Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117919201

Identifier: 117919201

GI number: 117919201

Start: 869056

End: 869490

Strand: Direct

Name: 117919201

Synonym: Shewana3_0749

Alternate gene names: NA

Gene position: 869056-869490 (Clockwise)

Preceding gene: 117919200

Following gene: 117919206

Centisome position: 17.48

GC content: 48.74

Gene sequence:

>435_bases
ATGGCTGAAGTATCAGTTGAGTATCGTGAAACCGCCGAGCGGATTTCCCACAATGTTGCCAATAAAGTGCTACCTATGGC
AAAAATGCCAGAGAGTCTGTTAGCGGCTTACCAAGGTTTATGTGCCGAGTTGTTACTCGATCGCGAAGACAAATTTGCCA
CGGCTTGGGAAGCATTACCCGCCAGTGCGCGCAATTTAATGCCGCAGGCTGAGTTCCATGGTTTTTATATTGCCAATGCG
TGGTTGCAACTTAGCCGTGTCGCCCAGGAGATTTCTGAGCAGGCCGATACCGATGAGGCCATCAATGAGAATGAGTACAA
CGGTATTTTCGGTCGCTTAGCCGATGAGTCACTGAAAGAGTGCGTGCGGAAATTAAAGAAAGCGCGTACTGACCGTTCTA
TGCTCAACAGCTTTAAACAGGTGATGGCGCCTTAA

Upstream 100 bases:

>100_bases
GCCCTATAAAGGGATCACAGTGACACCTTTGGCCCATAATGGGGTCTATGGTTTATATATTAGTGGCCAATTTTGAGCCG
CTTAGGATAAGAGAGTTATT

Downstream 100 bases:

>100_bases
GCTGTGAGTTTGACCCAATAAAAAGCCCGTCGATTGACGGGCTTTTTATTGGAATAATGTCTGATATTAGAAAGACGTAC
GCTTATAACGGCGATACTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MAEVSVEYRETAERISHNVANKVLPMAKMPESLLAAYQGLCAELLLDREDKFATAWEALPASARNLMPQAEFHGFYIANA
WLQLSRVAQEISEQADTDEAINENEYNGIFGRLADESLKECVRKLKKARTDRSMLNSFKQVMAP

Sequences:

>Translated_144_residues
MAEVSVEYRETAERISHNVANKVLPMAKMPESLLAAYQGLCAELLLDREDKFATAWEALPASARNLMPQAEFHGFYIANA
WLQLSRVAQEISEQADTDEAINENEYNGIFGRLADESLKECVRKLKKARTDRSMLNSFKQVMAP
>Mature_143_residues
AEVSVEYRETAERISHNVANKVLPMAKMPESLLAAYQGLCAELLLDREDKFATAWEALPASARNLMPQAEFHGFYIANAW
LQLSRVAQEISEQADTDEAINENEYNGIFGRLADESLKECVRKLKKARTDRSMLNSFKQVMAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16268; Mature: 16136

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEVSVEYRETAERISHNVANKVLPMAKMPESLLAAYQGLCAELLLDREDKFATAWEALP
CCCCCHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ASARNLMPQAEFHGFYIANAWLQLSRVAQEISEQADTDEAINENEYNGIFGRLADESLKE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHH
CVRKLKKARTDRSMLNSFKQVMAP
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AEVSVEYRETAERISHNVANKVLPMAKMPESLLAAYQGLCAELLLDREDKFATAWEALP
CCCCHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ASARNLMPQAEFHGFYIANAWLQLSRVAQEISEQADTDEAINENEYNGIFGRLADESLKE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHH
CVRKLKKARTDRSMLNSFKQVMAP
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA