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The map label for this gene is yrhP [H]

Identifier: 117919288

GI number: 117919288

Start: 969062

End: 969685

Strand: Direct

Name: yrhP [H]

Synonym: Shewana3_0836

Alternate gene names: 117919288

Gene position: 969062-969685 (Clockwise)

Preceding gene: 117919287

Following gene: 117919292

Centisome position: 19.49

GC content: 49.68

Gene sequence:

>624_bases
ATGGAGCTAGATTCGTTGCTGATGTTTGTGATTGCGTGCCTTTCAATCAATCTGATCCCTGGGCCCGATGTGGTCTACAT
CGTTTCGAACACTATGAAGGGTAAGATGGCCAGCGGTCTTAAAGCGGCGTTAGGATTAGGCGCAGGTTATTTTGTGCATA
CCTTGGCCGCTTGCTTAGGGCTCTCCGCCATTATCTTAAGTTCGGCCTTGGCCTTTAATATAGTGAAATGGCTCGGTGCG
GCTTACTTATTGTATTTAGGTGTAAAAGCCCTGATATCCTGCTGGCAGGGCCAGAGCAGAATCGTGATTGGCGACAACGC
CACGTCAAACACCAATGTGTTTTTACAGGGCATGGTGGTGAGTGTGTTAAATCCTAAGGTAGCGCTGTTTTTCCTATCAT
TTTTACCGCAATTTATCGACCCGACCTCGGGCGAGGTTGCCACGCAACTGTTAATCTTAGGTTTACTCTTCAGTGGCCTA
GCAACCTTGGTCAACCTGCTATATGCCGCCTGTGGCAGTTGGCTATTTAATCGACCCGATTCACAGCGTTACGCTCGCGG
ACTTGAGGGCGTTTCCGGCGTGTTACTGGTCGGGCTTGCCGGAAAAGTCGCTATTAGCGACTGA

Upstream 100 bases:

>100_bases
GTTAAGCCAGCGATTTAGTGGATGATACTCGTCTTGGCGCGGCAGTGAGGATAGGGTAGTTTAAGAAAATATGTCGGTGC
CGATAATCAGGGGAATATAA

Downstream 100 bases:

>100_bases
TAACCTAAGCGTCTGACTCTTACTCACTGCCAGTTAGTGAATGCATGAGATGGCGTCACACTTATCCACGATGCCATCGA
GCATACGCTTAGATTAACTT

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MELDSLLMFVIACLSINLIPGPDVVYIVSNTMKGKMASGLKAALGLGAGYFVHTLAACLGLSAIILSSALAFNIVKWLGA
AYLLYLGVKALISCWQGQSRIVIGDNATSNTNVFLQGMVVSVLNPKVALFFLSFLPQFIDPTSGEVATQLLILGLLFSGL
ATLVNLLYAACGSWLFNRPDSQRYARGLEGVSGVLLVGLAGKVAISD

Sequences:

>Translated_207_residues
MELDSLLMFVIACLSINLIPGPDVVYIVSNTMKGKMASGLKAALGLGAGYFVHTLAACLGLSAIILSSALAFNIVKWLGA
AYLLYLGVKALISCWQGQSRIVIGDNATSNTNVFLQGMVVSVLNPKVALFFLSFLPQFIDPTSGEVATQLLILGLLFSGL
ATLVNLLYAACGSWLFNRPDSQRYARGLEGVSGVLLVGLAGKVAISD
>Mature_207_residues
MELDSLLMFVIACLSINLIPGPDVVYIVSNTMKGKMASGLKAALGLGAGYFVHTLAACLGLSAIILSSALAFNIVKWLGA
AYLLYLGVKALISCWQGQSRIVIGDNATSNTNVFLQGMVVSVLNPKVALFFLSFLPQFIDPTSGEVATQLLILGLLFSGL
ATLVNLLYAACGSWLFNRPDSQRYARGLEGVSGVLLVGLAGKVAISD

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=145, Percent_Identity=33.1034482758621, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI48994979, Length=161, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21790; Mature: 21790

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDSLLMFVIACLSINLIPGPDVVYIVSNTMKGKMASGLKAALGLGAGYFVHTLAACLG
CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LSAIILSSALAFNIVKWLGAAYLLYLGVKALISCWQGQSRIVIGDNATSNTNVFLQGMVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH
SVLNPKVALFFLSFLPQFIDPTSGEVATQLLILGLLFSGLATLVNLLYAACGSWLFNRPD
HHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SQRYARGLEGVSGVLLVGLAGKVAISD
HHHHHHHHCCHHHHHHHHCCCCEEECC
>Mature Secondary Structure
MELDSLLMFVIACLSINLIPGPDVVYIVSNTMKGKMASGLKAALGLGAGYFVHTLAACLG
CCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LSAIILSSALAFNIVKWLGAAYLLYLGVKALISCWQGQSRIVIGDNATSNTNVFLQGMVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH
SVLNPKVALFFLSFLPQFIDPTSGEVATQLLILGLLFSGLATLVNLLYAACGSWLFNRPD
HHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SQRYARGLEGVSGVLLVGLAGKVAISD
HHHHHHHHCCHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]