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The map label for this gene is 117919292

Identifier: 117919292

GI number: 117919292

Start: 972865

End: 973701

Strand: Direct

Name: 117919292

Synonym: Shewana3_0840

Alternate gene names: NA

Gene position: 972865-973701 (Clockwise)

Preceding gene: 117919288

Following gene: 117919295

Centisome position: 19.57

GC content: 52.57

Gene sequence:

>837_bases
ATGGGTAGCAAAGGTAATGGTGTCACTTTTATCAGTGCCTCCACCTCCATTGAGGGCGAGATGCAACTGGTGGGCACGGC
ATTAGTTGCGGGGAAATTAGCGGGGAATATCCGCTGCGCCGGACAGATTAAAATCGAGCTTGGTGGTGAAGTCTCGGGTG
AGCTCAGCTGTGATGAACTGAAAGTCTGCGGAGTTTTTCGCGGCAAGGTGCGTTGTAATAAATTAGTGATTGTCAGCTCT
GGCACGGTCGAGGGCGAAGTGCTTAGCCACCAATTAGAAATTTATGAGGGCGGGCAATTTATCGGTCAGCGCATTATCGG
CCAAGAGTTGGAACATTTACCCGAGCTATTACAAACCTTAGCGCCAGAGGGCGCAGCTAAAAATACCAACACCGCTCAGA
CTAACGCCTTGTATGCTCGGGATAATCAGCCGGGTGCGCGCAAATGGTTGCCCTATGGCGCCGCCGCCGTTATTGTGCTG
GTCAGTGTCATAACACCAGCAAAGTTAACTACTTGGCTAAGCACCCTTGGTCAACCAGCGGCCATTACAGCAAATACTGC
GCAGGGCGATGCCCTGAATAGTGAAACTCTGCTGCAATCCCCCGTGAAAGATGACTCGCTCGCCAAGGATGGCGCTGTAG
CAAGCGATAACGACACGCAAACGGCTTCAGCCATGGCATTGGATAGCCACGATGGCAGCAATCCAGAACACCCAAGCGAA
GGGCATCCTAATATGGAGTCTGGCGCCGCAATGGAAGACTTAGCGCAAATGGAGCAAGGCCATGCCCAGATGTTACAACA
GGGCACGGCGAGCGATGTACCTAGCGGTAAACTCTAA

Upstream 100 bases:

>100_bases
AACCGACTCAAGTTAAATATCAAAGGAATCCAATGCTTTATTCTTCAGGCATTTTCACTTAACATCTTTTTCACAAAAAT
AATGATATGGAATTAAACCT

Downstream 100 bases:

>100_bases
AAATTAATCGTTTACTTTGACCACCTCTAGCTGCCAGCCCGGCAGCTTATGGGTGAGGTCGGCCGTTATCCTATCGACAT
CCCCCCGTAAAATCACCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MGSKGNGVTFISASTSIEGEMQLVGTALVAGKLAGNIRCAGQIKIELGGEVSGELSCDELKVCGVFRGKVRCNKLVIVSS
GTVEGEVLSHQLEIYEGGQFIGQRIIGQELEHLPELLQTLAPEGAAKNTNTAQTNALYARDNQPGARKWLPYGAAAVIVL
VSVITPAKLTTWLSTLGQPAAITANTAQGDALNSETLLQSPVKDDSLAKDGAVASDNDTQTASAMALDSHDGSNPEHPSE
GHPNMESGAAMEDLAQMEQGHAQMLQQGTASDVPSGKL

Sequences:

>Translated_278_residues
MGSKGNGVTFISASTSIEGEMQLVGTALVAGKLAGNIRCAGQIKIELGGEVSGELSCDELKVCGVFRGKVRCNKLVIVSS
GTVEGEVLSHQLEIYEGGQFIGQRIIGQELEHLPELLQTLAPEGAAKNTNTAQTNALYARDNQPGARKWLPYGAAAVIVL
VSVITPAKLTTWLSTLGQPAAITANTAQGDALNSETLLQSPVKDDSLAKDGAVASDNDTQTASAMALDSHDGSNPEHPSE
GHPNMESGAAMEDLAQMEQGHAQMLQQGTASDVPSGKL
>Mature_277_residues
GSKGNGVTFISASTSIEGEMQLVGTALVAGKLAGNIRCAGQIKIELGGEVSGELSCDELKVCGVFRGKVRCNKLVIVSSG
TVEGEVLSHQLEIYEGGQFIGQRIIGQELEHLPELLQTLAPEGAAKNTNTAQTNALYARDNQPGARKWLPYGAAAVIVLV
SVITPAKLTTWLSTLGQPAAITANTAQGDALNSETLLQSPVKDDSLAKDGAVASDNDTQTASAMALDSHDGSNPEHPSEG
HPNMESGAAMEDLAQMEQGHAQMLQQGTASDVPSGKL

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28861; Mature: 28730

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSKGNGVTFISASTSIEGEMQLVGTALVAGKLAGNIRCAGQIKIELGGEVSGELSCDEL
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCE
KVCGVFRGKVRCNKLVIVSSGTVEGEVLSHQLEIYEGGQFIGQRIIGQELEHLPELLQTL
EEHHEEECCEEEEEEEEEECCCCCHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHH
APEGAAKNTNTAQTNALYARDNQPGARKWLPYGAAAVIVLVSVITPAKLTTWLSTLGQPA
CCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCC
AITANTAQGDALNSETLLQSPVKDDSLAKDGAVASDNDTQTASAMALDSHDGSNPEHPSE
EEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCC
GHPNMESGAAMEDLAQMEQGHAQMLQQGTASDVPSGKL
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GSKGNGVTFISASTSIEGEMQLVGTALVAGKLAGNIRCAGQIKIELGGEVSGELSCDEL
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCE
KVCGVFRGKVRCNKLVIVSSGTVEGEVLSHQLEIYEGGQFIGQRIIGQELEHLPELLQTL
EEHHEEECCEEEEEEEEEECCCCCHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHH
APEGAAKNTNTAQTNALYARDNQPGARKWLPYGAAAVIVLVSVITPAKLTTWLSTLGQPA
CCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCC
AITANTAQGDALNSETLLQSPVKDDSLAKDGAVASDNDTQTASAMALDSHDGSNPEHPSE
EEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCC
GHPNMESGAAMEDLAQMEQGHAQMLQQGTASDVPSGKL
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA