Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is cysD [H]
Identifier: 117919315
GI number: 117919315
Start: 1005319
End: 1006227
Strand: Direct
Name: cysD [H]
Synonym: Shewana3_0863
Alternate gene names: 117919315
Gene position: 1005319-1006227 (Clockwise)
Preceding gene: 117919314
Following gene: 117919316
Centisome position: 20.22
GC content: 48.84
Gene sequence:
>909_bases ATGGCCGGGCGTGAATTAAGCCACTTACAACAACTGGAAGCCGAAAGCATTCAGATCATTCGTGAAGTCGCTGCCGAATT CGACAATCCAGTAATGTTGTATTCCATCGGAAAAGATTCTTCGGTGATGTTACACCTTGCGCGTAAAGCTTTTTATCCCG GCAAGATCCCATTCCCCTTGCTGCACGTGGATACGGGCTGGAAATTCAAAGAGATGATCGCTTTTCGTGATGCGCAGGCG AAAAAGTTTGGCTTTGAATTATTAACCCACACCAACCCCGAAGGCGTTGCCCAAGGGATTAACCCCTTCGATCATGGCAG TGCCAAGCACACTGACATCATGAAAACTCAAGGTTTAAAACAAGCCTTAAACCAATATGGTTTCGATGCCGCATTCGGTG GTGCGCGCCGCGATGAGGAAAAGTCCCGCGCGAAGGAGCGGGTGTATTCGTTCCGCGATCGTCACCATAGATGGGATCCC AAGAATCAGCGTCCCGAACTGTGGCGCACCTATAACGGTGCGGTAAATAAGGGCGAAAGTATTCGTGTCTTCCCGTTATC TAACTGGACCGAACTCGATATTTGGCAATATATCTATCAAGAAAACATTGAGTTAGTACCACTGTATTTTGCCGCCGAGC GCCCTGTGGTTGAGCGTGGCGGTCAGTTAATTATGGCCGACGATGAGCGTATGAAGCTCGAGGAAGGCGAAACCATCAAG CATGAGGTGGTACGTTTTAGAACCTTAGGTTGTTATCCATTGACGGCGGCGATGCATTCGCAGGCGGATAATCTCGAAAA AATCATCGAAGAAATGCTGCTAACTCGCTCGAGCGAACGCCAAGGGCGATTGATTGACTCGGATCAGAGTGCATCGATGG AGCAGAAGAAACGCCAAGGTTATTTCTAA
Upstream 100 bases:
>100_bases CAAGATTGTGGCAAAAATTTAGTTAAATCAGATTTTTTAGAAATAGTTAAGTTAAATCCAGCTGCCTGTCGCAGCCCATT TTAGGTAAACGGAGAAGAGT
Downstream 100 bases:
>100_bases ACCAAGGCATTTCGAGCGCAGGTTAGAGACAGATTAAACCGATTTCGTGAATGTCCCGATGAAGGCTCTTAGAGCAATCG AGTACCAGTGACTTCACGAA
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MAGRELSHLQQLEAESIQIIREVAAEFDNPVMLYSIGKDSSVMLHLARKAFYPGKIPFPLLHVDTGWKFKEMIAFRDAQA KKFGFELLTHTNPEGVAQGINPFDHGSAKHTDIMKTQGLKQALNQYGFDAAFGGARRDEEKSRAKERVYSFRDRHHRWDP KNQRPELWRTYNGAVNKGESIRVFPLSNWTELDIWQYIYQENIELVPLYFAAERPVVERGGQLIMADDERMKLEEGETIK HEVVRFRTLGCYPLTAAMHSQADNLEKIIEEMLLTRSSERQGRLIDSDQSASMEQKKRQGYF
Sequences:
>Translated_302_residues MAGRELSHLQQLEAESIQIIREVAAEFDNPVMLYSIGKDSSVMLHLARKAFYPGKIPFPLLHVDTGWKFKEMIAFRDAQA KKFGFELLTHTNPEGVAQGINPFDHGSAKHTDIMKTQGLKQALNQYGFDAAFGGARRDEEKSRAKERVYSFRDRHHRWDP KNQRPELWRTYNGAVNKGESIRVFPLSNWTELDIWQYIYQENIELVPLYFAAERPVVERGGQLIMADDERMKLEEGETIK HEVVRFRTLGCYPLTAAMHSQADNLEKIIEEMLLTRSSERQGRLIDSDQSASMEQKKRQGYF >Mature_301_residues AGRELSHLQQLEAESIQIIREVAAEFDNPVMLYSIGKDSSVMLHLARKAFYPGKIPFPLLHVDTGWKFKEMIAFRDAQAK KFGFELLTHTNPEGVAQGINPFDHGSAKHTDIMKTQGLKQALNQYGFDAAFGGARRDEEKSRAKERVYSFRDRHHRWDPK NQRPELWRTYNGAVNKGESIRVFPLSNWTELDIWQYIYQENIELVPLYFAAERPVVERGGQLIMADDERMKLEEGETIKH EVVRFRTLGCYPLTAAMHSQADNLEKIIEEMLLTRSSERQGRLIDSDQSASMEQKKRQGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=297, Percent_Identity=78.4511784511784, Blast_Score=498, Evalue=1e-142,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 34938; Mature: 34807
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRELSHLQQLEAESIQIIREVAAEFDNPVMLYSIGKDSSVMLHLARKAFYPGKIPFPL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEE LHVDTGWKFKEMIAFRDAQAKKFGFELLTHTNPEGVAQGINPFDHGSAKHTDIMKTQGLK EEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHH QALNQYGFDAAFGGARRDEEKSRAKERVYSFRDRHHRWDPKNQRPELWRTYNGAVNKGES HHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCE IRVFPLSNWTELDIWQYIYQENIELVPLYFAAERPVVERGGQLIMADDERMKLEEGETIK EEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCEEEEECCCHHHCCCCCHHH HEVVRFRTLGCYPLTAAMHSQADNLEKIIEEMLLTRSSERQGRLIDSDQSASMEQKKRQG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCC YF CC >Mature Secondary Structure AGRELSHLQQLEAESIQIIREVAAEFDNPVMLYSIGKDSSVMLHLARKAFYPGKIPFPL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEE LHVDTGWKFKEMIAFRDAQAKKFGFELLTHTNPEGVAQGINPFDHGSAKHTDIMKTQGLK EEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHH QALNQYGFDAAFGGARRDEEKSRAKERVYSFRDRHHRWDPKNQRPELWRTYNGAVNKGES HHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCE IRVFPLSNWTELDIWQYIYQENIELVPLYFAAERPVVERGGQLIMADDERMKLEEGETIK EEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCEEEEECCCHHHCCCCCHHH HEVVRFRTLGCYPLTAAMHSQADNLEKIIEEMLLTRSSERQGRLIDSDQSASMEQKKRQG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCC YF CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA