Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_008577 |
Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117919200
Identifier: 117919200
GI number: 117919200
Start: 868504
End: 869031
Strand: Direct
Name: 117919200
Synonym: Shewana3_0748
Alternate gene names: NA
Gene position: 868504-869031 (Clockwise)
Preceding gene: 117919198
Following gene: 117919201
Centisome position: 17.47
GC content: 50.76
Gene sequence:
>528_bases TTGAAAAAATTACTCTGTGCCGTCCTGTTGCTGTTTACGGGAGCGAGTTGGGCAAACTCGGATGATATCGAAACCTCGGG CGATGTGGTTCATCTACTCCTGCCAGCGACGGCTTTGGGCGCGACCCTATTCTATGAAGAGGGGAATGAAGGCTCGTGGC AATTACTTAAAGCAGCAGTCTCGAGCAGGGTCATAGTCGAAGGGCTCAAACTGGGTGTCAGTAAGGATAGACCCGATGGC AGTGGTGATGATTCTTTTCCGTCAGGGCACACCTCGGACAGCTTTATGGCGGCCACGTTTATTCAGCAGCGTTATGGCTG GCAATATGGTCTGCCTGCCTATCTTGCCGCAACTTATGTGGGCTACACCCGAGTCGAGAGTGATAAGCACTATTTAGAAG ATGTGCTCGCAGGCGCAGCCATTGGCGCACTGGCGGGTTGGTATTTTACTGAGCCCTATAAAGGGATCACAGTGACACCT TTGGCCCATAATGGGGTCTATGGTTTATATATTAGTGGCCAATTTTGA
Upstream 100 bases:
>100_bases CTTTTTACGTCTTGTTTACATGTAAAGTTTGCAATTTTTGCATTCATTCCACTATCAAGGTATAAACGTCGCCTTGGATC TCACCCAATAAGGAAACCCT
Downstream 100 bases:
>100_bases GCCGCTTAGGATAAGAGAGTTATTATGGCTGAAGTATCAGTTGAGTATCGTGAAACCGCCGAGCGGATTTCCCACAATGT TGCCAATAAAGTGCTACCTA
Product: phosphoesterase, PA-phosphatase related
Products: NA
Alternate protein names: PAP2 Family Protein; Membrane-Associated Phospholipid Phosphatase; Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Family Phosphoesterase; Phosphoesterase PA-Phosphatase Related Protein; Phosphoesterase; Membrane-Associated Phosphoesterase; Phosphoesterase PAP2 Family; Secreted PAP2 Superfamily Protein; PAP2 Superfamily Protein; PAP2 Superfamily Membrane Protein
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKKLLCAVLLLFTGASWANSDDIETSGDVVHLLLPATALGATLFYEEGNEGSWQLLKAAVSSRVIVEGLKLGVSKDRPDG SGDDSFPSGHTSDSFMAATFIQQRYGWQYGLPAYLAATYVGYTRVESDKHYLEDVLAGAAIGALAGWYFTEPYKGITVTP LAHNGVYGLYISGQF
Sequences:
>Translated_175_residues MKKLLCAVLLLFTGASWANSDDIETSGDVVHLLLPATALGATLFYEEGNEGSWQLLKAAVSSRVIVEGLKLGVSKDRPDG SGDDSFPSGHTSDSFMAATFIQQRYGWQYGLPAYLAATYVGYTRVESDKHYLEDVLAGAAIGALAGWYFTEPYKGITVTP LAHNGVYGLYISGQF >Mature_175_residues MKKLLCAVLLLFTGASWANSDDIETSGDVVHLLLPATALGATLFYEEGNEGSWQLLKAAVSSRVIVEGLKLGVSKDRPDG SGDDSFPSGHTSDSFMAATFIQQRYGWQYGLPAYLAATYVGYTRVESDKHYLEDVLAGAAIGALAGWYFTEPYKGITVTP LAHNGVYGLYISGQF
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18841; Mature: 18841
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLCAVLLLFTGASWANSDDIETSGDVVHLLLPATALGATLFYEEGNEGSWQLLKAAV CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHCEEEEEECCCCCHHHHHHHHH SSRVIVEGLKLGVSKDRPDGSGDDSFPSGHTSDSFMAATFIQQRYGWQYGLPAYLAATYV HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH GYTRVESDKHYLEDVLAGAAIGALAGWYFTEPYKGITVTPLAHNGVYGLYISGQF HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCC >Mature Secondary Structure MKKLLCAVLLLFTGASWANSDDIETSGDVVHLLLPATALGATLFYEEGNEGSWQLLKAAV CHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHCEEEEEECCCCCHHHHHHHHH SSRVIVEGLKLGVSKDRPDGSGDDSFPSGHTSDSFMAATFIQQRYGWQYGLPAYLAATYV HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH GYTRVESDKHYLEDVLAGAAIGALAGWYFTEPYKGITVTPLAHNGVYGLYISGQF HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA