRRVVVKLGTSVLTSGSKQLDKAHMVELARQMAALMRSGVEVVLCTSGAIAAG CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHC REHLQYPELPDTMANKQLLAAVGQSQLILAWAQLFSIYGLHVGQLLLTRADLHDRERYLN HHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ARDTLNALLANNIIPIINENDAVATNEIKVGDNDNLSARAALLCDADLLILLTDQKGLFD HHHHHHHHHHCCCEEEECCCCCEEECEEEECCCCCCCCEEEEEECCCEEEEEECCCCCCC ADPRTNPNAKLISQVEKIDDSLRLLAGGSVSGLGTGGMSTKLEAADIARRAGIEVVIASG CCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECC HHPDVIKKVVGKESVGTHFSAIENPLESRKQWILAGPAAQGSLVLDAGAVKAVTEKGRSL CCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCEEEECCHHHHHHHHHHHH LSKGIIGVKGEFERGATLQLVDQKGKIIARGITRYCGEALGLIAGKHSDEIESVLGYDYG HHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC DAIVHRNDMVVL CCEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]