Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is purP [H]
Identifier: 117919402
GI number: 117919402
Start: 1118027
End: 1119316
Strand: Direct
Name: purP [H]
Synonym: Shewana3_0953
Alternate gene names: 117919402
Gene position: 1118027-1119316 (Clockwise)
Preceding gene: 117919401
Following gene: 117919403
Centisome position: 22.49
GC content: 49.07
Gene sequence:
>1290_bases ATGTTAGAAAAGCTGTTCAAACTGAAACAAAATCAAACGAGCCTCAAGCAGGAAGCGATAGCAGGTTTGACAACATTTAT GACTATGGCCTACATCATTTTTGTGAATCCAATGATGTTAGCCGATGCGGGTATGGATCATGGCGCCGTGTTTGTGGCCA CCTGTTTAGCGGCGGCGGTGGGTTGTATTGTGATGGGTGTCATGGCGAACTATCCCATTGCACTGGCTCCAGGTATGGGA CTCAATGCCTTTTTTACCTACACAGTCGTGGGTGAAATGGGCTATAGCTGGGAAACGGCACTCGGCGCAGTTTTCCTGTC GGGAATTTGCTTTTTAATTCTGTCTCTAGTGCGTATTCGCGAGTGGATTGTGAACAGTATTCCTATGTCGCTGCGTATCG GTATTGCCGCGGGTATTGGTTTATTCCTCGCGCTGATCGGTCTTAAGAGTGCTGGCATTGTGGTAGCAAGCCCTGCAACC TTAGTGACCATGGGCGATATTACCGCCTTCCCTGCGGTAATGGCCGTGTTAGGTTTCTTCCTGATCATCGCCATGGTGCA ACGTGGCATGAAATCGGCAGTGATTTTAAGCATCCTTATCATCACAGGACTGGGATTAATCTTCGGTGATGTGCATTACA ACGGTATCGTCTCTATGCCGCCTTCAGTCGCACCGACCTTTATGGCGATGGATTTATCCCAAGTATTTGAAGTGACAATG CTGTCTGTGGTATTTGCCTTCTTATTTGTGGATCTCTTTGATACCTCTGGCACCTTAGTTGCGGTGGCGCAGCGTGGTGG TTTCCTCGATGAGAAAGGCCGTTTACCTCGCTTAAACCGTGCTTTAACCGCTGACAGTTTAGCCACGATTGCGGGCGCAG CCTTAGGCACGTCAACTACCACCAGTTATATCGAAAGTACCGCAGGGGTGAGCGCGGGCGGTCGTACTGGCTTAACCGCT GTCGTGGTTGGTTTACTGTTTATCTTGGCCTTATTTCTATCACCATTAGCAGGGATGATCCCTGCCTATGCCACGGCTGG TACGCTGTTCTATGTGGCGATTCTGATGATGTCCGGACTGGTTCACGTCGAATGGGAAGATTTAACAGAAGCAGCGCCAG TAGTTGTGGTCTGTATCCTAATGCCGCTTACCTTCTCTATCGCGACAGGGATTGCGCTGGGGATTATTTCCTATGCCGCC ATCAAACTGTTAACAGGCCGTTTTAGCGATTTAAATATCGGGGTGATTGTGCTCGCGGCGATGTTTATTGCGAAATTTAT TTACGGCTGA
Upstream 100 bases:
>100_bases TGACCAGCACAAACTCCCTATAATCCCCAGCGAAAAACACGACTACATAGTGTTTACATTTTTGACCCTACCTACTTTAA AAGAAAAGGAACCCAGTTCC
Downstream 100 bases:
>100_bases TACTTAGCCAGTCGCCAATTAGACGGTTTTTTTGAGGGTCATCTAATCGATGGCCCTTTTTTATGCGCGATCCCAAGCAG AATTGAAAATTTCTACCAAC
Product: xanthine/uracil/vitamin C permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAVGCIVMGVMANYPIALAPGMG LNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIREWIVNSIPMSLRIGIAAGIGLFLALIGLKSAGIVVASPAT LVTMGDITAFPAVMAVLGFFLIIAMVQRGMKSAVILSILIITGLGLIFGDVHYNGIVSMPPSVAPTFMAMDLSQVFEVTM LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAALGTSTTTSYIESTAGVSAGGRTGLTA VVVGLLFILALFLSPLAGMIPAYATAGTLFYVAILMMSGLVHVEWEDLTEAAPVVVVCILMPLTFSIATGIALGIISYAA IKLLTGRFSDLNIGVIVLAAMFIAKFIYG
Sequences:
>Translated_429_residues MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAVGCIVMGVMANYPIALAPGMG LNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIREWIVNSIPMSLRIGIAAGIGLFLALIGLKSAGIVVASPAT LVTMGDITAFPAVMAVLGFFLIIAMVQRGMKSAVILSILIITGLGLIFGDVHYNGIVSMPPSVAPTFMAMDLSQVFEVTM LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAALGTSTTTSYIESTAGVSAGGRTGLTA VVVGLLFILALFLSPLAGMIPAYATAGTLFYVAILMMSGLVHVEWEDLTEAAPVVVVCILMPLTFSIATGIALGIISYAA IKLLTGRFSDLNIGVIVLAAMFIAKFIYG >Mature_429_residues MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAVGCIVMGVMANYPIALAPGMG LNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIREWIVNSIPMSLRIGIAAGIGLFLALIGLKSAGIVVASPAT LVTMGDITAFPAVMAVLGFFLIIAMVQRGMKSAVILSILIITGLGLIFGDVHYNGIVSMPPSVAPTFMAMDLSQVFEVTM LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAALGTSTTTSYIESTAGVSAGGRTGLTA VVVGLLFILALFLSPLAGMIPAYATAGTLFYVAILMMSGLVHVEWEDLTEAAPVVVVCILMPLTFSIATGIALGIISYAA IKLLTGRFSDLNIGVIVLAAMFIAKFIYG
Specific function: High-affinity uptake of adenine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=428, Percent_Identity=52.803738317757, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI87082309, Length=426, Percent_Identity=50.2347417840376, Blast_Score=459, Evalue=1e-130, Organism=Escherichia coli, GI1790499, Length=425, Percent_Identity=38.8235294117647, Blast_Score=286, Evalue=2e-78, Organism=Escherichia coli, GI48994909, Length=435, Percent_Identity=38.1609195402299, Blast_Score=266, Evalue=2e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 44988; Mature: 44988
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAV CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GCIVMGVMANYPIALAPGMGLNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIR HHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EWIVNSIPMSLRIGIAAGIGLFLALIGLKSAGIVVASPATLVTMGDITAFPAVMAVLGFF HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEECHHHHHHHHHHHHHHH LIIAMVQRGMKSAVILSILIITGLGLIFGDVHYNGIVSMPPSVAPTFMAMDLSQVFEVTM HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHH LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAALGTSTT HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH TSYIESTAGVSAGGRTGLTAVVVGLLFILALFLSPLAGMIPAYATAGTLFYVAILMMSGL HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VHVEWEDLTEAAPVVVVCILMPLTFSIATGIALGIISYAAIKLLTGRFSDLNIGVIVLAA EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH MFIAKFIYG HHHHHHHCC >Mature Secondary Structure MLEKLFKLKQNQTSLKQEAIAGLTTFMTMAYIIFVNPMMLADAGMDHGAVFVATCLAAAV CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GCIVMGVMANYPIALAPGMGLNAFFTYTVVGEMGYSWETALGAVFLSGICFLILSLVRIR HHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EWIVNSIPMSLRIGIAAGIGLFLALIGLKSAGIVVASPATLVTMGDITAFPAVMAVLGFF HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEECHHHHHHHHHHHHHHH LIIAMVQRGMKSAVILSILIITGLGLIFGDVHYNGIVSMPPSVAPTFMAMDLSQVFEVTM HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHH LSVVFAFLFVDLFDTSGTLVAVAQRGGFLDEKGRLPRLNRALTADSLATIAGAALGTSTT HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH TSYIESTAGVSAGGRTGLTAVVVGLLFILALFLSPLAGMIPAYATAGTLFYVAILMMSGL HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VHVEWEDLTEAAPVVVVCILMPLTFSIATGIALGIISYAAIKLLTGRFSDLNIGVIVLAA EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH MFIAKFIYG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]