Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117919176

Identifier: 117919176

GI number: 117919176

Start: 840761

End: 841456

Strand: Direct

Name: 117919176

Synonym: Shewana3_0724

Alternate gene names: NA

Gene position: 840761-841456 (Clockwise)

Preceding gene: 117919175

Following gene: 117919178

Centisome position: 16.91

GC content: 48.56

Gene sequence:

>696_bases
ATGGCCACGTCTGCCCAAGCGGCTACTGTGGTTGGATTCAAAATTGGTGGTGATTACTGGCGCGCCGATACCAGCGGTAC
TTTTGCCGACAAAGGTCAACCACAACAAGGTTTTGACTACAGCTCATCGGCACAAGGCAGCTATTGGGTTGCGGTTGAGC
ATCCGCTGCCATTTATCCCAAATCTTAAAATTCGTGAAAATAGCTTAGATCAGAAGGGCAGTCTGGCCAATGCTGACTTC
AGCTTCAATGGCCATGATTTTACTGGTAATGTGACCAGCTATACCGATCTGAGCAACACCGATTTTGTGCTGTATTACGA
GTTGCTGGATAACGATATTCTGTCTTTGGATCTCGGTGCTGCCTACAAGCTGATGAATGGTTCTCTGCGCGTTCAAGATG
CGGGTCACCCTGAAGAGAAAGACGTTGATAGCGGCATTGTGATGGGTTATGCCAGCACACACGTGAGCATGCCAGGCCTT
GGGTTATTCGGCTTTGCGGATTTAATGCTTGGGGTAAACGAGTCTAACGTACACGACTATGCTATCGGCTTAGGTTGGGA
GTTTGACGGCGTGGCGGTGGATACCCGTGTACGCGTTGGCTACCGTGAGTTTGCCTTCGATGTGAACAACTTCTCAGGTA
TCAGTGCTGATACTAAGTTTGACGGTTATTTCGCCGGTGTAGAAATTGATTTCTAA

Upstream 100 bases:

>100_bases
TGTCCCGTGCGAATGCCGCGGTGATTGATTTAACGAACTTGCTATCTCAAGGTTAATTATGAAAAAAACACTCCTCGCCA
GTGCGGTATTAGGATGCTTA

Downstream 100 bases:

>100_bases
GCGCTAGCGCTAATGAATCAGCCATAAAAAAACCGCCATTAAGGCGGTTTTTTTATGGGAGGTATTGCTATCTTATTCGG
CTTTTAGACCGTTGTTGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MATSAQAATVVGFKIGGDYWRADTSGTFADKGQPQQGFDYSSSAQGSYWVAVEHPLPFIPNLKIRENSLDQKGSLANADF
SFNGHDFTGNVTSYTDLSNTDFVLYYELLDNDILSLDLGAAYKLMNGSLRVQDAGHPEEKDVDSGIVMGYASTHVSMPGL
GLFGFADLMLGVNESNVHDYAIGLGWEFDGVAVDTRVRVGYREFAFDVNNFSGISADTKFDGYFAGVEIDF

Sequences:

>Translated_231_residues
MATSAQAATVVGFKIGGDYWRADTSGTFADKGQPQQGFDYSSSAQGSYWVAVEHPLPFIPNLKIRENSLDQKGSLANADF
SFNGHDFTGNVTSYTDLSNTDFVLYYELLDNDILSLDLGAAYKLMNGSLRVQDAGHPEEKDVDSGIVMGYASTHVSMPGL
GLFGFADLMLGVNESNVHDYAIGLGWEFDGVAVDTRVRVGYREFAFDVNNFSGISADTKFDGYFAGVEIDF
>Mature_230_residues
ATSAQAATVVGFKIGGDYWRADTSGTFADKGQPQQGFDYSSSAQGSYWVAVEHPLPFIPNLKIRENSLDQKGSLANADFS
FNGHDFTGNVTSYTDLSNTDFVLYYELLDNDILSLDLGAAYKLMNGSLRVQDAGHPEEKDVDSGIVMGYASTHVSMPGLG
LFGFADLMLGVNESNVHDYAIGLGWEFDGVAVDTRVRVGYREFAFDVNNFSGISADTKFDGYFAGVEIDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25106; Mature: 24975

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSAQAATVVGFKIGGDYWRADTSGTFADKGQPQQGFDYSSSAQGSYWVAVEHPLPFIP
CCCCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
NLKIRENSLDQKGSLANADFSFNGHDFTGNVTSYTDLSNTDFVLYYELLDNDILSLDLGA
CCEEECCCCCCCCCCCCCEEECCCCEEECCCEEEECCCCCCEEEEEEHHCCCEEEEECCC
AYKLMNGSLRVQDAGHPEEKDVDSGIVMGYASTHVSMPGLGLFGFADLMLGVNESNVHDY
EEEEECCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCEEE
AIGLGWEFDGVAVDTRVRVGYREFAFDVNNFSGISADTKFDGYFAGVEIDF
EEEECCEECCEEEEEEEEECEEEEEEECCCCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure 
ATSAQAATVVGFKIGGDYWRADTSGTFADKGQPQQGFDYSSSAQGSYWVAVEHPLPFIP
CCCCCEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
NLKIRENSLDQKGSLANADFSFNGHDFTGNVTSYTDLSNTDFVLYYELLDNDILSLDLGA
CCEEECCCCCCCCCCCCCEEECCCCEEECCCEEEECCCCCCEEEEEEHHCCCEEEEECCC
AYKLMNGSLRVQDAGHPEEKDVDSGIVMGYASTHVSMPGLGLFGFADLMLGVNESNVHDY
EEEEECCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCEEE
AIGLGWEFDGVAVDTRVRVGYREFAFDVNNFSGISADTKFDGYFAGVEIDF
EEEECCEECCEEEEEEEEECEEEEEEECCCCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA